RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 TMEM67Q5HYA8 995 aa11.4□□□□□ -0.58
PHGDH-215ENST00000641371 STRIP1Q5VSL9 837 aa11.4□□□□□ -0.58
PHGDH-215ENST00000641371 DEFB132Q7Z7B7 95 aa11.4□□□□□ -0.58
PHGDH-215ENST00000641371 ADGRA1Q86SQ6 560 aa11.4□□□□□ -0.58
PHGDH-215ENST00000641371 KLHL34Q8N239 644 aa11.4□□□□□ -0.58
PHGDH-215ENST00000641371 ZNF384Q8TF68 577 aa11.4□□□□□ -0.58
PHGDH-215ENST00000641371 TCEANC2Q96MN5 208 aa11.4□□□□□ -0.58
PHGDH-215ENST00000641371 PSMD1Q99460 953 aa11.4□□□□□ -0.58
PHGDH-215ENST00000641371 MTFR1LQ9H019 292 aa11.4□□□□□ -0.58
PHGDH-215ENST00000641371 NBPF3Q9H094 633 aa11.4□□□□□ -0.58
PHGDH-215ENST00000641371 ZSCAN16Q9H4T2 348 aaPredicted RBP11.4□□□□□ -0.58
PHGDH-215ENST00000641371 BAZ2AQ9UIF9 1905 aaKnown RBP11.4□□□□□ -0.58
PHGDH-215ENST00000641371 FOCADQ5VW36 1801 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 MYO3BQ8WXR4 1341 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 KLF18A0A0U1RQI7 1052 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 GOLGA8BA8MQT2 603 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 MINDY4BA8MYZ0 360 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 B4E1Z4 1266 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 IFIT3O14879 490 aaKnown RBP11.39□□□□□ -0.59
PHGDH-215ENST00000641371 ZBTB43O43298 467 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 PRKAB2O43741 272 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 MBD3O95983 291 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 F13A1P00488 732 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 NCLP19338 710 aaKnown RBP11.39□□□□□ -0.59
PHGDH-215ENST00000641371 ANTXR2P58335 489 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 DYNLL1P63167 89 aaKnown RBP11.39□□□□□ -0.59
PHGDH-215ENST00000641371 GTF2IP78347 998 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 WTAPQ15007 396 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 ATL3Q6DD88 541 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 HHIPL2Q6UWX4 724 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 NECAB1Q8N987 351 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 SDR42E1Q8WUS8 393 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 C7orf43Q8WVR3 580 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 WASF1Q92558 559 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 ISY1Q9ULR0 285 aaKnown RBP11.39□□□□□ -0.59
PHGDH-215ENST00000641371 SLC12A7Q9Y666 1083 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 PSME4Q14997 1843 aa11.39□□□□□ -0.59
PHGDH-215ENST00000641371 NEDD4P46934 1319 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 USP17L12C9JPN9 530 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 USP17L21D6R901 530 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 H3BQV1 296 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 TRAK2O60296 914 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 KDM4AO75164 1064 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 METAP2P50579 478 aaKnown RBP eCLIP11.38□□□□□ -0.591e-6■■□□□ 12.1
PHGDH-215ENST00000641371 KIAA2012Q0VF49 1180 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 ST3GAL1Q11201 340 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 PPP4R3BQ5MIZ7 849 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 IFFO2Q5TF58 517 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 CTR9Q6PD62 1173 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 NFXL1Q6ZNB6 911 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 TMEM87AQ8NBN3 555 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 NSUN7Q8NE18 718 aaKnown RBP11.38□□□□□ -0.59
PHGDH-215ENST00000641371 IGDCC4Q8TDY8 1250 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 LRRC2Q9BYS8 371 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 LY9Q9HBG7 655 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 TOMM22Q9NS69 142 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 ZSWIM5Q9P217 1185 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 NAP1L2Q9ULW6 460 aaPredicted RBP11.38□□□□□ -0.59
PHGDH-215ENST00000641371 MTMR6Q9Y217 621 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 ZDHHC9Q9Y397 364 aa11.38□□□□□ -0.59
PHGDH-215ENST00000641371 STK36Q9NRP7 1315 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 SNED1Q8TER0 1413 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 A0A0G2JLW4 131 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 PTPDC1A2A3K4 754 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 USP17L3A6NCW0 530 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 USP17L4A6NCW7 530 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 RIMBP2O15034 1052 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 NPM3O75607 178 aaKnown RBP11.37□□□□□ -0.59
PHGDH-215ENST00000641371 BTDP43251 543 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 CTDSPL2Q05D32 466 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 STK3Q13188 491 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 KLHL40Q2TBA0 621 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 C12orf60Q5U649 245 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 MCTP1Q6DN14 999 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 APOA5Q6Q788 366 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 CYB5R4Q7L1T6 521 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 USP17L1Q7RTZ2 530 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 TEX11Q8IYF3 940 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 TEKT1Q969V4 418 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 LARP6Q9BRS8 491 aaKnown RBP11.37□□□□□ -0.59
PHGDH-215ENST00000641371 RBM28Q9NW13 759 aaKnown RBP11.37□□□□□ -0.59
PHGDH-215ENST00000641371 MCM9Q9NXL9 1143 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 MKRN1Q9UHC7 482 aaKnown RBP11.37□□□□□ -0.59
PHGDH-215ENST00000641371 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.37□□□□□ -0.59
PHGDH-215ENST00000641371 CDK5RAP2Q96SN8 1893 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 MYH1P12882 1939 aa11.37□□□□□ -0.59
PHGDH-215ENST00000641371 DDX60LQ5H9U9 1706 aaKnown RBP11.36□□□□□ -0.59
PHGDH-215ENST00000641371 VPS37CA5D8V6 355 aaPredicted RBP11.36□□□□□ -0.59
PHGDH-215ENST00000641371 DDAH1O94760 285 aa11.36□□□□□ -0.59
PHGDH-215ENST00000641371 POLR3DP05423 398 aaPredicted RBP11.36□□□□□ -0.59
PHGDH-215ENST00000641371 PKP1Q13835 747 aa11.36□□□□□ -0.59
PHGDH-215ENST00000641371 RRP12Q5JTH9 1297 aaKnown RBP11.36□□□□□ -0.59
PHGDH-215ENST00000641371 CATIPQ7Z7H3 387 aa11.36□□□□□ -0.59
PHGDH-215ENST00000641371 TTC6Q86TZ1 520 aa11.36□□□□□ -0.59
PHGDH-215ENST00000641371 SYAP1Q96A49 352 aaPredicted RBP11.36□□□□□ -0.59
PHGDH-215ENST00000641371 GPR101Q96P66 508 aaPredicted RBP11.36□□□□□ -0.59
PHGDH-215ENST00000641371 MAP3K14Q99558 947 aa11.36□□□□□ -0.59
PHGDH-215ENST00000641371 TCP11L1Q9NUJ3 509 aa11.36□□□□□ -0.59
PHGDH-215ENST00000641371 TTF2Q9UNY4 1162 aaKnown RBP11.36□□□□□ -0.59
PHGDH-215ENST00000641371 GOLGA8AA7E2F4 631 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms