RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W RAD51P25454 400 aa8.05□□□□□ -1.12
NDE2YDL085W YCR015CP25616 317 aa8.05□□□□□ -1.12
NDE2YDL085W MCM5P29496 775 aaKnown RBP8.05□□□□□ -1.12
NDE2YDL085W ABZ1P37254 787 aaPredicted RBP8.05□□□□□ -1.12
NDE2YDL085W YHL008CP38750 627 aa8.05□□□□□ -1.12
NDE2YDL085W STN1P38960 494 aa8.05□□□□□ -1.12
NDE2YDL085W ALD5P40047 520 aaKnown RBP8.05□□□□□ -1.12
NDE2YDL085W SUM1P46676 1062 aa8.05□□□□□ -1.12
NDE2YDL085W TAF1P46677 1066 aa8.05□□□□□ -1.12
NDE2YDL085W NOP15P53927 220 aaPredicted RBP8.05□□□□□ -1.12
NDE2YDL085W ELP3Q02908 557 aaKnown RBP8.05□□□□□ -1.12
NDE2YDL085W MUB1Q03162 620 aa8.05□□□□□ -1.12
NDE2YDL085W SPE3Q12074 293 aaKnown RBP8.05□□□□□ -1.12
NDE2YDL085W RIF1P29539 1916 aa8.05□□□□□ -1.12
NDE2YDL085W GAC1P28006 793 aa8.04□□□□□ -1.12
NDE2YDL085W URA10P30402 227 aa8.04□□□□□ -1.12
NDE2YDL085W RRP14P36080 434 aaKnown RBP8.04□□□□□ -1.12
NDE2YDL085W APN2P38207 520 aa8.04□□□□□ -1.12
NDE2YDL085W TDA11P38854 504 aa8.04□□□□□ -1.12
NDE2YDL085W AIM18P38884 321 aa8.04□□□□□ -1.12
NDE2YDL085W FRT2P39734 528 aa8.04□□□□□ -1.12
NDE2YDL085W YJL107CP42947 387 aa8.04□□□□□ -1.12
NDE2YDL085W ARC1P46672 376 aaKnown RBP8.04□□□□□ -1.12
NDE2YDL085W FMP33P46998 180 aa8.04□□□□□ -1.12
NDE2YDL085W ALY2P47029 1046 aa8.04□□□□□ -1.12
NDE2YDL085W VPS9P54787 451 aa8.04□□□□□ -1.12
NDE2YDL085W OSH6Q02201 448 aa8.04□□□□□ -1.12
NDE2YDL085W ACL4Q03771 387 aa8.04□□□□□ -1.12
NDE2YDL085W RRP15Q06511 250 aaPredicted RBP8.04□□□□□ -1.12
NDE2YDL085W MEU1Q07938 337 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
NDE2YDL085W TAF3Q12297 353 aa8.04□□□□□ -1.12
NDE2YDL085W AMS1P22855 1083 aa8.03□□□□□ -1.12
NDE2YDL085W SNT1P25357 1226 aa8.03□□□□□ -1.12
NDE2YDL085W MOT2P34909 587 aaKnown RBP8.03□□□□□ -1.12
NDE2YDL085W NUP120P35729 1037 aa8.03□□□□□ -1.12
NDE2YDL085W CUE2P36075 443 aaKnown RBP8.03□□□□□ -1.12
NDE2YDL085W HSL7P38274 827 aa8.03□□□□□ -1.12
NDE2YDL085W SKP2P42843 763 aa8.03□□□□□ -1.12
NDE2YDL085W TAH11P47112 604 aa8.03□□□□□ -1.12
NDE2YDL085W SNU56Q03782 492 aaKnown RBP8.03□□□□□ -1.12
NDE2YDL085W RSA3Q05942 220 aaKnown RBP8.03□□□□□ -1.12
NDE2YDL085W AAD15Q08361 143 aa8.03□□□□□ -1.12
NDE2YDL085W RRP36Q12481 300 aaPredicted RBP8.03□□□□□ -1.12
NDE2YDL085W TEF1P02994 458 aaKnown RBP8.03□□□□□ -1.12
NDE2YDL085W CDC20P26309 610 aa8.03□□□□□ -1.12
NDE2YDL085W RIM1P32445 135 aaKnown RBP8.03□□□□□ -1.12
NDE2YDL085W HES1P35843 434 aa8.03□□□□□ -1.12
NDE2YDL085W AGP2P38090 596 aa8.03□□□□□ -1.12
NDE2YDL085W BEM4P39011 633 aa8.03□□□□□ -1.12
NDE2YDL085W AVT2P39981 480 aa8.03□□□□□ -1.12
NDE2YDL085W DPH1P40487 425 aaKnown RBP8.03□□□□□ -1.12
NDE2YDL085W DIM1P41819 318 aaKnown RBP8.03□□□□□ -1.12
NDE2YDL085W FAR3P46671 204 aa8.03□□□□□ -1.12
NDE2YDL085W NUT1P53114 1132 aa8.03□□□□□ -1.12
NDE2YDL085W MRM2P53123 320 aa8.03□□□□□ -1.12
NDE2YDL085W PXR1P53335 271 aaPredicted RBP8.03□□□□□ -1.12
NDE2YDL085W RPM2Q02773 1202 aa8.03□□□□□ -1.12
NDE2YDL085W MUK1Q02866 612 aa8.03□□□□□ -1.12
NDE2YDL085W SKY1Q03656 742 aa8.03□□□□□ -1.12
NDE2YDL085W TAF11Q04226 346 aa8.03□□□□□ -1.12
NDE2YDL085W BUD22Q04347 519 aaKnown RBP8.03□□□□□ -1.12
NDE2YDL085W NRT1Q08485 598 aa8.03□□□□□ -1.12
NDE2YDL085W KCS1Q12494 1050 aa8.03□□□□□ -1.12
NDE2YDL085W AI5_ALPHAQ9ZZX1 630 aa8.03□□□□□ -1.12
NDE2YDL085W ADE4P04046 510 aaKnown RBP8.02□□□□□ -1.13
NDE2YDL085W DBP1P24784 617 aaKnown RBP8.02□□□□□ -1.13
NDE2YDL085W TSR4P25040 408 aa8.02□□□□□ -1.13
NDE2YDL085W DUR3P33413 735 aa8.02□□□□□ -1.13
NDE2YDL085W TGL4P36165 910 aa8.02□□□□□ -1.13
NDE2YDL085W TSC10P38342 320 aa8.02□□□□□ -1.13
NDE2YDL085W TRM5P38793 499 aa8.02□□□□□ -1.13
NDE2YDL085W CRP1P38845 465 aaKnown RBP8.02□□□□□ -1.13
NDE2YDL085W YJL206CP39529 758 aa8.02□□□□□ -1.13
NDE2YDL085W PRM9P39551 298 aa8.02□□□□□ -1.13
NDE2YDL085W ASG7P46993 209 aa8.02□□□□□ -1.13
NDE2YDL085W BCP1Q06338 283 aa8.02□□□□□ -1.13
NDE2YDL085W AAD4Q07747 329 aa8.02□□□□□ -1.13
NDE2YDL085W PEX15Q08215 383 aa8.02□□□□□ -1.13
NDE2YDL085W SLP1Q12232 587 aa8.02□□□□□ -1.13
NDE2YDL085W EFG1Q3E705 233 aaKnown RBP8.02□□□□□ -1.13
NDE2YDL085W NHA1Q99271 985 aa8.02□□□□□ -1.13
NDE2YDL085W ENO2P00925 437 aaKnown RBP8.01□□□□□ -1.13
NDE2YDL085W ERR1P0CX10 437 aa8.01□□□□□ -1.13
NDE2YDL085W ERR2P0CX11 437 aa8.01□□□□□ -1.13
NDE2YDL085W URA4P20051 364 aa8.01□□□□□ -1.13
NDE2YDL085W SSA4P22202 642 aaKnown RBP8.01□□□□□ -1.13
NDE2YDL085W RSA4P25382 515 aaKnown RBP8.01□□□□□ -1.13
NDE2YDL085W HRR25P29295 494 aaKnown RBP8.01□□□□□ -1.13
NDE2YDL085W HEM12P32347 362 aaPredicted RBP8.01□□□□□ -1.13
NDE2YDL085W AST1P35183 429 aa8.01□□□□□ -1.13
NDE2YDL085W CDC27P38042 758 aa8.01□□□□□ -1.13
NDE2YDL085W OTU2P38747 307 aaKnown RBP8.01□□□□□ -1.13
NDE2YDL085W RAD55P38953 406 aa8.01□□□□□ -1.13
NDE2YDL085W SCS2P40075 244 aaKnown RBP8.01□□□□□ -1.13
NDE2YDL085W ERR3P42222 437 aa8.01□□□□□ -1.13
NDE2YDL085W SAD1P43589 448 aa8.01□□□□□ -1.13
NDE2YDL085W POL31P46957 487 aa8.01□□□□□ -1.13
NDE2YDL085W YJL132WP47014 750 aa8.01□□□□□ -1.13
NDE2YDL085W YJR107WP47145 328 aa8.01□□□□□ -1.13
NDE2YDL085W YDR476CQ03362 224 aa8.01□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms