RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	ENT2	Q05785	613 aa		2.75	□□□□□ -1.97
NUP82	YJL061W	AAD4	Q07747	329 aa		2.75	□□□□□ -1.97
NUP82	YJL061W	SLK19	Q08581	821 aa	Known RBP	2.75	□□□□□ -1.97
NUP82	YJL061W	TUB1	P09733	447 aa	Known RBP	2.74	□□□□□ -1.97
NUP82	YJL061W	VPS27	P40343	622 aa	Known RBP	2.74	□□□□□ -1.97
NUP82	YJL061W	TPM2	P40414	161 aa		2.74	□□□□□ -1.97
NUP82	YJL061W	QRI7	P43122	407 aa		2.74	□□□□□ -1.97
NUP82	YJL061W	TRS31	Q03337	283 aa		2.74	□□□□□ -1.97
NUP82	YJL061W	ADE5,7	P07244	802 aa	Known RBP	2.74	□□□□□ -1.97
NUP82	YJL061W	SDH8	P38345	138 aa		2.74	□□□□□ -1.97
NUP82	YJL061W	STB5	P38699	743 aa		2.74	□□□□□ -1.97
NUP82	YJL061W	MAD3	P47074	515 aa		2.74	□□□□□ -1.97
NUP82	YJL061W	SAP4	P53036	818 aa		2.74	□□□□□ -1.97
NUP82	YJL061W	COS12	P53053	380 aa		2.74	□□□□□ -1.97
NUP82	YJL061W	GIS1	Q03833	894 aa		2.74	□□□□□ -1.97
NUP82	YJL061W	VPS64	Q03944	604 aa		2.74	□□□□□ -1.97
NUP82	YJL061W	ARO10	Q06408	635 aa		2.74	□□□□□ -1.97
NUP82	YJL061W	CRT10	Q08226	957 aa		2.74	□□□□□ -1.97
NUP82	YJL061W	ULA1	Q12059	462 aa		2.74	□□□□□ -1.97
NUP82	YJL061W	AAC1	P04710	309 aa		2.73	□□□□□ -1.97
NUP82	YJL061W	PHO81	P17442	1178 aa		2.73	□□□□□ -1.97
NUP82	YJL061W	MSH1	P25846	959 aa		2.73	□□□□□ -1.97
NUP82	YJL061W	RIX1	P38883	763 aa	Predicted RBP	2.73	□□□□□ -1.97
NUP82	YJL061W	POL31	P46957	487 aa		2.73	□□□□□ -1.97
NUP82	YJL061W	ACS1	Q01574	713 aa		2.73	□□□□□ -1.97
NUP82	YJL061W	BRE1	Q07457	700 aa	Known RBP	2.73	□□□□□ -1.97
NUP82	YJL061W	YMR084W	A2P2R3	262 aa		2.72	□□□□□ -1.97
NUP82	YJL061W	RPL7A	P05737	244 aa	Known RBP	2.72	□□□□□ -1.97
NUP82	YJL061W	PIF1	P07271	859 aa		2.72	□□□□□ -1.97
NUP82	YJL061W	MSS18	P08593	268 aa		2.72	□□□□□ -1.97
NUP82	YJL061W	RNR3	P21672	869 aa	Known RBP	2.72	□□□□□ -1.97
NUP82	YJL061W	CDC5	P32562	705 aa		2.72	□□□□□ -1.97
NUP82	YJL061W	APM3	P38153	483 aa		2.72	□□□□□ -1.97
NUP82	YJL061W	LNP1	P38878	278 aa		2.72	□□□□□ -1.97
NUP82	YJL061W	OPT1	P40897	799 aa		2.72	□□□□□ -1.97
NUP82	YJL061W	UBX4	P54730	416 aa		2.72	□□□□□ -1.97
NUP82	YJL061W	ARG7	Q04728	441 aa		2.72	□□□□□ -1.97
NUP82	YJL061W	RPL7B	Q12213	244 aa	Known RBP	2.72	□□□□□ -1.97
NUP82	YJL061W	BNR1	P40450	1375 aa		2.72	□□□□□ -1.97
NUP82	YJL061W	YPK1	P12688	680 aa	Known RBP	2.72	□□□□□ -1.97
NUP82	YJL061W	PMA2	P19657	947 aa		2.72	□□□□□ -1.97
NUP82	YJL061W	SIR1	P21691	654 aa		2.72	□□□□□ -1.97
NUP82	YJL061W	RPS7A	P26786	190 aa	Known RBP	2.72	□□□□□ -1.97
NUP82	YJL061W	MRPL9	P31334	269 aa		2.72	□□□□□ -1.97
NUP82	YJL061W	YMC1	P32331	307 aa		2.72	□□□□□ -1.97
NUP82	YJL061W	YPT10	P38146	199 aa		2.72	□□□□□ -1.97
NUP82	YJL061W	YHL041W	P38730	149 aa		2.72	□□□□□ -1.97
NUP82	YJL061W	STT3	P39007	718 aa	Known RBP	2.72	□□□□□ -1.97
NUP82	YJL061W	RTS3	P53289	263 aa		2.72	□□□□□ -1.97
NUP82	YJL061W	FMP30	Q02883	468 aa		2.72	□□□□□ -1.97
NUP82	YJL061W	HIM1	Q06674	414 aa		2.72	□□□□□ -1.97
NUP82	YJL061W	HEM1	P09950	548 aa	Predicted RBP	2.71	□□□□□ -1.98
NUP82	YJL061W	AAD3	P25612	363 aa		2.71	□□□□□ -1.98
NUP82	YJL061W	YCR061W	P25639	631 aa		2.71	□□□□□ -1.98
NUP82	YJL061W	CUE2	P36075	443 aa	Known RBP	2.71	□□□□□ -1.98
NUP82	YJL061W	WAR1	Q03631	944 aa		2.71	□□□□□ -1.98
NUP82	YJL061W	ARA2	Q04212	335 aa		2.71	□□□□□ -1.98
NUP82	YJL061W	MIS1	P09440	975 aa	Known RBP	2.71	□□□□□ -1.98
NUP82	YJL061W	PGI1	P12709	554 aa	Known RBP	2.71	□□□□□ -1.98
NUP82	YJL061W	POL3	P15436	1097 aa		2.71	□□□□□ -1.98
NUP82	YJL061W	PRE2	P30656	287 aa	Known RBP	2.71	□□□□□ -1.98
NUP82	YJL061W	MAM1	P40065	302 aa		2.71	□□□□□ -1.98
NUP82	YJL061W	RAD26	P40352	1085 aa		2.71	□□□□□ -1.98
NUP82	YJL061W	ATF1	P40353	525 aa		2.71	□□□□□ -1.98
NUP82	YJL061W	LAS21	P40367	830 aa		2.71	□□□□□ -1.98
NUP82	YJL061W	CAB2	P40506	365 aa		2.71	□□□□□ -1.98
NUP82	YJL061W	FAF1	P40546	346 aa	Predicted RBP	2.71	□□□□□ -1.98
NUP82	YJL061W	VMS1	Q04311	632 aa	Known RBP	2.71	□□□□□ -1.98
NUP82	YJL061W	EIS1	Q05050	843 aa	Known RBP	2.71	□□□□□ -1.98
NUP82	YJL061W	IWR1	Q07532	353 aa	Predicted RBP	2.71	□□□□□ -1.98
NUP82	YJL061W	LEU2	P04173	364 aa	Predicted RBP	2.7	□□□□□ -1.98
NUP82	YJL061W	MCM3	P24279	971 aa	Known RBP	2.7	□□□□□ -1.98
NUP82	YJL061W	SWC3	P31376	625 aa		2.7	□□□□□ -1.98
NUP82	YJL061W	FRD1	P32614	470 aa	Known RBP	2.7	□□□□□ -1.98
NUP82	YJL061W	RPC34	P32910	317 aa		2.7	□□□□□ -1.98
NUP82	YJL061W	YFL015C	P43578	164 aa		2.7	□□□□□ -1.98
NUP82	YJL061W	IMO32	P53219	342 aa		2.7	□□□□□ -1.98
NUP82	YJL061W	CPR6	P53691	371 aa	Known RBP	2.7	□□□□□ -1.98
NUP82	YJL061W	MOT3	P54785	490 aa	Known RBP	2.7	□□□□□ -1.98
NUP82	YJL061W	CRF1	Q04930	467 aa		2.7	□□□□□ -1.98
NUP82	YJL061W	AIM6	Q07716	390 aa		2.7	□□□□□ -1.98
NUP82	YJL061W	NDJ1	Q12366	352 aa		2.7	□□□□□ -1.98
NUP82	YJL061W	YER175W-A	Q8TGU4	54 aa		2.7	□□□□□ -1.98
NUP82	YJL061W	SEC18	P18759	758 aa	Known RBP	2.69	□□□□□ -1.98
NUP82	YJL061W	PTH2	P34222	208 aa		2.69	□□□□□ -1.98
NUP82	YJL061W	FLO10	P36170	1169 aa		2.69	□□□□□ -1.98
NUP82	YJL061W	ACA1	P39970	489 aa		2.69	□□□□□ -1.98
NUP82	YJL061W	COG2	P53271	262 aa		2.69	□□□□□ -1.98
NUP82	YJL061W	ESF2	P53743	316 aa	Known RBP	2.69	□□□□□ -1.98
NUP82	YJL061W	YPL108W	Q02872	168 aa	Predicted RBP	2.69	□□□□□ -1.98
NUP82	YJL061W	ATG21	Q02887	496 aa		2.69	□□□□□ -1.98
NUP82	YJL061W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
NUP82	YJL061W	AHA1	Q12449	350 aa	Known RBP	2.69	□□□□□ -1.98
NUP82	YJL061W	HOM2	P13663	365 aa	Known RBP	2.69	□□□□□ -1.98
NUP82	YJL061W	RIT1	P23796	513 aa		2.69	□□□□□ -1.98
NUP82	YJL061W	PEX2	P32800	271 aa		2.69	□□□□□ -1.98
NUP82	YJL061W	MTG2	P38860	518 aa		2.69	□□□□□ -1.98
NUP82	YJL061W	SPC72	P39723	622 aa		2.69	□□□□□ -1.98
NUP82	YJL061W	ARB1	P40024	610 aa	Known RBP	2.69	□□□□□ -1.98
NUP82	YJL061W	YJL043W	P47053	257 aa		2.69	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms