RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUP1	YCR084C	MDL1	P33310	695 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	YPT52	P36018	234 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	SDS22	P36047	338 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	SRL3	P36167	246 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	TYS1	P36421	394 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	RFT1	P38206	574 aa	Predicted RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	RPS26A	P39938	119 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	RPS26B	P39939	119 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	MNN11	P46985	422 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	HLJ1	P48353	224 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	TAF4	P50105	388 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	MRPS35	P53292	345 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	SNP1	Q00916	300 aa	Predicted RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	FMP30	Q02883	468 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	PEX25	Q02969	394 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	HMO1	Q03973	246 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	PSY3	Q12318	242 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	GYP5	Q12344	894 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	IES3	Q12345	250 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	FRE6	Q12473	712 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	SKS1	Q12505	502 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	PAR32	Q12515	295 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	RMP1	Q12530	201 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	NCB2	Q92317	146 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	URB1	P34241	1764 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	FUR4	P05316	633 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	LPD1	P09624	499 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	DAL81	P21657	970 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	CMK1	P27466	446 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	URA7	P28274	579 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	MCM4	P30665	933 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	GYP6	P32806	458 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	SPC29	P33419	253 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	NUP133	P36161	1157 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	YBR138C	P38277	524 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	FZO1	P38297	855 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	KSP1	P38691	1029 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	DSS1	P39112	969 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	FLC2	P39719	783 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	FET5	P43561	622 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	ALB1	P47019	175 aa	Predicted RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	YKE2	P52553	114 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	ARI1	P53111	347 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	NUT1	P53114	1132 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	ORM1	P53224	222 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	YGR054W	P53235	642 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	SNF12	P53628	566 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	IRC4	Q03036	179 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	URC2	Q04411	772 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	GFD1	Q04839	188 aa	Known RBP	5.2	□□□□□ -1.58
TUP1	YCR084C	SPC2	Q04969	178 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	TOS4	Q06266	489 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	OCA6	Q12454	224 aa		5.2	□□□□□ -1.58
TUP1	YCR084C	SSC1	P0CS90	654 aa	Known RBP	5.19	□□□□□ -1.58
TUP1	YCR084C	MTF2	P10849	440 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	MNE1	P24720	663 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	COQ8	P27697	501 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	SFP1	P32432	683 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	LAS1	P36146	502 aa	Predicted RBP	5.19	□□□□□ -1.58
TUP1	YCR084C	ADE17	P38009	592 aa	Known RBP	5.19	□□□□□ -1.58
TUP1	YCR084C	CDC27	P38042	758 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	REV7	P38927	245 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	OAF1	P39720	1047 aa	Predicted RBP	5.19	□□□□□ -1.58
TUP1	YCR084C	KHA1	P40309	873 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	HIS6	P40545	261 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	JJJ2	P46997	583 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	TEL2	P53038	688 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	YGL117W	P53133	265 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	YGR053C	P53234	283 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	VPS9	P54787	451 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	REG1	Q00816	1014 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	DCS1	Q06151	350 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	GUP2	Q08929	609 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	TAH18	Q12181	623 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	MDY2	Q12285	212 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	YRF1-1	P0CX20	1796 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	YRF1-5	P0CX21	1796 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	YRF1-8	P0CX22	1796 aa		5.19	□□□□□ -1.58
TUP1	YCR084C	ARG4	P04076	463 aa	Predicted RBP	5.18	□□□□□ -1.58
TUP1	YCR084C	GAL2	P13181	574 aa		5.18	□□□□□ -1.58
TUP1	YCR084C	FUN30	P31380	1131 aa		5.18	□□□□□ -1.58
TUP1	YCR084C	MEI5	P32489	222 aa		5.18	□□□□□ -1.58
TUP1	YCR084C	SAC6	P32599	642 aa	Known RBP	5.18	□□□□□ -1.58
TUP1	YCR084C	SLX5	P32828	619 aa	Known RBP	5.18	□□□□□ -1.58
TUP1	YCR084C	LOT5	P34234	306 aa		5.18	□□□□□ -1.58
TUP1	YCR084C	NTH2	P35172	780 aa		5.18	□□□□□ -1.58
TUP1	YCR084C	SWC5	P38326	303 aa		5.18	□□□□□ -1.58
TUP1	YCR084C	YMR262W	P38430	313 aa		5.18	□□□□□ -1.58
TUP1	YCR084C	PIC2	P40035	300 aa		5.18	□□□□□ -1.58
TUP1	YCR084C	EFM4	P40516	257 aa		5.18	□□□□□ -1.58
TUP1	YCR084C	ARF3	P40994	183 aa	RIP-Chip data	5.18	□□□□□ -1.58	not detected
TUP1	YCR084C	DLD2	P46681	530 aa	Known RBP	5.18	□□□□□ -1.58
TUP1	YCR084C	TMA22	P47089	198 aa	Predicted RBP	5.18	□□□□□ -1.58
TUP1	YCR084C	RBL2	P48606	106 aa	Known RBP	5.18	□□□□□ -1.58
TUP1	YCR084C	FMS1	P50264	508 aa		5.18	□□□□□ -1.58
TUP1	YCR084C	ARE2	P53629	642 aa	Known RBP	5.18	□□□□□ -1.58
TUP1	YCR084C	BSC5	P53755	489 aa		5.18	□□□□□ -1.58
TUP1	YCR084C	ERG5	P54781	538 aa		5.18	□□□□□ -1.58
TUP1	YCR084C	UFD2	P54860	961 aa		5.18	□□□□□ -1.58
TUP1	YCR084C	PLP1	Q04004	230 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms