RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C SKP2P42843 763 aa3.42□□□□□ -1.86
CMS1YLR003C NOP15P53927 220 aaPredicted RBP3.42□□□□□ -1.86
CMS1YLR003C YMR317WQ04893 1140 aa3.42□□□□□ -1.86
CMS1YLR003C RPS21BQ3E754 87 aaKnown RBP3.42□□□□□ -1.86
CMS1YLR003C NOP14Q99207 810 aaKnown RBP3.42□□□□□ -1.86
CMS1YLR003C CET1O13297 549 aaPredicted RBP3.41□□□□□ -1.86
CMS1YLR003C GLN4P13188 809 aaKnown RBP3.41□□□□□ -1.86
CMS1YLR003C FMP46P36141 133 aaKnown RBP3.41□□□□□ -1.86
CMS1YLR003C EHT1P38295 451 aa3.41□□□□□ -1.86
CMS1YLR003C RET2P43621 546 aa3.41□□□□□ -1.86
CMS1YLR003C YJR142WP47173 342 aa3.41□□□□□ -1.86
CMS1YLR003C HLJ1P48353 224 aa3.41□□□□□ -1.86
CMS1YLR003C CYK3Q07533 885 aa3.41□□□□□ -1.86
CMS1YLR003C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
CMS1YLR003C AAC1P04710 309 aa3.4□□□□□ -1.87
CMS1YLR003C MGS1P40151 587 aa3.4□□□□□ -1.87
CMS1YLR003C TAF4P50105 388 aa3.4□□□□□ -1.87
CMS1YLR003C SDA1P53313 767 aaKnown RBP3.4□□□□□ -1.87
CMS1YLR003C UTP14Q04500 899 aaKnown RBP3.4□□□□□ -1.87
CMS1YLR003C PNO1Q99216 274 aaKnown RBP3.4□□□□□ -1.87
CMS1YLR003C NUP145P49687 1317 aa3.4□□□□□ -1.87
CMS1YLR003C TOM71P38825 639 aaKnown RBP3.39□□□□□ -1.87
CMS1YLR003C YJR096WP47137 282 aa3.39□□□□□ -1.87
CMS1YLR003C DNM1P54861 757 aa3.39□□□□□ -1.87
CMS1YLR003C VTC3Q02725 835 aa3.39□□□□□ -1.87
CMS1YLR003C NSE5Q03718 556 aa3.39□□□□□ -1.87
CMS1YLR003C SNU56Q03782 492 aaKnown RBP3.39□□□□□ -1.87
CMS1YLR003C YMR034CQ05131 434 aaPredicted RBP3.39□□□□□ -1.87
CMS1YLR003C ARR3Q06598 404 aa3.39□□□□□ -1.87
CMS1YLR003C MLH2Q07980 695 aa3.39□□□□□ -1.87
CMS1YLR003C AIM41Q12032 185 aa3.39□□□□□ -1.87
CMS1YLR003C YMR230W-AQ3E7B5 62 aa3.39□□□□□ -1.87
CMS1YLR003C RPL8AP17076 256 aaKnown RBP3.38□□□□□ -1.87
CMS1YLR003C SCO2P38072 301 aa3.38□□□□□ -1.87
CMS1YLR003C LRO1P40345 661 aa3.38□□□□□ -1.87
CMS1YLR003C YIL169CP40442 995 aa3.38□□□□□ -1.87
CMS1YLR003C PRM2P40534 656 aa3.38□□□□□ -1.87
CMS1YLR003C IES1P43579 692 aa3.38□□□□□ -1.87
CMS1YLR003C YNL058CP53947 316 aa3.38□□□□□ -1.87
CMS1YLR003C MAK32P23060 363 aa3.37□□□□□ -1.87
CMS1YLR003C SEC65P29478 273 aa3.37□□□□□ -1.87
CMS1YLR003C MTC7P32633 139 aa3.37□□□□□ -1.87
CMS1YLR003C FTH1P38310 465 aa3.37□□□□□ -1.87
CMS1YLR003C SLX1P38324 304 aa3.37□□□□□ -1.87
CMS1YLR003C IMD2P38697 523 aaKnown RBP3.37□□□□□ -1.87
CMS1YLR003C VRG4P40107 337 aa3.37□□□□□ -1.87
CMS1YLR003C YGR153WP48238 217 aa3.37□□□□□ -1.87
CMS1YLR003C IMD3P50095 523 aaKnown RBP3.37□□□□□ -1.87
CMS1YLR003C PRP19P32523 503 aaKnown RBP3.36□□□□□ -1.87
CMS1YLR003C FAT1P38225 669 aa3.36□□□□□ -1.87
CMS1YLR003C HXT6P39003 570 aaKnown RBP3.36□□□□□ -1.87
CMS1YLR003C HXT7P39004 570 aa3.36□□□□□ -1.87
CMS1YLR003C SAD1P43589 448 aa3.36□□□□□ -1.87
CMS1YLR003C YDL183CP48569 320 aa3.36□□□□□ -1.87
CMS1YLR003C GAL4P04386 881 aa3.35□□□□□ -1.87
CMS1YLR003C ILS1P09436 1072 aaKnown RBP3.35□□□□□ -1.87
CMS1YLR003C YHR033WP38690 423 aa3.35□□□□□ -1.87
CMS1YLR003C CKB2P38930 258 aa3.35□□□□□ -1.87
CMS1YLR003C VID28P40547 921 aa3.35□□□□□ -1.87
CMS1YLR003C HOS2P53096 452 aaPredicted RBP3.35□□□□□ -1.87
CMS1YLR003C DOS2P54858 310 aa3.35□□□□□ -1.87
CMS1YLR003C ECM9Q02202 377 aa3.35□□□□□ -1.87
CMS1YLR003C YCG1Q06680 1035 aa3.35□□□□□ -1.87
CMS1YLR003C THI73Q07904 523 aa3.35□□□□□ -1.87
CMS1YLR003C RPS21AP0C0V8 87 aaKnown RBP3.34□□□□□ -1.87
CMS1YLR003C YPK1P12688 680 aaKnown RBP3.34□□□□□ -1.87
CMS1YLR003C CDC26P14724 124 aa3.34□□□□□ -1.87
CMS1YLR003C PPZ1P26570 692 aa3.34□□□□□ -1.87
CMS1YLR003C CIN1P40987 1014 aa3.34□□□□□ -1.87
CMS1YLR003C YHM2Q04013 314 aa3.34□□□□□ -1.87
CMS1YLR003C OAF3P36023 863 aa3.33□□□□□ -1.88
CMS1YLR003C YGR237CP50089 785 aa3.33□□□□□ -1.88
CMS1YLR003C RAD33Q04231 177 aa3.33□□□□□ -1.88
CMS1YLR003C SMA2Q04658 369 aa3.33□□□□□ -1.88
CMS1YLR003C CRT10Q08226 957 aa3.33□□□□□ -1.88
CMS1YLR003C FAP7Q12055 197 aaPredicted RBP3.33□□□□□ -1.88
CMS1YLR003C GET3Q12154 354 aaKnown RBP3.33□□□□□ -1.88
CMS1YLR003C HMG2P12684 1045 aa3.32□□□□□ -1.88
CMS1YLR003C TYS1P36421 394 aaKnown RBP3.32□□□□□ -1.88
CMS1YLR003C YJL193WP39542 402 aa3.32□□□□□ -1.88
CMS1YLR003C YEN1P40028 759 aa3.32□□□□□ -1.88
CMS1YLR003C PMT3P47190 753 aa3.32□□□□□ -1.88
CMS1YLR003C YNR029CP53729 429 aaKnown RBP3.32□□□□□ -1.88
CMS1YLR003C UME1Q03010 460 aa3.32□□□□□ -1.88
CMS1YLR003C MTD1Q02046 320 aaKnown RBP3.31□□□□□ -1.88
CMS1YLR003C YFL068WP0CX99 160 aa3.3□□□□□ -1.88
CMS1YLR003C YLL066W-AP0CY00 160 aa3.3□□□□□ -1.88
CMS1YLR003C YLL067W-AP0CY01 160 aa3.3□□□□□ -1.88
CMS1YLR003C PCK1P10963 549 aa3.3□□□□□ -1.88
CMS1YLR003C VPS33P20795 691 aa3.3□□□□□ -1.88
CMS1YLR003C DHH1P39517 506 aaKnown RBP3.3□□□□□ -1.88
CMS1YLR003C CIR1P42940 261 aa3.3□□□□□ -1.88
CMS1YLR003C MTQ2Q03920 221 aaPredicted RBP3.3□□□□□ -1.88
CMS1YLR003C HFI1Q12060 488 aa3.3□□□□□ -1.88
CMS1YLR003C MF(ALPHA)2P32435 120 aa3.29□□□□□ -1.88
CMS1YLR003C TUF1P02992 437 aaKnown RBP3.28□□□□□ -1.88
CMS1YLR003C HXT4P32467 576 aa3.28□□□□□ -1.88
CMS1YLR003C GDA1P32621 518 aa3.28□□□□□ -1.88
CMS1YLR003C YPT11P48559 417 aa3.28□□□□□ -1.88
CMS1YLR003C YNL092WP53934 400 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms