RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	AAD4	Q07747	329 aa		5.03	□□□□□ -1.6
EBP2	YKL172W	TAD3	Q9URQ3	322 aa		5.03	□□□□□ -1.6
EBP2	YKL172W	CPA2	P03965	1118 aa	Known RBP	5.02	□□□□□ -1.61
EBP2	YKL172W	SDH8	P38345	138 aa		5.02	□□□□□ -1.61
EBP2	YKL172W	VPS27	P40343	622 aa	Known RBP	5.02	□□□□□ -1.61
EBP2	YKL172W	YGL117W	P53133	265 aa		5.02	□□□□□ -1.61
EBP2	YKL172W	TRS31	Q03337	283 aa		5.02	□□□□□ -1.61
EBP2	YKL172W	CRT10	Q08226	957 aa		5.02	□□□□□ -1.61
EBP2	YKL172W	SLK19	Q08581	821 aa	Known RBP	5.02	□□□□□ -1.61
EBP2	YKL172W	TUB1	P09733	447 aa	Known RBP	5.01	□□□□□ -1.61
EBP2	YKL172W	PHO81	P17442	1178 aa		5.01	□□□□□ -1.61
EBP2	YKL172W	POL31	P46957	487 aa		5.01	□□□□□ -1.61
EBP2	YKL172W	SAP4	P53036	818 aa		5.01	□□□□□ -1.61
EBP2	YKL172W	COS12	P53053	380 aa		5.01	□□□□□ -1.61
EBP2	YKL172W	UBX4	P54730	416 aa		5.01	□□□□□ -1.61
EBP2	YKL172W	VPS64	Q03944	604 aa		5.01	□□□□□ -1.61
EBP2	YKL172W	BRE1	Q07457	700 aa	Known RBP	5.01	□□□□□ -1.61
EBP2	YKL172W	ULA1	Q12059	462 aa		5.01	□□□□□ -1.61
EBP2	YKL172W	YMR084W	A2P2R3	262 aa		5	□□□□□ -1.61
EBP2	YKL172W	AAC1	P04710	309 aa		5	□□□□□ -1.61
EBP2	YKL172W	ADE5,7	P07244	802 aa	Known RBP	5	□□□□□ -1.61
EBP2	YKL172W	APM3	P38153	483 aa		5	□□□□□ -1.61
EBP2	YKL172W	RAD26	P40352	1085 aa		5	□□□□□ -1.61
EBP2	YKL172W	MAD3	P47074	515 aa		5	□□□□□ -1.61
EBP2	YKL172W	GIS1	Q03833	894 aa		5	□□□□□ -1.61
EBP2	YKL172W	ARO10	Q06408	635 aa		5	□□□□□ -1.61
EBP2	YKL172W	RPL7A	P05737	244 aa	Known RBP	4.99	□□□□□ -1.61
EBP2	YKL172W	PIF1	P07271	859 aa		4.99	□□□□□ -1.61
EBP2	YKL172W	MSS18	P08593	268 aa		4.99	□□□□□ -1.61
EBP2	YKL172W	RNR3	P21672	869 aa	Known RBP	4.99	□□□□□ -1.61
EBP2	YKL172W	MSH1	P25846	959 aa		4.99	□□□□□ -1.61
EBP2	YKL172W	CDC5	P32562	705 aa		4.99	□□□□□ -1.61
EBP2	YKL172W	STB5	P38699	743 aa		4.99	□□□□□ -1.61
EBP2	YKL172W	LNP1	P38878	278 aa		4.99	□□□□□ -1.61
EBP2	YKL172W	RIX1	P38883	763 aa	Predicted RBP	4.99	□□□□□ -1.61
EBP2	YKL172W	STT3	P39007	718 aa	Known RBP	4.99	□□□□□ -1.61
EBP2	YKL172W	OPT1	P40897	799 aa		4.99	□□□□□ -1.61
EBP2	YKL172W	EIS1	Q05050	843 aa	Known RBP	4.99	□□□□□ -1.61
EBP2	YKL172W	RPL7B	Q12213	244 aa	Known RBP	4.99	□□□□□ -1.61
EBP2	YKL172W	PMA2	P19657	947 aa		4.98	□□□□□ -1.61
EBP2	YKL172W	SIR1	P21691	654 aa		4.98	□□□□□ -1.61
EBP2	YKL172W	YHL041W	P38730	149 aa		4.98	□□□□□ -1.61
EBP2	YKL172W	RTS3	P53289	263 aa		4.98	□□□□□ -1.61
EBP2	YKL172W	ARA2	Q04212	335 aa		4.98	□□□□□ -1.61
EBP2	YKL172W	ARG7	Q04728	441 aa		4.98	□□□□□ -1.61
EBP2	YKL172W	MIS1	P09440	975 aa	Known RBP	4.97	□□□□□ -1.61
EBP2	YKL172W	YPK1	P12688	680 aa	Known RBP	4.97	□□□□□ -1.61
EBP2	YKL172W	YCR061W	P25639	631 aa		4.97	□□□□□ -1.61
EBP2	YKL172W	RPS7A	P26786	190 aa	Known RBP	4.97	□□□□□ -1.61
EBP2	YKL172W	MRPL9	P31334	269 aa		4.97	□□□□□ -1.61
EBP2	YKL172W	YMC1	P32331	307 aa		4.97	□□□□□ -1.61
EBP2	YKL172W	CUE2	P36075	443 aa	Known RBP	4.97	□□□□□ -1.61
EBP2	YKL172W	YPT10	P38146	199 aa		4.97	□□□□□ -1.61
EBP2	YKL172W	LAS21	P40367	830 aa		4.97	□□□□□ -1.61
EBP2	YKL172W	FAF1	P40546	346 aa	Predicted RBP	4.97	□□□□□ -1.61
EBP2	YKL172W	ACS1	Q01574	713 aa		4.97	□□□□□ -1.61
EBP2	YKL172W	VMS1	Q04311	632 aa	Known RBP	4.97	□□□□□ -1.61
EBP2	YKL172W	IWR1	Q07532	353 aa	Predicted RBP	4.97	□□□□□ -1.61
EBP2	YKL172W	BNR1	P40450	1375 aa		4.96	□□□□□ -1.62
EBP2	YKL172W	HEM1	P09950	548 aa	Predicted RBP	4.96	□□□□□ -1.62
EBP2	YKL172W	PGI1	P12709	554 aa	Known RBP	4.96	□□□□□ -1.62
EBP2	YKL172W	PRE2	P30656	287 aa	Known RBP	4.96	□□□□□ -1.62
EBP2	YKL172W	SWC3	P31376	625 aa		4.96	□□□□□ -1.62
EBP2	YKL172W	PTH2	P34222	208 aa		4.96	□□□□□ -1.62
EBP2	YKL172W	MAM1	P40065	302 aa		4.96	□□□□□ -1.62
EBP2	YKL172W	CAB2	P40506	365 aa		4.96	□□□□□ -1.62
EBP2	YKL172W	CPR6	P53691	371 aa	Known RBP	4.96	□□□□□ -1.62
EBP2	YKL172W	FMP30	Q02883	468 aa		4.96	□□□□□ -1.62
EBP2	YKL172W	WAR1	Q03631	944 aa		4.96	□□□□□ -1.62
EBP2	YKL172W	HIM1	Q06674	414 aa		4.96	□□□□□ -1.62
EBP2	YKL172W	AIM6	Q07716	390 aa		4.96	□□□□□ -1.62
EBP2	YKL172W	NDJ1	Q12366	352 aa		4.96	□□□□□ -1.62
EBP2	YKL172W	LEU2	P04173	364 aa	Predicted RBP	4.95	□□□□□ -1.62
EBP2	YKL172W	POL3	P15436	1097 aa		4.95	□□□□□ -1.62
EBP2	YKL172W	AAD3	P25612	363 aa		4.95	□□□□□ -1.62
EBP2	YKL172W	FRD1	P32614	470 aa	Known RBP	4.95	□□□□□ -1.62
EBP2	YKL172W	ATF1	P40353	525 aa		4.95	□□□□□ -1.62
EBP2	YKL172W	YER175W-A	Q8TGU4	54 aa		4.95	□□□□□ -1.62
EBP2	YKL172W	KGD2	P19262	463 aa	Predicted RBP	4.94	□□□□□ -1.62
EBP2	YKL172W	MCM3	P24279	971 aa	Known RBP	4.94	□□□□□ -1.62
EBP2	YKL172W	RPC34	P32910	317 aa		4.94	□□□□□ -1.62
EBP2	YKL172W	ACA1	P39970	489 aa		4.94	□□□□□ -1.62
EBP2	YKL172W	IMO32	P53219	342 aa		4.94	□□□□□ -1.62
EBP2	YKL172W	MOT3	P54785	490 aa	Known RBP	4.94	□□□□□ -1.62
EBP2	YKL172W	YPL108W	Q02872	168 aa	Predicted RBP	4.94	□□□□□ -1.62
EBP2	YKL172W	ATG21	Q02887	496 aa		4.94	□□□□□ -1.62
EBP2	YKL172W	CRF1	Q04930	467 aa		4.94	□□□□□ -1.62
EBP2	YKL172W	CHO2	P05374	869 aa	Known RBP	4.93	□□□□□ -1.62
EBP2	YKL172W	PDE1	P22434	369 aa		4.93	□□□□□ -1.62
EBP2	YKL172W	APD1	P38281	316 aa		4.93	□□□□□ -1.62
EBP2	YKL172W	YFL015C	P43578	164 aa		4.93	□□□□□ -1.62
EBP2	YKL172W	IMA1	P53051	589 aa		4.93	□□□□□ -1.62
EBP2	YKL172W	COG2	P53271	262 aa		4.93	□□□□□ -1.62
EBP2	YKL172W	COQ11	Q05892	277 aa		4.93	□□□□□ -1.62
EBP2	YKL172W	AHA1	Q12449	350 aa	Known RBP	4.93	□□□□□ -1.62
EBP2	YKL172W	MSM1	P22438	575 aa		4.92	□□□□□ -1.62
EBP2	YKL172W	RIT1	P23796	513 aa		4.92	□□□□□ -1.62
EBP2	YKL172W	PWP2	P25635	923 aa	Known RBP	4.92	□□□□□ -1.62
EBP2	YKL172W	FLO10	P36170	1169 aa		4.92	□□□□□ -1.62
EBP2	YKL172W	MTG2	P38860	518 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms