RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	ABZ1	P37254	787 aa	Predicted RBP	6.27	□□□□□ -1.41
CSL4	YNL232W	BAP2	P38084	609 aa		6.27	□□□□□ -1.41
CSL4	YNL232W	ALG3	P38179	458 aa		6.27	□□□□□ -1.41
CSL4	YNL232W	GGA2	P38817	585 aa	Known RBP	6.27	□□□□□ -1.41
CSL4	YNL232W	LAM1	P38851	1228 aa		6.27	□□□□□ -1.41
CSL4	YNL232W	SSB2	P40150	613 aa	Known RBP	6.27	□□□□□ -1.41
CSL4	YNL232W	NUP82	P40368	713 aa		6.27	□□□□□ -1.41
CSL4	YNL232W	YKE2	P52553	114 aa		6.27	□□□□□ -1.41
CSL4	YNL232W	ARP5	P53946	755 aa		6.27	□□□□□ -1.41
CSL4	YNL232W	HOS3	Q02959	697 aa	Known RBP	6.27	□□□□□ -1.41
CSL4	YNL232W	TAF10	Q12030	206 aa		6.27	□□□□□ -1.41
CSL4	YNL232W	SPO21	Q12411	609 aa		6.27	□□□□□ -1.41
CSL4	YNL232W	CYC1	P00044	109 aa	Predicted RBP	6.26	□□□□□ -1.41
CSL4	YNL232W	REV1	P12689	985 aa		6.26	□□□□□ -1.41
CSL4	YNL232W	CBP3	P21560	335 aa		6.26	□□□□□ -1.41
CSL4	YNL232W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	6.26	□□□□□ -1.41	not detected
CSL4	YNL232W	NUP60	P39705	539 aa		6.26	□□□□□ -1.41
CSL4	YNL232W	YIL161W	P40449	235 aa	Known RBP	6.26	□□□□□ -1.41
CSL4	YNL232W	KRI1	P42846	591 aa	Known RBP	6.26	□□□□□ -1.41
CSL4	YNL232W	SPT20	P50875	604 aa		6.26	□□□□□ -1.41
CSL4	YNL232W	CUE3	P53137	624 aa	Known RBP	6.26	□□□□□ -1.41
CSL4	YNL232W	TNA1	P53322	534 aa		6.26	□□□□□ -1.41
CSL4	YNL232W	TOF1	P53840	1238 aa		6.26	□□□□□ -1.41
CSL4	YNL232W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	6.26	□□□□□ -1.41	not detected
CSL4	YNL232W	CEG1	Q01159	459 aa	Predicted RBP	6.26	□□□□□ -1.41
CSL4	YNL232W	GCN5	Q03330	439 aa		6.26	□□□□□ -1.41
CSL4	YNL232W	WAR1	Q03631	944 aa		6.26	□□□□□ -1.41
CSL4	YNL232W	SEG1	Q04279	960 aa		6.26	□□□□□ -1.41
CSL4	YNL232W	PRM6	Q04705	352 aa		6.26	□□□□□ -1.41
CSL4	YNL232W	BI4	P03879	638 aa		6.25	□□□□□ -1.41
CSL4	YNL232W	SNF5	P18480	905 aa		6.25	□□□□□ -1.41
CSL4	YNL232W	ASF1	P32447	279 aa		6.25	□□□□□ -1.41
CSL4	YNL232W	TKL2	P33315	681 aa		6.25	□□□□□ -1.41
CSL4	YNL232W	AGP2	P38090	596 aa		6.25	□□□□□ -1.41
CSL4	YNL232W	CCZ1	P38273	704 aa		6.25	□□□□□ -1.41
CSL4	YNL232W	MEF2	P39677	819 aa		6.25	□□□□□ -1.41
CSL4	YNL232W	SMA1	Q02651	245 aa		6.25	□□□□□ -1.41
CSL4	YNL232W	UTP14	Q04500	899 aa	Known RBP	6.25	□□□□□ -1.41
CSL4	YNL232W	YLR407W	Q06070	228 aa		6.25	□□□□□ -1.41
CSL4	YNL232W	YOR352W	Q08816	343 aa		6.25	□□□□□ -1.41
CSL4	YNL232W	GPM2	Q12008	311 aa		6.25	□□□□□ -1.41
CSL4	YNL232W	SGT2	Q12118	346 aa	Known RBP	6.25	□□□□□ -1.41
CSL4	YNL232W	SRX1	P36077	127 aa		6.24	□□□□□ -1.41
CSL4	YNL232W	PET10	P36139	283 aa		6.24	□□□□□ -1.41
CSL4	YNL232W	UBP13	P38187	747 aa		6.24	□□□□□ -1.41
CSL4	YNL232W	WSC4	P38739	605 aa		6.24	□□□□□ -1.41
CSL4	YNL232W	PIK1	P39104	1066 aa		6.24	□□□□□ -1.41
CSL4	YNL232W	GDH3	P39708	457 aa		6.24	□□□□□ -1.41
CSL4	YNL232W	YER158C	P40095	573 aa		6.24	□□□□□ -1.41
CSL4	YNL232W	OSW5	P40219	148 aa		6.24	□□□□□ -1.41
CSL4	YNL232W	ERG10	P41338	398 aa	Known RBP	6.24	□□□□□ -1.41
CSL4	YNL232W	SEC26	P41810	973 aa	Known RBP	6.24	□□□□□ -1.41
CSL4	YNL232W	ROT1	Q03691	256 aa		6.24	□□□□□ -1.41
CSL4	YNL232W	CUR1	Q06469	252 aa		6.24	□□□□□ -1.41
CSL4	YNL232W	RSB1	Q08417	382 aa		6.24	□□□□□ -1.41
CSL4	YNL232W	GET3	Q12154	354 aa	Known RBP	6.24	□□□□□ -1.41
CSL4	YNL232W	HFA1	P32874	2273 aa		6.24	□□□□□ -1.41
CSL4	YNL232W	ALG1	P16661	449 aa		6.23	□□□□□ -1.41
CSL4	YNL232W	CKA2	P19454	339 aa		6.23	□□□□□ -1.41
CSL4	YNL232W	SFP1	P32432	683 aa		6.23	□□□□□ -1.41
CSL4	YNL232W	SHE3	P38272	425 aa	Known RBP	6.23	□□□□□ -1.41
CSL4	YNL232W	PLB2	Q03674	706 aa		6.23	□□□□□ -1.41
CSL4	YNL232W	GSF2	Q04697	403 aa	Known RBP	6.23	□□□□□ -1.41
CSL4	YNL232W	EIS1	Q05050	843 aa	Known RBP	6.23	□□□□□ -1.41
CSL4	YNL232W	YCG1	Q06680	1035 aa		6.23	□□□□□ -1.41
CSL4	YNL232W	DCS2	Q12123	353 aa		6.23	□□□□□ -1.41
CSL4	YNL232W	MSF1	P08425	469 aa		6.22	□□□□□ -1.41
CSL4	YNL232W	ISY1	P21374	235 aa	Predicted RBP	6.22	□□□□□ -1.41
CSL4	YNL232W	YBR225W	P38321	900 aa		6.22	□□□□□ -1.41
CSL4	YNL232W	BAT1	P38891	393 aa	Known RBP	6.22	□□□□□ -1.41
CSL4	YNL232W	TAT2	P38967	592 aa		6.22	□□□□□ -1.41
CSL4	YNL232W	TDA7	P53882	636 aa	Predicted RBP	6.22	□□□□□ -1.41
CSL4	YNL232W	TOF2	Q02208	771 aa		6.22	□□□□□ -1.41
CSL4	YNL232W	NBL1	Q3E7Y6	73 aa		6.22	□□□□□ -1.41
CSL4	YNL232W	HSP82	P02829	709 aa	Known RBP	6.21	□□□□□ -1.42
CSL4	YNL232W	CHS1	P08004	1131 aa		6.21	□□□□□ -1.42
CSL4	YNL232W	CCR4	P31384	837 aa	Known RBP	6.21	□□□□□ -1.42
CSL4	YNL232W	YEL1	P34225	687 aa		6.21	□□□□□ -1.42
CSL4	YNL232W	ATG12	P38316	186 aa		6.21	□□□□□ -1.42
CSL4	YNL232W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	6.21	□□□□□ -1.42	not detected
CSL4	YNL232W	AVT2	P39981	480 aa		6.21	□□□□□ -1.42
CSL4	YNL232W	YPS6	P40583	537 aa		6.21	□□□□□ -1.42
CSL4	YNL232W	YFL054C	P43549	646 aa		6.21	□□□□□ -1.42
CSL4	YNL232W	DUG1	P43616	481 aa	Known RBP	6.21	□□□□□ -1.42
CSL4	YNL232W	NPA3	P47122	385 aa		6.21	□□□□□ -1.42
CSL4	YNL232W	HNT2	P49775	206 aa		6.21	□□□□□ -1.42
CSL4	YNL232W	HSH155	P49955	971 aa	Known RBP	6.21	□□□□□ -1.42
CSL4	YNL232W	ECM22	Q05958	814 aa	Predicted RBP	6.21	□□□□□ -1.42
CSL4	YNL232W	TSR1	Q07381	788 aa	Known RBP	6.21	□□□□□ -1.42
CSL4	YNL232W	RTK1	Q12100	620 aa	Predicted RBP	6.21	□□□□□ -1.42
CSL4	YNL232W	RML2	P32611	393 aa		6.2	□□□□□ -1.42
CSL4	YNL232W	PPE1	P38796	400 aa		6.2	□□□□□ -1.42
CSL4	YNL232W	NPP2	P39997	493 aa		6.2	□□□□□ -1.42
CSL4	YNL232W	HEM14	P40012	539 aa		6.2	□□□□□ -1.42
CSL4	YNL232W	THI6	P41835	540 aa		6.2	□□□□□ -1.42
CSL4	YNL232W	DAS1	P47005	663 aa		6.2	□□□□□ -1.42
CSL4	YNL232W	UBA2	P52488	636 aa		6.2	□□□□□ -1.42
CSL4	YNL232W	YGL036W	P53185	909 aa	Predicted RBP	6.2	□□□□□ -1.42
CSL4	YNL232W	YPL014W	Q02606	381 aa		6.2	□□□□□ -1.42
CSL4	YNL232W	YOR387C	Q08910	206 aa		6.2	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms