RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 DDX4Q9NQI0 724 aaKnown RBP18.34■□□□□ 0.53
PHGDH-231ENST00000641939 FOCADQ5VW36 1801 aa18.34■□□□□ 0.53
PHGDH-231ENST00000641939 NPM3O75607 178 aaKnown RBP18.33■□□□□ 0.52
PHGDH-231ENST00000641939 IDH1O75874 414 aaKnown RBP18.33■□□□□ 0.52
PHGDH-231ENST00000641939 BAG3O95817 575 aa18.33■□□□□ 0.52
PHGDH-231ENST00000641939 ZSCAN29Q8IWY8 852 aaPredicted RBP18.33■□□□□ 0.52
PHGDH-231ENST00000641939 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.33■□□□□ 0.52
PHGDH-231ENST00000641939 NDUFB9Q9Y6M9 179 aa18.33■□□□□ 0.52
PHGDH-231ENST00000641939 ATRNL1Q5VV63 1379 aa18.32■□□□□ 0.52
PHGDH-231ENST00000641939 SH3BP5LQ7L8J4 393 aa18.32■□□□□ 0.52
PHGDH-231ENST00000641939 TEX11Q8IYF3 940 aa18.32■□□□□ 0.52
PHGDH-231ENST00000641939 ZKSCAN4Q969J2 545 aaPredicted RBP18.32■□□□□ 0.52
PHGDH-231ENST00000641939 ANTXR1Q9H6X2 564 aa18.32■□□□□ 0.52
PHGDH-231ENST00000641939 DCTPP1Q9H773 170 aa18.32■□□□□ 0.52
PHGDH-231ENST00000641939 AATFQ9NY61 560 aaKnown RBP eCLIP18.32■□□□□ 0.52
PHGDH-231ENST00000641939 ZNF112Q9UJU3 913 aa18.32■□□□□ 0.52
PHGDH-231ENST00000641939 SNCAIPQ9Y6H5 919 aa18.32■□□□□ 0.52
PHGDH-231ENST00000641939 DDTLA6NHG4 134 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-231ENST00000641939 PLCG2P16885 1265 aa18.31■□□□□ 0.52
PHGDH-231ENST00000641939 PPP4CP60510 307 aa18.31■□□□□ 0.52
PHGDH-231ENST00000641939 ADGRA1Q86SQ6 560 aa18.31■□□□□ 0.52
PHGDH-231ENST00000641939 ERO1BQ86YB8 467 aa18.31■□□□□ 0.52
PHGDH-231ENST00000641939 SH3RF3Q8TEJ3 882 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-231ENST00000641939 CNKSR2Q8WXI2 1034 aa18.31■□□□□ 0.52
PHGDH-231ENST00000641939 CRBNQ96SW2 442 aa18.31■□□□□ 0.52
PHGDH-231ENST00000641939 PCDHB15Q9Y5E8 787 aa18.31■□□□□ 0.52
PHGDH-231ENST00000641939 SPDYE5A6NIY4 337 aa18.3■□□□□ 0.52
PHGDH-231ENST00000641939 ALDH1A1P00352 501 aa18.3■□□□□ 0.52
PHGDH-231ENST00000641939 CYP7A1P22680 504 aa18.3■□□□□ 0.52
PHGDH-231ENST00000641939 INPP5BP32019 993 aa18.3■□□□□ 0.52
PHGDH-231ENST00000641939 MAP3K12Q12852 859 aa18.3■□□□□ 0.52
PHGDH-231ENST00000641939 TTF1Q15361 905 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-231ENST00000641939 TMED8Q6PL24 325 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-231ENST00000641939 IFNL1Q8IU54 200 aa18.3■□□□□ 0.52
PHGDH-231ENST00000641939 OTUD5Q96G74 571 aa18.3■□□□□ 0.52
PHGDH-231ENST00000641939 COL2A1P02458 1487 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-231ENST00000641939 TESPA1A2RU30 521 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-231ENST00000641939 IGF2BP3O00425 579 aaKnown RBP eCLIP18.29■□□□□ 0.52
PHGDH-231ENST00000641939 SMARCA5O60264 1052 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-231ENST00000641939 TBC1D8O95759 1140 aa18.29■□□□□ 0.52
PHGDH-231ENST00000641939 GTF2A2P52657 109 aa18.29■□□□□ 0.52
PHGDH-231ENST00000641939 MAGEB6Q8N7X4 407 aa18.29■□□□□ 0.52
PHGDH-231ENST00000641939 DNAJC2Q99543 621 aaKnown RBP18.29■□□□□ 0.52
PHGDH-231ENST00000641939 CFHR5Q9BXR6 569 aa18.29■□□□□ 0.52
PHGDH-231ENST00000641939 OSBPL5Q9H0X9 879 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-231ENST00000641939 MYH7P12883 1935 aa18.29■□□□□ 0.52
PHGDH-231ENST00000641939 MYH1P12882 1939 aa18.28■□□□□ 0.52
PHGDH-231ENST00000641939 ATP5JP18859 108 aa18.28■□□□□ 0.52
PHGDH-231ENST00000641939 MAP3K10Q02779 954 aa18.28■□□□□ 0.52
PHGDH-231ENST00000641939 PPIL2Q13356 520 aa18.28■□□□□ 0.52
PHGDH-231ENST00000641939 NOL9Q5SY16 702 aaKnown RBP18.28■□□□□ 0.52
PHGDH-231ENST00000641939 OTUD7BQ6GQQ9 843 aa18.28■□□□□ 0.52
PHGDH-231ENST00000641939 MS4A4AQ96JQ5 239 aa18.28■□□□□ 0.52
PHGDH-231ENST00000641939 DOCK1Q14185 1865 aa18.28■□□□□ 0.52
PHGDH-231ENST00000641939 PHF20L1A8MW92 1017 aa18.27■□□□□ 0.52
PHGDH-231ENST00000641939 GOLIM4O00461 696 aa18.27■□□□□ 0.52
PHGDH-231ENST00000641939 DYNLL1P63167 89 aaKnown RBP18.27■□□□□ 0.52
PHGDH-231ENST00000641939 PPATQ06203 517 aa18.27■□□□□ 0.52
PHGDH-231ENST00000641939 CERS3Q8IU89 383 aa18.27■□□□□ 0.52
PHGDH-231ENST00000641939 TGFBRAP1Q8WUH2 860 aa18.27■□□□□ 0.52
PHGDH-231ENST00000641939 SIPA1L1O43166 1804 aa18.26■□□□□ 0.51
PHGDH-231ENST00000641939 CCL15-CCL14A0A0B4J2E2 113 aa18.26■□□□□ 0.51
PHGDH-231ENST00000641939 TBC1D12O60347 775 aa18.26■□□□□ 0.51
PHGDH-231ENST00000641939 CCL15Q16663 113 aa18.26■□□□□ 0.51
PHGDH-231ENST00000641939 NOM1Q5C9Z4 860 aaKnown RBP18.26■□□□□ 0.51
PHGDH-231ENST00000641939 PTPN18Q99952 460 aa18.26■□□□□ 0.51
PHGDH-231ENST00000641939 BOLA2Q9H3K6 86 aa18.26■□□□□ 0.51
PHGDH-231ENST00000641939 PAG1Q9NWQ8 432 aa18.26■□□□□ 0.51
PHGDH-231ENST00000641939 ATAD5Q96QE3 1844 aa18.26■□□□□ 0.51
PHGDH-231ENST00000641939 FLT1P17948 1338 aa18.25■□□□□ 0.51
PHGDH-231ENST00000641939 GPR25O00155 361 aa18.25■□□□□ 0.51
PHGDH-231ENST00000641939 IRF6O14896 467 aa18.25■□□□□ 0.51
PHGDH-231ENST00000641939 SLURP2P0DP57 97 aa18.25■□□□□ 0.51
PHGDH-231ENST00000641939 SNAPC2Q13487 334 aa18.25■□□□□ 0.51
PHGDH-231ENST00000641939 SLC9C2Q5TAH2 1124 aa18.25■□□□□ 0.51
PHGDH-231ENST00000641939 MAPKAPK5Q8IW41 473 aa18.25■□□□□ 0.51
PHGDH-231ENST00000641939 MIGA1Q8NAN2 632 aa18.25■□□□□ 0.51
PHGDH-231ENST00000641939 BRI3BPQ8WY22 251 aa18.25■□□□□ 0.51
PHGDH-231ENST00000641939 HAUS7Q99871 368 aa18.25■□□□□ 0.51
PHGDH-231ENST00000641939 DHX36Q9H2U1 1008 aaKnown RBP18.25■□□□□ 0.51
PHGDH-231ENST00000641939 PHIPQ8WWQ0 1821 aa18.25■□□□□ 0.51
PHGDH-231ENST00000641939 CETPP11597 493 aa18.24■□□□□ 0.51
PHGDH-231ENST00000641939 PDE6AP16499 860 aa18.24■□□□□ 0.51
PHGDH-231ENST00000641939 SCYL3Q8IZE3 742 aa18.24■□□□□ 0.51
PHGDH-231ENST00000641939 ZNF296Q8WUU4 475 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-231ENST00000641939 EDC3Q96F86 508 aaKnown RBP18.24■□□□□ 0.51
PHGDH-231ENST00000641939 R3HDMLQ9H3Y0 253 aa18.24■□□□□ 0.51
PHGDH-231ENST00000641939 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.24■□□□□ 0.51
PHGDH-231ENST00000641939 PICK1Q9NRD5 415 aa18.24■□□□□ 0.51
PHGDH-231ENST00000641939 PTPRFP10586 1907 aa18.23■□□□□ 0.51
PHGDH-231ENST00000641939 CTNND1O60716 968 aaKnown RBP18.23■□□□□ 0.51
PHGDH-231ENST00000641939 AAMPQ13685 434 aa18.23■□□□□ 0.51
PHGDH-231ENST00000641939 ECHDC1Q9NTX5 307 aa18.23■□□□□ 0.51
PHGDH-231ENST00000641939 PI4KBQ9UBF8 816 aa18.23■□□□□ 0.51
PHGDH-231ENST00000641939 HERC5Q9UII4 1024 aaKnown RBP18.23■□□□□ 0.51
PHGDH-231ENST00000641939 FAM196BA6NMK8 535 aa18.22■□□□□ 0.51
PHGDH-231ENST00000641939 CAPN15O75808 1086 aa18.22■□□□□ 0.51
PHGDH-231ENST00000641939 CRHR2Q13324 411 aa18.22■□□□□ 0.51
PHGDH-231ENST00000641939 DGKZQ13574 1117 aa18.22■□□□□ 0.51
PHGDH-231ENST00000641939 GPATCH3Q96I76 525 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms