RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C CBP3P21560 335 aa3.65□□□□□ -1.83
HRD1YOL013C MCM3P24279 971 aaKnown RBP3.65□□□□□ -1.83
HRD1YOL013C CLB4P24871 460 aa3.65□□□□□ -1.83
HRD1YOL013C SSZ1P38788 538 aaKnown RBP3.65□□□□□ -1.83
HRD1YOL013C PPE1P38796 400 aa3.65□□□□□ -1.83
HRD1YOL013C YEL076CP39971 216 aa3.65□□□□□ -1.83
HRD1YOL013C PSF2P40359 213 aa3.65□□□□□ -1.83
HRD1YOL013C ATP22P50273 684 aaPredicted RBP3.65□□□□□ -1.83
HRD1YOL013C GND2P53319 492 aa3.65□□□□□ -1.83
HRD1YOL013C NOP15P53927 220 aaPredicted RBP3.65□□□□□ -1.83
HRD1YOL013C ORC4P54791 529 aa3.65□□□□□ -1.83
HRD1YOL013C YLR407WQ06070 228 aa3.65□□□□□ -1.83
HRD1YOL013C IRC13Q08630 104 aa3.65□□□□□ -1.83
HRD1YOL013C PSF3Q12146 194 aa3.65□□□□□ -1.83
HRD1YOL013C PCD1Q12524 340 aa3.65□□□□□ -1.83
HRD1YOL013C PHO5P00635 467 aa3.64□□□□□ -1.83
HRD1YOL013C VAS1P07806 1104 aaKnown RBP3.64□□□□□ -1.83
HRD1YOL013C ILS1P09436 1072 aaKnown RBP3.64□□□□□ -1.83
HRD1YOL013C RED1P14291 827 aa3.64□□□□□ -1.83
HRD1YOL013C HIS7P33734 552 aaKnown RBP3.64□□□□□ -1.83
HRD1YOL013C SDS22P36047 338 aa3.64□□□□□ -1.83
HRD1YOL013C SDS3P40505 327 aa3.64□□□□□ -1.83
HRD1YOL013C MAD2P40958 196 aa3.64□□□□□ -1.83
HRD1YOL013C SET2P46995 733 aaKnown RBP3.64□□□□□ -1.83
HRD1YOL013C PRP31P49704 494 aaPredicted RBP3.64□□□□□ -1.83
HRD1YOL013C CTF18P49956 741 aa3.64□□□□□ -1.83
HRD1YOL013C YML6P51998 286 aa3.64□□□□□ -1.83
HRD1YOL013C HOS2P53096 452 aaPredicted RBP3.64□□□□□ -1.83
HRD1YOL013C VTI1Q04338 217 aa3.64□□□□□ -1.83
HRD1YOL013C SGO1Q08490 590 aa3.64□□□□□ -1.83
HRD1YOL013C DIN7Q12086 430 aa3.64□□□□□ -1.83
HRD1YOL013C ARG3P05150 338 aa3.63□□□□□ -1.83
HRD1YOL013C FUM1P08417 488 aaKnown RBP3.63□□□□□ -1.83
HRD1YOL013C POL3P15436 1097 aa3.63□□□□□ -1.83
HRD1YOL013C OLE1P21147 510 aaKnown RBP3.63□□□□□ -1.83
HRD1YOL013C SGF29P25554 259 aa3.63□□□□□ -1.83
HRD1YOL013C ERG3P32353 365 aa3.63□□□□□ -1.83
HRD1YOL013C CBF2P32504 956 aa3.63□□□□□ -1.83
HRD1YOL013C NPL6P32832 435 aa3.63□□□□□ -1.83
HRD1YOL013C RPT3P33298 428 aaKnown RBP3.63□□□□□ -1.83
HRD1YOL013C ESL2P36168 1195 aa3.63□□□□□ -1.83
HRD1YOL013C SRP68P38687 599 aaKnown RBP3.63□□□□□ -1.83
HRD1YOL013C BEM4P39011 633 aa3.63□□□□□ -1.83
HRD1YOL013C YJR039WP47107 1121 aa3.63□□□□□ -1.83
HRD1YOL013C TEX1P53851 422 aaKnown RBP3.63□□□□□ -1.83
HRD1YOL013C YPS7Q06325 596 aa3.63□□□□□ -1.83
HRD1YOL013C VHS3Q08438 674 aa3.63□□□□□ -1.83
HRD1YOL013C DBP10Q12389 995 aaKnown RBP3.63□□□□□ -1.83
HRD1YOL013C RPS17AP02407 136 aaKnown RBP3.62□□□□□ -1.83
HRD1YOL013C RPS17BP14127 136 aaKnown RBP3.62□□□□□ -1.83
HRD1YOL013C CKA1P15790 372 aa3.62□□□□□ -1.83
HRD1YOL013C PDX1P16451 410 aa3.62□□□□□ -1.83
HRD1YOL013C SAS3P34218 831 aa3.62□□□□□ -1.83
HRD1YOL013C APT2P36973 181 aa3.62□□□□□ -1.83
HRD1YOL013C PCL5P38794 229 aa3.62□□□□□ -1.83
HRD1YOL013C REV7P38927 245 aa3.62□□□□□ -1.83
HRD1YOL013C FMP52P40008 231 aa3.62□□□□□ -1.83
HRD1YOL013C MAM1P40065 302 aa3.62□□□□□ -1.83
HRD1YOL013C BAP3P41815 604 aa3.62□□□□□ -1.83
HRD1YOL013C UBC11P52492 156 aa3.62□□□□□ -1.83
HRD1YOL013C YDR131CQ03899 556 aa3.62□□□□□ -1.83
HRD1YOL013C CTK1Q03957 528 aaKnown RBP3.62□□□□□ -1.83
HRD1YOL013C YLR345WQ06137 509 aa3.62□□□□□ -1.83
HRD1YOL013C YCG1Q06680 1035 aa3.62□□□□□ -1.83
HRD1YOL013C CSR1Q06705 408 aaKnown RBP3.62□□□□□ -1.83
HRD1YOL013C ISA1Q07821 250 aaPredicted RBP3.62□□□□□ -1.83
HRD1YOL013C ADE3P07245 946 aaKnown RBP3.62□□□□□ -1.83
HRD1YOL013C CDC43P18898 376 aa3.62□□□□□ -1.83
HRD1YOL013C BET2P20133 325 aa3.62□□□□□ -1.83
HRD1YOL013C MF(ALPHA)2P32435 120 aa3.62□□□□□ -1.83
HRD1YOL013C MIP6P38760 659 aaKnown RBP3.62□□□□□ -1.83
HRD1YOL013C POP2P39008 433 aa3.62□□□□□ -1.83
HRD1YOL013C JEM1P40358 645 aa3.62□□□□□ -1.83
HRD1YOL013C SAP4P53036 818 aa3.62□□□□□ -1.83
HRD1YOL013C MNT2P53059 558 aa3.62□□□□□ -1.83
HRD1YOL013C CIR2Q08822 631 aa3.62□□□□□ -1.83
HRD1YOL013C YPL191CQ08930 360 aa3.62□□□□□ -1.83
HRD1YOL013C MRH1Q12117 320 aaPredicted RBP3.62□□□□□ -1.83
HRD1YOL013C SIR1P21691 654 aa3.61□□□□□ -1.83
HRD1YOL013C IMG2P25642 146 aaPredicted RBP3.61□□□□□ -1.83
HRD1YOL013C DGR2P32330 852 aa3.61□□□□□ -1.83
HRD1YOL013C AKL1P38080 1108 aaKnown RBP3.61□□□□□ -1.83
HRD1YOL013C FMP10P40098 244 aa3.61□□□□□ -1.83
HRD1YOL013C SAE2P46946 345 aa3.61□□□□□ -1.83
HRD1YOL013C BFA1P47113 574 aa3.61□□□□□ -1.83
HRD1YOL013C PSP1P50896 841 aaKnown RBP3.61□□□□□ -1.83
HRD1YOL013C TEL2P53038 688 aa3.61□□□□□ -1.83
HRD1YOL013C YNR071CP53757 342 aa3.61□□□□□ -1.83
HRD1YOL013C ARG5,6Q01217 863 aa3.61□□□□□ -1.83
HRD1YOL013C ACS1Q01574 713 aa3.61□□□□□ -1.83
HRD1YOL013C PRP3Q03338 469 aaPredicted RBP3.61□□□□□ -1.83
HRD1YOL013C STP4Q07351 490 aa3.61□□□□□ -1.83
HRD1YOL013C IWR1Q07532 353 aaPredicted RBP3.61□□□□□ -1.83
HRD1YOL013C SUI3P09064 285 aaKnown RBP3.6□□□□□ -1.83
HRD1YOL013C ADE2P21264 571 aaKnown RBP3.6□□□□□ -1.83
HRD1YOL013C RIT1P23796 513 aa3.6□□□□□ -1.83
HRD1YOL013C ROX1P25042 368 aa3.6□□□□□ -1.83
HRD1YOL013C DBF4P32325 704 aa3.6□□□□□ -1.83
HRD1YOL013C YPT53P36019 220 aa3.6□□□□□ -1.83
HRD1YOL013C CBR1P38626 284 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 116.5 ms