RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 SPECC1LQ69YQ0 1117 aa15.69■□□□□ 0.1
SCARB2-227ENST00000640957 ANKRD13DQ6ZTN6 518 aa15.69■□□□□ 0.1
SCARB2-227ENST00000640957 USP49Q70CQ1 688 aa15.69■□□□□ 0.1
SCARB2-227ENST00000640957 L1RE1Q9UN81 338 aa15.69■□□□□ 0.1
SCARB2-227ENST00000640957 KDRP35968 1356 aa15.69■□□□□ 0.1
SCARB2-227ENST00000640957 KIF5CO60282 957 aa15.69■□□□□ 0.1
SCARB2-227ENST00000640957 CABP4P57796 275 aa15.69■□□□□ 0.1
SCARB2-227ENST00000640957 USPL1Q5W0Q7 1092 aa15.69■□□□□ 0.1
SCARB2-227ENST00000640957 GUCA1BQ9UMX6 200 aa15.69■□□□□ 0.1
SCARB2-227ENST00000640957 POLR2DO15514 142 aaKnown RBP15.69■□□□□ 0.1
SCARB2-227ENST00000640957 PRC1O43663 620 aa15.69■□□□□ 0.1
SCARB2-227ENST00000640957 CCDC175P0C221 793 aa15.69■□□□□ 0.1
SCARB2-227ENST00000640957 PI16Q6UXB8 463 aa15.69■□□□□ 0.1
SCARB2-227ENST00000640957 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.68■□□□□ 0.1
SCARB2-227ENST00000640957 GUCY2CP25092 1073 aa15.68■□□□□ 0.1
SCARB2-227ENST00000640957 SLF1Q9BQI6 1058 aa15.68■□□□□ 0.1
SCARB2-227ENST00000640957 MAPK8IP1Q9UQF2 711 aa15.68■□□□□ 0.1
SCARB2-227ENST00000640957 M0R2C6 588 aa15.68■□□□□ 0.1
SCARB2-227ENST00000640957 IVLP07476 585 aa15.68■□□□□ 0.1
SCARB2-227ENST00000640957 ZNF790Q6PG37 636 aa15.68■□□□□ 0.1
SCARB2-227ENST00000640957 TOM1L2Q6ZVM7 507 aa15.68■□□□□ 0.1
SCARB2-227ENST00000640957 VPS37DQ86XT2 251 aa15.68■□□□□ 0.1
SCARB2-227ENST00000640957 KAT2BQ92831 832 aa15.68■□□□□ 0.1
SCARB2-227ENST00000640957 LLPHQ9BRT6 129 aaKnown RBP15.68■□□□□ 0.1
SCARB2-227ENST00000640957 EIF3JO75822 258 aaKnown RBP15.67■□□□□ 0.1
SCARB2-227ENST00000640957 CASP14P31944 242 aa15.67■□□□□ 0.1
SCARB2-227ENST00000640957 EXOSC10Q01780 885 aaKnown RBP15.67■□□□□ 0.1
SCARB2-227ENST00000640957 ATP2B2Q01814 1243 aa15.67■□□□□ 0.1
SCARB2-227ENST00000640957 SLC9C2Q5TAH2 1124 aa15.67■□□□□ 0.1
SCARB2-227ENST00000640957 ALG1Q9BT22 464 aa15.67■□□□□ 0.1
SCARB2-227ENST00000640957 KCNH3Q9ULD8 1083 aa15.67■□□□□ 0.1
SCARB2-227ENST00000640957 A0A1W2PQ27 194 aa15.67■□□□□ 0.1
SCARB2-227ENST00000640957 A0A1W2PQ64 194 aa15.67■□□□□ 0.1
SCARB2-227ENST00000640957 A0A1W2PQD8 194 aa15.67■□□□□ 0.1
SCARB2-227ENST00000640957 CMA1P23946 247 aa15.67■□□□□ 0.1
SCARB2-227ENST00000640957 KIF23Q02241 960 aaPredicted RBP15.67■□□□□ 0.1
SCARB2-227ENST00000640957 LMBR1LQ6UX01 489 aa15.67■□□□□ 0.1
SCARB2-227ENST00000640957 IGSF22Q8N9C0 903 aa15.67■□□□□ 0.1
SCARB2-227ENST00000640957 SERTAD1Q9UHV2 236 aa15.67■□□□□ 0.1
SCARB2-227ENST00000640957 MATR3P43243 847 aaKnown RBP eCLIP15.67■□□□□ 0.1
SCARB2-227ENST00000640957 AGLP35573 1532 aa15.67■□□□□ 0.1
SCARB2-227ENST00000640957 ATP8B1O43520 1251 aa15.66■□□□□ 0.1
SCARB2-227ENST00000640957 CCDC102BQ68D86 513 aa15.66■□□□□ 0.1
SCARB2-227ENST00000640957 MED15Q96RN5 788 aa15.66■□□□□ 0.1
SCARB2-227ENST00000640957 PSMB7Q99436 277 aa15.66■□□□□ 0.1
SCARB2-227ENST00000640957 KCNJ14Q9UNX9 436 aa15.66■□□□□ 0.1
SCARB2-227ENST00000640957 ERLIN1O75477 346 aa15.66■□□□□ 0.1
SCARB2-227ENST00000640957 PDE6BP35913 854 aa15.66■□□□□ 0.1
SCARB2-227ENST00000640957 SF3A3Q12874 501 aaKnown RBP eCLIP15.66■□□□□ 0.1
SCARB2-227ENST00000640957 BRD3Q15059 726 aa15.66■□□□□ 0.1
SCARB2-227ENST00000640957 PPFIBP1Q86W92 1011 aa15.66■□□□□ 0.1
SCARB2-227ENST00000640957 DDX21Q9NR30 783 aaKnown RBP eCLIP15.66■□□□□ 0.1
SCARB2-227ENST00000640957 CDC23Q9UJX2 597 aa15.66■□□□□ 0.1
SCARB2-227ENST00000640957 TECPR2O15040 1411 aa15.66■□□□□ 0.1
SCARB2-227ENST00000640957 CTAGE15A4D2H0 777 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 IKBKBO14920 756 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 CTAGE8P0CG41 777 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 CT47A1Q5JQC4 288 aaPredicted RBP15.65■□□□□ 0.1
SCARB2-227ENST00000640957 CTAGE6Q86UF2 777 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 CTAGE4Q8IX94 777 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 SMARCC1Q92922 1105 aaPredicted RBP15.65■□□□□ 0.1
SCARB2-227ENST00000640957 PAG1Q9NWQ8 432 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 ADGRG1Q9Y653 693 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 NRXN3Q9Y4C0 1643 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 RNF225M0QZC1 329 aaPredicted RBP15.65■□□□□ 0.1
SCARB2-227ENST00000640957 STX10O60499 249 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 ATP5JP18859 108 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 PTPN12Q05209 780 aaKnown RBP15.65■□□□□ 0.1
SCARB2-227ENST00000640957 OSBP2Q969R2 916 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 MYCBPQ99417 103 aaPredicted RBP15.65■□□□□ 0.1
SCARB2-227ENST00000640957 PRDM11Q9NQV5 511 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 PEAK1Q9H792 1746 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 ADGRL3Q9HAR2 1447 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 CTAGE9A4FU28 777 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 AKR1B15C9JRZ8 316 aaPredicted RBP15.65■□□□□ 0.1
SCARB2-227ENST00000640957 CORO7P57737 925 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 ARHGEF25Q86VW2 580 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 KLHL34Q8N239 644 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 PPM1EQ8WY54 764 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 FAM107BQ9H098 131 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 POLR3EQ9NVU0 708 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 MAN1B1Q9UKM7 699 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 ITSN1Q15811 1721 aa15.65■□□□□ 0.1
SCARB2-227ENST00000640957 XRN1Q8IZH2 1706 aaKnown RBP15.65■□□□□ 0.1
SCARB2-227ENST00000640957 hCG_1642624A0A1W2PR95 340 aa15.64■□□□□ 0.09
SCARB2-227ENST00000640957 KRT40Q6A162 431 aa15.64■□□□□ 0.09
SCARB2-227ENST00000640957 BPIFA3Q9BQP9 254 aa15.64■□□□□ 0.09
SCARB2-227ENST00000640957 VPS16Q9H269 839 aa15.64■□□□□ 0.09
SCARB2-227ENST00000640957 ALDH8A1Q9H2A2 487 aaPredicted RBP15.64■□□□□ 0.09
SCARB2-227ENST00000640957 C19orf44Q9H6X5 657 aa15.64■□□□□ 0.09
SCARB2-227ENST00000640957 MAST3O60307 1309 aa15.64■□□□□ 0.09
SCARB2-227ENST00000640957 GGCXP38435 758 aa15.64■□□□□ 0.09
SCARB2-227ENST00000640957 FXR1P51114 621 aaKnown RBP eCLIP15.64■□□□□ 0.09
SCARB2-227ENST00000640957 CTR9Q6PD62 1173 aa15.64■□□□□ 0.09
SCARB2-227ENST00000640957 AFAP1L1Q8TED9 768 aa15.64■□□□□ 0.09
SCARB2-227ENST00000640957 CENPHQ9H3R5 247 aa15.64■□□□□ 0.09
SCARB2-227ENST00000640957 YEATS4O95619 227 aa15.63■□□□□ 0.09
SCARB2-227ENST00000640957 SLC39A14Q15043 492 aa15.63■□□□□ 0.09
SCARB2-227ENST00000640957 KBTBD3Q8NAB2 608 aa15.63■□□□□ 0.09
SCARB2-227ENST00000640957 NCAPGQ9BPX3 1015 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms