RNA–Protein interactions for RNA: YLR351C

NIT3, Transcript of Nit protein, yeast

Gene NIT3, Length 876 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIT3	YLR351C	SEC18	P18759	758 aa	Known RBP	5	□□□□□ -1.61
NIT3	YLR351C	VPS34	P22543	875 aa		5	□□□□□ -1.61
NIT3	YLR351C	LOT5	P34234	306 aa		5	□□□□□ -1.61
NIT3	YLR351C	CCL1	P37366	393 aa		5	□□□□□ -1.61
NIT3	YLR351C	STT3	P39007	718 aa	Known RBP	5	□□□□□ -1.61
NIT3	YLR351C	QRI1	P43123	477 aa	Known RBP	5	□□□□□ -1.61
NIT3	YLR351C	POL31	P46957	487 aa		5	□□□□□ -1.61
NIT3	YLR351C	BUD17	P53727	317 aa		5	□□□□□ -1.61
NIT3	YLR351C	MOT3	P54785	490 aa	Known RBP	5	□□□□□ -1.61
NIT3	YLR351C	TRS31	Q03337	283 aa		5	□□□□□ -1.61
NIT3	YLR351C	ATG16	Q03818	150 aa		5	□□□□□ -1.61
NIT3	YLR351C	HOF1	Q05080	669 aa		5	□□□□□ -1.61
NIT3	YLR351C	ENT2	Q05785	613 aa		5	□□□□□ -1.61
NIT3	YLR351C	YDL073W	Q07454	984 aa		5	□□□□□ -1.61
NIT3	YLR351C	RPN13	O13563	156 aa		4.99	□□□□□ -1.61
NIT3	YLR351C	SIR1	P21691	654 aa		4.99	□□□□□ -1.61
NIT3	YLR351C	TDP1	P38319	544 aa		4.99	□□□□□ -1.61
NIT3	YLR351C	STB5	P38699	743 aa		4.99	□□□□□ -1.61
NIT3	YLR351C	MIT1	P40002	666 aa		4.99	□□□□□ -1.61
NIT3	YLR351C	IDS2	P46958	469 aa		4.99	□□□□□ -1.61
NIT3	YLR351C	RPS15	Q01855	142 aa	Known RBP	4.99	□□□□□ -1.61
NIT3	YLR351C	EIS1	Q05050	843 aa	Known RBP	4.99	□□□□□ -1.61
NIT3	YLR351C	PHO5	P00635	467 aa		4.98	□□□□□ -1.61
NIT3	YLR351C	MCM3	P24279	971 aa	Known RBP	4.98	□□□□□ -1.61
NIT3	YLR351C	MUP3	P38734	546 aa		4.98	□□□□□ -1.61
NIT3	YLR351C	YIL166C	P40445	542 aa		4.98	□□□□□ -1.61
NIT3	YLR351C	VPS64	Q03944	604 aa		4.98	□□□□□ -1.61
NIT3	YLR351C	IWR1	Q07532	353 aa	Predicted RBP	4.98	□□□□□ -1.61
NIT3	YLR351C	PEP1	P32319	1579 aa		4.97	□□□□□ -1.61
NIT3	YLR351C	MIS1	P09440	975 aa	Known RBP	4.97	□□□□□ -1.61
NIT3	YLR351C	POL3	P15436	1097 aa		4.97	□□□□□ -1.61
NIT3	YLR351C	MSM1	P22438	575 aa		4.97	□□□□□ -1.61
NIT3	YLR351C	EMP70	P32802	667 aa		4.97	□□□□□ -1.61
NIT3	YLR351C	SDH8	P38345	138 aa		4.97	□□□□□ -1.61
NIT3	YLR351C	SPC72	P39723	622 aa		4.97	□□□□□ -1.61
NIT3	YLR351C	IES5	P40060	125 aa		4.97	□□□□□ -1.61
NIT3	YLR351C	CPR6	P53691	371 aa	Known RBP	4.97	□□□□□ -1.61
NIT3	YLR351C	ZPS1	Q12512	249 aa		4.97	□□□□□ -1.61
NIT3	YLR351C	TPK2	P06245	380 aa		4.96	□□□□□ -1.62
NIT3	YLR351C	APA1	P16550	321 aa	Known RBP	4.96	□□□□□ -1.62
NIT3	YLR351C	PRE2	P30656	287 aa	Known RBP	4.96	□□□□□ -1.62
NIT3	YLR351C	FRD1	P32614	470 aa	Known RBP	4.96	□□□□□ -1.62
NIT3	YLR351C	YPT10	P38146	199 aa		4.96	□□□□□ -1.62
NIT3	YLR351C	PMC1	P38929	1173 aa	Predicted RBP	4.96	□□□□□ -1.62
NIT3	YLR351C	YEL020C	P39994	560 aa		4.96	□□□□□ -1.62
NIT3	YLR351C	RPT2	P40327	437 aa	Known RBP	4.96	□□□□□ -1.62
NIT3	YLR351C	ASN1	P49089	572 aa	Known RBP	4.96	□□□□□ -1.62
NIT3	YLR351C	COQ6	P53318	479 aa		4.96	□□□□□ -1.62
NIT3	YLR351C	CPR8	P53728	308 aa		4.96	□□□□□ -1.62
NIT3	YLR351C	GFD1	Q04839	188 aa	Known RBP	4.96	□□□□□ -1.62
NIT3	YLR351C	PSR2	Q07949	397 aa		4.96	□□□□□ -1.62
NIT3	YLR351C	REV3	P14284	1504 aa		4.96	□□□□□ -1.62
NIT3	YLR351C	WHI2	P12611	486 aa		4.95	□□□□□ -1.62
NIT3	YLR351C	STE12	P13574	688 aa		4.95	□□□□□ -1.62
NIT3	YLR351C	RPS7A	P26786	190 aa	Known RBP	4.95	□□□□□ -1.62
NIT3	YLR351C	DBF20	P32328	564 aa		4.95	□□□□□ -1.62
NIT3	YLR351C	CDC5	P32562	705 aa		4.95	□□□□□ -1.62
NIT3	YLR351C	MRS6	P32864	603 aa	Known RBP	4.95	□□□□□ -1.62
NIT3	YLR351C	CAB2	P40506	365 aa		4.95	□□□□□ -1.62
NIT3	YLR351C	FAF1	P40546	346 aa	Predicted RBP	4.95	□□□□□ -1.62
NIT3	YLR351C	SAP4	P53036	818 aa		4.95	□□□□□ -1.62
NIT3	YLR351C	YGL117W	P53133	265 aa		4.95	□□□□□ -1.62
NIT3	YLR351C	YGR021W	P53212	290 aa		4.95	□□□□□ -1.62
NIT3	YLR351C	APM1	Q00776	475 aa	Predicted RBP	4.95	□□□□□ -1.62
NIT3	YLR351C	ARA2	Q04212	335 aa		4.95	□□□□□ -1.62
NIT3	YLR351C	SUT2	Q12286	268 aa		4.95	□□□□□ -1.62
NIT3	YLR351C	SIN3	P22579	1536 aa		4.94	□□□□□ -1.62
NIT3	YLR351C	CPA2	P03965	1118 aa	Known RBP	4.94	□□□□□ -1.62
NIT3	YLR351C	AAC1	P04710	309 aa		4.94	□□□□□ -1.62
NIT3	YLR351C	YPK1	P12688	680 aa	Known RBP	4.94	□□□□□ -1.62
NIT3	YLR351C	FUI1	P38196	639 aa		4.94	□□□□□ -1.62
NIT3	YLR351C	MRK1	P50873	501 aa		4.94	□□□□□ -1.62
NIT3	YLR351C	AIM6	Q07716	390 aa		4.94	□□□□□ -1.62
NIT3	YLR351C	ATG2	P53855	1592 aa		4.94	□□□□□ -1.62
NIT3	YLR351C	MDS3	P53094	1487 aa		4.94	□□□□□ -1.62
NIT3	YLR351C	RPA135	P22138	1203 aa	Known RBP	4.93	□□□□□ -1.62
NIT3	YLR351C	SPO11	P23179	398 aa		4.93	□□□□□ -1.62
NIT3	YLR351C	SAT4	P25333	603 aa	Known RBP	4.93	□□□□□ -1.62
NIT3	YLR351C	YCR061W	P25639	631 aa		4.93	□□□□□ -1.62
NIT3	YLR351C	DPB3	P27344	201 aa		4.93	□□□□□ -1.62
NIT3	YLR351C	UGP1	P32861	499 aa	Known RBP	4.93	□□□□□ -1.62
NIT3	YLR351C	ATG21	Q02887	496 aa		4.93	□□□□□ -1.62
NIT3	YLR351C	GIS1	Q03833	894 aa		4.93	□□□□□ -1.62
NIT3	YLR351C	CIA1	Q05583	330 aa		4.93	□□□□□ -1.62
NIT3	YLR351C	BLS1	Q06071	122 aa		4.93	□□□□□ -1.62
NIT3	YLR351C	CRT10	Q08226	957 aa		4.93	□□□□□ -1.62
NIT3	YLR351C	ADE3	P07245	946 aa	Known RBP	4.92	□□□□□ -1.62
NIT3	YLR351C	BIK1	P11709	440 aa		4.92	□□□□□ -1.62
NIT3	YLR351C	RNR3	P21672	869 aa	Known RBP	4.92	□□□□□ -1.62
NIT3	YLR351C	RIT1	P23796	513 aa		4.92	□□□□□ -1.62
NIT3	YLR351C	CLB4	P24871	460 aa		4.92	□□□□□ -1.62
NIT3	YLR351C	PAC2	P39937	518 aa		4.92	□□□□□ -1.62
NIT3	YLR351C	ARB1	P40024	610 aa	Known RBP	4.92	□□□□□ -1.62
NIT3	YLR351C	PUG1	P40100	303 aa		4.92	□□□□□ -1.62
NIT3	YLR351C	SAP185	P40856	1058 aa		4.92	□□□□□ -1.62
NIT3	YLR351C	IMA1	P53051	589 aa		4.92	□□□□□ -1.62
NIT3	YLR351C	YPL108W	Q02872	168 aa	Predicted RBP	4.92	□□□□□ -1.62
NIT3	YLR351C	ICL2	Q12031	575 aa		4.92	□□□□□ -1.62
NIT3	YLR351C	TRX2	P22803	104 aa	Known RBP	4.91	□□□□□ -1.62
NIT3	YLR351C	MRPL9	P31334	269 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms