RNA–Protein interactions for RNA: YPL116W

HOS3, Transcript of Trichostatin A-insensitive homodimeric histone deacetylase (HDAC), yeast

Gene HOS3, Length 2,094 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOS3	YPL116W	YLL007C	Q07799	665 aa		4.16	□□□□□ -1.74
HOS3	YPL116W	DIN7	Q12086	430 aa		4.16	□□□□□ -1.74
HOS3	YPL116W	SNU23	Q12368	194 aa	Predicted RBP	4.16	□□□□□ -1.74
HOS3	YPL116W	RAD61	Q99359	647 aa		4.16	□□□□□ -1.74
HOS3	YPL116W	DNF1	P32660	1571 aa		4.16	□□□□□ -1.74
HOS3	YPL116W	RPA190	P10964	1664 aa	Known RBP	4.16	□□□□□ -1.74
HOS3	YPL116W	SSM4	P40318	1319 aa		4.16	□□□□□ -1.74
HOS3	YPL116W	CBP6	P07253	162 aa	Predicted RBP	4.15	□□□□□ -1.74
HOS3	YPL116W	CHS1	P08004	1131 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	not detected
HOS3	YPL116W	DAL7	P21826	554 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	AEP2	P22136	580 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	URE2	P23202	354 aa	Known RBP	4.15	□□□□□ -1.74
HOS3	YPL116W	PAT1	P25644	796 aa	Known RBP	4.15	□□□□□ -1.74
HOS3	YPL116W	SEC1	P30619	724 aa	Known RBP	4.15	□□□□□ -1.74
HOS3	YPL116W	FUN30	P31380	1131 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	DBF20	P32328	564 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	SQT1	P35184	431 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	RMA1	P36001	430 aa	Known RBP	4.15	□□□□□ -1.74
HOS3	YPL116W	MMS4	P38257	691 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	FES1	P38260	290 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	RIM4	P38741	713 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	OSH7	P38755	437 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	CCC2	P38995	1004 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	DDI1	P40087	428 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	ELP2	P42935	788 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	FAR7	P43592	221 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	SPO74	P45819	413 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	not detected
HOS3	YPL116W	LIA1	P47120	325 aa	Known RBP	4.15	□□□□□ -1.74
HOS3	YPL116W	ASE1	P50275	885 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	CNM67	P53865	581 aa	Known RBP	4.15	□□□□□ -1.74
HOS3	YPL116W	MUK1	Q02866	612 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	GCN5	Q03330	439 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	SPR28	Q04921	423 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	STE23	Q06010	1027 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	RGC1	Q06108	1083 aa	Known RBP	4.15	□□□□□ -1.74
HOS3	YPL116W	RRG1	Q12167	365 aa	Predicted RBP	4.15	□□□□□ -1.74
HOS3	YPL116W	HOS1	Q12214	470 aa		4.15	□□□□□ -1.74
HOS3	YPL116W	RVB2	Q12464	471 aa	Known RBP	4.15	□□□□□ -1.74
HOS3	YPL116W	CHS2	P14180	963 aa		4.15	□□□□□ -1.75
HOS3	YPL116W	FUR1	P18562	216 aa	Known RBP	4.15	□□□□□ -1.75
HOS3	YPL116W	UTR1	P21373	530 aa		4.15	□□□□□ -1.75
HOS3	YPL116W	DAL81	P21657	970 aa		4.15	□□□□□ -1.75
HOS3	YPL116W	GIT1	P25346	518 aa		4.15	□□□□□ -1.75
HOS3	YPL116W	SUV3	P32580	737 aa		4.15	□□□□□ -1.75
HOS3	YPL116W	DHR2	P36009	735 aa	Predicted RBP	4.15	□□□□□ -1.75
HOS3	YPL116W	GIM4	P40005	111 aa	Known RBP	4.15	□□□□□ -1.75
HOS3	YPL116W	RMR1	P53060	241 aa		4.15	□□□□□ -1.75
HOS3	YPL116W	LCL3	P53153	274 aa		4.15	□□□□□ -1.75
HOS3	YPL116W	CAF120	P53836	1060 aa		4.15	□□□□□ -1.75
HOS3	YPL116W	GLO2	Q05584	274 aa		4.15	□□□□□ -1.75
HOS3	YPL116W	YLR345W	Q06137	509 aa		4.15	□□□□□ -1.75
HOS3	YPL116W	SSP2	Q08646	371 aa		4.15	□□□□□ -1.75
HOS3	YPL116W	UIP4	Q08926	304 aa		4.15	□□□□□ -1.75
HOS3	YPL116W	PSF3	Q12146	194 aa		4.15	□□□□□ -1.75
HOS3	YPL116W	SIR4	P11978	1358 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	PHO5	P00635	467 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	WHI2	P12611	486 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	YAK1	P14680	807 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	GCN3	P14741	305 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	CDC42	P19073	191 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	PRP2	P20095	876 aa	Predicted RBP	4.14	□□□□□ -1.75
HOS3	YPL116W	VMA16	P23968	213 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	DBP2	P24783	546 aa	Known RBP	4.14	□□□□□ -1.75
HOS3	YPL116W	GRR1	P24814	1151 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	PAH1	P32567	862 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	TPO5	P36029	618 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	RCN1	P36054	211 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	YBR225W	P38321	900 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	PCL6	P40038	420 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	PIG2	P40187	538 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	ICE2	P40499	491 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	CCT8	P47079	568 aa	Known RBP	4.14	□□□□□ -1.75
HOS3	YPL116W	YKE2	P52553	114 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	PIP2	P52960	996 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	RCF2	P53721	224 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	PRO2	P54885	456 aa	Known RBP	4.14	□□□□□ -1.75
HOS3	YPL116W	ACS1	Q01574	713 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	PKH3	Q03306	898 aa	Predicted RBP	4.14	□□□□□ -1.75
HOS3	YPL116W	GIM5	Q04493	163 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	SPO77	Q06134	477 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	KAP95	Q06142	861 aa	Known RBP	4.14	□□□□□ -1.75
HOS3	YPL116W	SGT1	Q08446	395 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	ESA1	Q08649	445 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	AKR2	Q12013	749 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	MED2	Q12124	431 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	GIS3	Q12418	502 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	YCL001W-B	Q96VH2	84 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	RPS17A	P02407	136 aa	Known RBP	4.14	□□□□□ -1.75
HOS3	YPL116W	RPS24A	P0CX31	135 aa	Known RBP	4.14	□□□□□ -1.75
HOS3	YPL116W	RPS24B	P0CX32	135 aa	Known RBP	4.14	□□□□□ -1.75
HOS3	YPL116W	SBP1	P10080	294 aa	Known RBP	4.14	□□□□□ -1.75
HOS3	YPL116W	SST2	P11972	698 aa	Known RBP	4.14	□□□□□ -1.75
HOS3	YPL116W	SRS2	P12954	1174 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	RPS17B	P14127	136 aa	Known RBP	4.14	□□□□□ -1.75
HOS3	YPL116W	MIP1	P15801	1254 aa		4.14	□□□□□ -1.75
HOS3	YPL116W	SWI4	P25302	1093 aa	Known RBP	4.14	□□□□□ -1.75
HOS3	YPL116W	PRP40	P33203	583 aa	Known RBP	4.14	□□□□□ -1.75
HOS3	YPL116W	KTR2	P33550	425 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms