RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W GFA1P14742 717 aaKnown RBP3.84□□□□□ -1.79
SEC4YFL005W POL3P15436 1097 aa3.84□□□□□ -1.79
SEC4YFL005W MDM10P18409 493 aa3.84□□□□□ -1.79
SEC4YFL005W CDC43P18898 376 aa3.84□□□□□ -1.79
SEC4YFL005W VPS34P22543 875 aa3.84□□□□□ -1.79
SEC4YFL005W YJL206CP39529 758 aa3.84□□□□□ -1.79
SEC4YFL005W SAP185P40856 1058 aa3.84□□□□□ -1.79
SEC4YFL005W POL31P46957 487 aa3.84□□□□□ -1.79
SEC4YFL005W COS12P53053 380 aa3.84□□□□□ -1.79
SEC4YFL005W IMO32P53219 342 aa3.84□□□□□ -1.79
SEC4YFL005W SPC98P53540 846 aa3.84□□□□□ -1.79
SEC4YFL005W MFM1Q02783 413 aa3.84□□□□□ -1.79
SEC4YFL005W NGL2Q03264 515 aaKnown RBP3.84□□□□□ -1.79
SEC4YFL005W TRS31Q03337 283 aa3.84□□□□□ -1.79
SEC4YFL005W CIA1Q05583 330 aa3.84□□□□□ -1.79
SEC4YFL005W YPL216WQ08964 1102 aa3.84□□□□□ -1.79
SEC4YFL005W SUT2Q12286 268 aa3.84□□□□□ -1.79
SEC4YFL005W CTT1P06115 562 aa3.83□□□□□ -1.8
SEC4YFL005W TUB1P09733 447 aaKnown RBP3.83□□□□□ -1.8
SEC4YFL005W STE4P18851 423 aa3.83□□□□□ -1.8
SEC4YFL005W BET2P20133 325 aa3.83□□□□□ -1.8
SEC4YFL005W KIN3P22209 435 aa3.83□□□□□ -1.8
SEC4YFL005W DMC1P25453 334 aa3.83□□□□□ -1.8
SEC4YFL005W ILV6P25605 309 aaKnown RBP3.83□□□□□ -1.8
SEC4YFL005W CNE1P27825 502 aa3.83□□□□□ -1.8
SEC4YFL005W FRD1P32614 470 aaKnown RBP3.83□□□□□ -1.8
SEC4YFL005W PPZ2P33329 710 aa3.83□□□□□ -1.8
SEC4YFL005W CCL1P37366 393 aa3.83□□□□□ -1.8
SEC4YFL005W STB5P38699 743 aa3.83□□□□□ -1.8
SEC4YFL005W FAF1P40546 346 aaPredicted RBP3.83□□□□□ -1.8
SEC4YFL005W PMT6P42934 759 aa3.83□□□□□ -1.8
SEC4YFL005W IDS2P46958 469 aa3.83□□□□□ -1.8
SEC4YFL005W YIP4P53093 235 aa3.83□□□□□ -1.8
SEC4YFL005W USA1Q03714 838 aa3.83□□□□□ -1.8
SEC4YFL005W VPS64Q03944 604 aa3.83□□□□□ -1.8
SEC4YFL005W BLS1Q06071 122 aa3.83□□□□□ -1.8
SEC4YFL005W YAP7Q08182 245 aa3.83□□□□□ -1.8
SEC4YFL005W YNL162W-AQ3E7A8 72 aa3.83□□□□□ -1.8
SEC4YFL005W BNR1P40450 1375 aa3.82□□□□□ -1.8
SEC4YFL005W PIH1P38768 344 aa3.82□□□□□ -1.8
SEC4YFL005W CAB2P40506 365 aa3.82□□□□□ -1.8
SEC4YFL005W BUD17P53727 317 aa3.82□□□□□ -1.8
SEC4YFL005W RPS15Q01855 142 aaKnown RBP3.82□□□□□ -1.8
SEC4YFL005W YDR179W-AQ03983 463 aa3.82□□□□□ -1.8
SEC4YFL005W ARA2Q04212 335 aa3.82□□□□□ -1.8
SEC4YFL005W TGS1Q12052 315 aa3.82□□□□□ -1.8
SEC4YFL005W BIK1P11709 440 aa3.81□□□□□ -1.8
SEC4YFL005W CLB4P24871 460 aa3.81□□□□□ -1.8
SEC4YFL005W LOT5P34234 306 aa3.81□□□□□ -1.8
SEC4YFL005W YMC2P38087 329 aa3.81□□□□□ -1.8
SEC4YFL005W TDP1P38319 544 aa3.81□□□□□ -1.8
SEC4YFL005W RIX1P38883 763 aaPredicted RBP3.81□□□□□ -1.8
SEC4YFL005W PUG1P40100 303 aa3.81□□□□□ -1.8
SEC4YFL005W ERR3P42222 437 aa3.81□□□□□ -1.8
SEC4YFL005W IMA1P53051 589 aa3.81□□□□□ -1.8
SEC4YFL005W TRS23Q03784 219 aa3.81□□□□□ -1.8
SEC4YFL005W ECM16Q04217 1267 aaKnown RBP3.81□□□□□ -1.8
SEC4YFL005W YDL073WQ07454 984 aa3.81□□□□□ -1.8
SEC4YFL005W AIM6Q07716 390 aa3.81□□□□□ -1.8
SEC4YFL005W ADE3P07245 946 aaKnown RBP3.8□□□□□ -1.8
SEC4YFL005W RIT1P23796 513 aa3.8□□□□□ -1.8
SEC4YFL005W YCL049CP25577 312 aa3.8□□□□□ -1.8
SEC4YFL005W RPS7AP26786 190 aaKnown RBP3.8□□□□□ -1.8
SEC4YFL005W PRE2P30656 287 aaKnown RBP3.8□□□□□ -1.8
SEC4YFL005W XRS2P33301 854 aa3.8□□□□□ -1.8
SEC4YFL005W SDH8P38345 138 aa3.8□□□□□ -1.8
SEC4YFL005W MIT1P40002 666 aa3.8□□□□□ -1.8
SEC4YFL005W MRPL13Q02204 264 aa3.8□□□□□ -1.8
SEC4YFL005W ATG21Q02887 496 aa3.8□□□□□ -1.8
SEC4YFL005W MDM20Q12387 796 aaKnown RBP3.8□□□□□ -1.8
SEC4YFL005W NUC1P08466 329 aa3.79□□□□□ -1.8
SEC4YFL005W NCP1P16603 691 aaKnown RBP3.79□□□□□ -1.8
SEC4YFL005W SWI4P25302 1093 aaKnown RBP3.79□□□□□ -1.8
SEC4YFL005W YCR061WP25639 631 aa3.79□□□□□ -1.8
SEC4YFL005W CDC5P32562 705 aa3.79□□□□□ -1.8
SEC4YFL005W TMT1P32643 299 aa3.79□□□□□ -1.8
SEC4YFL005W EMP70P32802 667 aa3.79□□□□□ -1.8
SEC4YFL005W YPT10P38146 199 aa3.79□□□□□ -1.8
SEC4YFL005W EXO84P38261 753 aa3.79□□□□□ -1.8
SEC4YFL005W NPR3P38742 1146 aa3.79□□□□□ -1.8
SEC4YFL005W FSH1P38777 243 aaKnown RBP3.79□□□□□ -1.8
SEC4YFL005W VPS73P53142 486 aaKnown RBP3.79□□□□□ -1.8
SEC4YFL005W ARC35P53731 342 aaKnown RBP3.79□□□□□ -1.8
SEC4YFL005W YPL108WQ02872 168 aaPredicted RBP3.79□□□□□ -1.8
SEC4YFL005W TRS130Q03660 1102 aa3.79□□□□□ -1.8
SEC4YFL005W ICL2Q12031 575 aa3.79□□□□□ -1.8
SEC4YFL005W ZPS1Q12512 249 aa3.79□□□□□ -1.8
SEC4YFL005W SSM4P40318 1319 aa3.78□□□□□ -1.8
SEC4YFL005W AAC1P04710 309 aa3.78□□□□□ -1.8
SEC4YFL005W MTF2P10849 440 aa3.78□□□□□ -1.8
SEC4YFL005W WHI2P12611 486 aa3.78□□□□□ -1.8
SEC4YFL005W ARP2P32381 391 aaKnown RBP3.78□□□□□ -1.8
SEC4YFL005W MRPL36P36531 177 aa3.78□□□□□ -1.8
SEC4YFL005W PSY4P38193 441 aa3.78□□□□□ -1.8
SEC4YFL005W YBR138CP38277 524 aa3.78□□□□□ -1.8
SEC4YFL005W MUP3P38734 546 aa3.78□□□□□ -1.8
SEC4YFL005W ARB1P40024 610 aaKnown RBP3.78□□□□□ -1.8
SEC4YFL005W PSF2P40359 213 aa3.78□□□□□ -1.8
SEC4YFL005W SMK1P41808 388 aa3.78□□□□□ -1.8
SEC4YFL005W BST1P43571 1029 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms