RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W ADE4P04046 510 aaKnown RBP3.77□□□□□ -1.81
MSD1YPL104W LEU1P07264 779 aaKnown RBP3.77□□□□□ -1.81
MSD1YPL104W PRR1P28708 518 aa3.77□□□□□ -1.81
MSD1YPL104W EFB1P32471 206 aaKnown RBP3.77□□□□□ -1.81
MSD1YPL104W BUD2P33314 1104 aa3.77□□□□□ -1.81
MSD1YPL104W FUI1P38196 639 aa3.77□□□□□ -1.81
MSD1YPL104W APM2P38700 605 aa3.77□□□□□ -1.81
MSD1YPL104W NMD5P46970 1048 aa3.77□□□□□ -1.81
MSD1YPL104W ZAP1P47043 880 aa3.77□□□□□ -1.81
MSD1YPL104W YJR054WP47114 497 aa3.77□□□□□ -1.81
MSD1YPL104W PMT3P47190 753 aa3.77□□□□□ -1.81
MSD1YPL104W MAL11P53048 616 aa3.77□□□□□ -1.81
MSD1YPL104W YGL036WP53185 909 aaPredicted RBP3.77□□□□□ -1.81
MSD1YPL104W NOG2P53742 486 aaKnown RBP3.77□□□□□ -1.81
MSD1YPL104W IVY1Q04934 453 aa3.77□□□□□ -1.81
MSD1YPL104W STE23Q06010 1027 aa3.77□□□□□ -1.81
MSD1YPL104W THI73Q07904 523 aa3.77□□□□□ -1.81
MSD1YPL104W YOR378WQ08902 515 aa3.77□□□□□ -1.81
MSD1YPL104W SUT2Q12286 268 aa3.77□□□□□ -1.81
MSD1YPL104W BI3Q9ZZW7 517 aa3.77□□□□□ -1.81
MSD1YPL104W KAR3P17119 729 aa3.76□□□□□ -1.81
MSD1YPL104W SFL1P20134 766 aa3.76□□□□□ -1.81
MSD1YPL104W TRX2P22803 104 aaKnown RBP3.76□□□□□ -1.81
MSD1YPL104W MSH1P25846 959 aa3.76□□□□□ -1.81
MSD1YPL104W PLC1P32383 869 aa3.76□□□□□ -1.81
MSD1YPL104W NOP4P37838 685 aaKnown RBP3.76□□□□□ -1.81
MSD1YPL104W YMC2P38087 329 aa3.76□□□□□ -1.81
MSD1YPL104W PCA1P38360 1216 aa3.76□□□□□ -1.81
MSD1YPL104W MSG5P38590 489 aa3.76□□□□□ -1.81
MSD1YPL104W YAP1801P38856 637 aa3.76□□□□□ -1.81
MSD1YPL104W TMN3P40071 706 aa3.76□□□□□ -1.81
MSD1YPL104W YER186CP40101 306 aa3.76□□□□□ -1.81
MSD1YPL104W YGL176CP46945 554 aa3.76□□□□□ -1.81
MSD1YPL104W ALT1P52893 592 aa3.76□□□□□ -1.81
MSD1YPL104W NOP13P53883 403 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
MSD1YPL104W GPD1Q00055 391 aaKnown RBP3.76□□□□□ -1.81
MSD1YPL104W SNU56Q03782 492 aaKnown RBP3.76□□□□□ -1.81
MSD1YPL104W HED1Q03937 162 aa3.76□□□□□ -1.81
MSD1YPL104W SND1Q04007 877 aa3.76□□□□□ -1.81
MSD1YPL104W GIC2Q06648 383 aa3.76□□□□□ -1.81
MSD1YPL104W YOR059CQ08448 450 aaKnown RBP3.76□□□□□ -1.81
MSD1YPL104W YPR027CQ12079 277 aa3.76□□□□□ -1.81
MSD1YPL104W JIP3O13555 125 aa3.76□□□□□ -1.81
MSD1YPL104W SPO16P17122 198 aa3.76□□□□□ -1.81
MSD1YPL104W EST1P17214 699 aaPredicted RBP3.76□□□□□ -1.81
MSD1YPL104W SAT4P25333 603 aaKnown RBP3.76□□□□□ -1.81
MSD1YPL104W SEC1P30619 724 aaKnown RBP3.76□□□□□ -1.81
MSD1YPL104W MRP4P32902 394 aa3.76□□□□□ -1.81
MSD1YPL104W DRE2P36152 348 aa3.76□□□□□ -1.81
MSD1YPL104W CCL1P37366 393 aa3.76□□□□□ -1.81
MSD1YPL104W PCM1P38628 557 aaKnown RBP3.76□□□□□ -1.81
MSD1YPL104W SHU2P38957 223 aa3.76□□□□□ -1.81
MSD1YPL104W DSS1P39112 969 aa3.76□□□□□ -1.81
MSD1YPL104W AFG3P39925 761 aa3.76□□□□□ -1.81
MSD1YPL104W YMR134WP40207 237 aa3.76□□□□□ -1.81
MSD1YPL104W AAD14P42884 376 aa3.76□□□□□ -1.81
MSD1YPL104W SNZ3P43545 298 aa3.76□□□□□ -1.81
MSD1YPL104W CTK3P46963 296 aaPredicted RBP3.76□□□□□ -1.81
MSD1YPL104W AZR1P50080 613 aa3.76□□□□□ -1.81
MSD1YPL104W INP52P50942 1183 aa3.76□□□□□ -1.81
MSD1YPL104W YML6P51998 286 aa3.76□□□□□ -1.81
MSD1YPL104W SKP1P52286 194 aa3.76□□□□□ -1.81
MSD1YPL104W NCS6P53088 359 aa3.76□□□□□ -1.81
MSD1YPL104W MND1P53102 219 aa3.76□□□□□ -1.81
MSD1YPL104W YGR130CP53278 816 aa3.76□□□□□ -1.81
MSD1YPL104W SNZ2P53824 298 aa3.76□□□□□ -1.81
MSD1YPL104W YNL134CP53912 376 aaKnown RBP3.76□□□□□ -1.81
MSD1YPL104W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
MSD1YPL104W MRS2Q01926 470 aa3.76□□□□□ -1.81
MSD1YPL104W MUK1Q02866 612 aa3.76□□□□□ -1.81
MSD1YPL104W MZM1Q03429 123 aaPredicted RBP3.76□□□□□ -1.81
MSD1YPL104W ARO80Q04052 950 aa3.76□□□□□ -1.81
MSD1YPL104W TIF35Q04067 274 aaKnown RBP3.76□□□□□ -1.81
MSD1YPL104W SXM1Q04175 944 aaKnown RBP3.76□□□□□ -1.81
MSD1YPL104W DNL4Q08387 944 aaPredicted RBP3.76□□□□□ -1.81
MSD1YPL104W MET32Q12041 191 aa3.76□□□□□ -1.81
MSD1YPL104W MDM20Q12387 796 aaKnown RBP3.76□□□□□ -1.81
MSD1YPL104W PCD1Q12524 340 aa3.76□□□□□ -1.81
MSD1YPL104W TMA7Q3E764 64 aaKnown RBP3.76□□□□□ -1.81
MSD1YPL104W HBN1Q96VH4 193 aa3.76□□□□□ -1.81
MSD1YPL104W TOM1Q03280 3268 aa3.75□□□□□ -1.81
MSD1YPL104W ARG4P04076 463 aaPredicted RBP3.75□□□□□ -1.81
MSD1YPL104W CHS1P08004 1131 aa3.75□□□□□ -1.81
MSD1YPL104W TUB3P09734 445 aaKnown RBP3.75□□□□□ -1.81
MSD1YPL104W ADH4P10127 382 aa3.75□□□□□ -1.81
MSD1YPL104W TOP3P13099 656 aa3.75□□□□□ -1.81
MSD1YPL104W MEF1P25039 761 aa3.75□□□□□ -1.81
MSD1YPL104W VBA3P25594 458 aa3.75□□□□□ -1.81
MSD1YPL104W MKK2P32491 506 aa3.75□□□□□ -1.81
MSD1YPL104W YKL107WP34251 309 aa3.75□□□□□ -1.81
MSD1YPL104W RPC37P36121 282 aa3.75□□□□□ -1.81
MSD1YPL104W RDH54P38086 958 aa3.75□□□□□ -1.81
MSD1YPL104W YBR284WP38150 797 aa3.75□□□□□ -1.81
MSD1YPL104W VHC1P38329 1120 aa3.75□□□□□ -1.81
MSD1YPL104W RGD1P38339 666 aa3.75□□□□□ -1.81
MSD1YPL104W QNS1P38795 714 aaKnown RBP3.75□□□□□ -1.81
MSD1YPL104W VPS41P38959 992 aa3.75□□□□□ -1.81
MSD1YPL104W ALD5P40047 520 aaKnown RBP3.75□□□□□ -1.81
MSD1YPL104W KHA1P40309 873 aa3.75□□□□□ -1.81
MSD1YPL104W INP51P40559 946 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms