RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 PPATQ06203 517 aa30.89■■■□□ 2.54
VEGFA-232ENST00000640653 CRHR2Q13324 411 aa30.89■■■□□ 2.54
VEGFA-232ENST00000640653 PICALMQ13492 652 aa30.89■■■□□ 2.54
VEGFA-232ENST00000640653 RPAP2Q8IXW5 612 aaPredicted RBP30.89■■■□□ 2.54
VEGFA-232ENST00000640653 EAF2Q96CJ1 260 aaPredicted RBP30.89■■■□□ 2.54
VEGFA-232ENST00000640653 CCDC8Q9H0W5 538 aaPredicted RBP30.89■■■□□ 2.54
VEGFA-232ENST00000640653 AK9Q5TCS8 1911 aa30.88■■■□□ 2.53
VEGFA-232ENST00000640653 CETPP11597 493 aa30.88■■■□□ 2.53
VEGFA-232ENST00000640653 RHBDL3P58872 404 aa30.88■■■□□ 2.53
VEGFA-232ENST00000640653 SNAPC2Q13487 334 aa30.88■■■□□ 2.53
VEGFA-232ENST00000640653 NOL10Q9BSC4 688 aaKnown RBP30.88■■■□□ 2.53
VEGFA-232ENST00000640653 DDX4Q9NQI0 724 aaKnown RBP30.88■■■□□ 2.53
VEGFA-232ENST00000640653 ZBTB40Q9NUA8 1239 aa30.88■■■□□ 2.53
VEGFA-232ENST00000640653 HMMRO75330 724 aa30.87■■■□□ 2.53
VEGFA-232ENST00000640653 NOL9Q5SY16 702 aaKnown RBP30.87■■■□□ 2.53
VEGFA-232ENST00000640653 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.87■■■□□ 2.53
VEGFA-232ENST00000640653 TLR7Q9NYK1 1049 aaKnown RBP30.87■■■□□ 2.53
VEGFA-232ENST00000640653 IRF6O14896 467 aa30.86■■■□□ 2.53
VEGFA-232ENST00000640653 IGSF3O75054 1194 aa30.86■■■□□ 2.53
VEGFA-232ENST00000640653 NPM3O75607 178 aaKnown RBP30.86■■■□□ 2.53
VEGFA-232ENST00000640653 ATRNL1Q5VV63 1379 aa30.86■■■□□ 2.53
VEGFA-232ENST00000640653 DOCK2Q92608 1830 aa30.85■■■□□ 2.53
VEGFA-232ENST00000640653 CYP2E1P05181 493 aaPredicted RBP30.85■■■□□ 2.53
VEGFA-232ENST00000640653 NAA16Q6N069 864 aaPredicted RBP30.85■■■□□ 2.53
VEGFA-232ENST00000640653 SH3BP5LQ7L8J4 393 aa30.85■■■□□ 2.53
VEGFA-232ENST00000640653 DDTLA6NHG4 134 aaPredicted RBP30.84■■■□□ 2.53
VEGFA-232ENST00000640653 ZAP70P43403 619 aa30.84■■■□□ 2.53
VEGFA-232ENST00000640653 TAF1CQ15572 869 aaPredicted RBP30.84■■■□□ 2.53
VEGFA-232ENST00000640653 ZFYVE28Q9HCC9 887 aa30.84■■■□□ 2.53
VEGFA-232ENST00000640653 BAG3O95817 575 aa30.83■■■□□ 2.53
VEGFA-232ENST00000640653 AACSQ86V21 672 aa30.83■■■□□ 2.53
VEGFA-232ENST00000640653 FAM43AQ8N2R8 423 aa30.83■■■□□ 2.53
VEGFA-232ENST00000640653 ERO1AQ96HE7 468 aa30.83■■■□□ 2.53
VEGFA-232ENST00000640653 ZCCHC17Q9NP64 241 aaKnown RBP30.83■■■□□ 2.53
VEGFA-232ENST00000640653 MAST2Q6P0Q8 1798 aa30.82■■■□□ 2.52
VEGFA-232ENST00000640653 MAP3K10Q02779 954 aa30.82■■■□□ 2.52
VEGFA-232ENST00000640653 PDE3AQ14432 1141 aa30.82■■■□□ 2.52
VEGFA-232ENST00000640653 TEX11Q8IYF3 940 aa30.82■■■□□ 2.52
VEGFA-232ENST00000640653 RHPN1Q8TCX5 695 aa30.82■■■□□ 2.52
VEGFA-232ENST00000640653 PHF20L1A8MW92 1017 aa30.81■■■□□ 2.52
VEGFA-232ENST00000640653 PLCG2P16885 1265 aa30.81■■■□□ 2.52
VEGFA-232ENST00000640653 FBXO46Q6PJ61 603 aaPredicted RBP30.81■■■□□ 2.52
VEGFA-232ENST00000640653 HPS5Q9UPZ3 1129 aa30.81■■■□□ 2.52
VEGFA-232ENST00000640653 SP3Q02447 781 aa30.8■■■□□ 2.52
VEGFA-232ENST00000640653 KIF1BPQ96EK5 621 aa30.8■■■□□ 2.52
VEGFA-232ENST00000640653 PICK1Q9NRD5 415 aa30.8■■■□□ 2.52
VEGFA-232ENST00000640653 KCNH4Q9UQ05 1017 aa30.8■■■□□ 2.52
VEGFA-232ENST00000640653 COL2A1P02458 1487 aaPredicted RBP30.79■■■□□ 2.52
VEGFA-232ENST00000640653 BTBD19C9JJ37 291 aa30.79■■■□□ 2.52
VEGFA-232ENST00000640653 SCYL3Q8IZE3 742 aa30.79■■■□□ 2.52
VEGFA-232ENST00000640653 CLASRPQ8N2M8 674 aaKnown RBP30.79■■■□□ 2.52
VEGFA-232ENST00000640653 OSBPL5Q9H0X9 879 aaPredicted RBP30.79■■■□□ 2.52
VEGFA-232ENST00000640653 IL1RAPL2Q9NP60 686 aa30.79■■■□□ 2.52
VEGFA-232ENST00000640653 PIH1D3Q9NQM4 214 aaKnown RBP30.79■■■□□ 2.52
VEGFA-232ENST00000640653 AATFQ9NY61 560 aaKnown RBP eCLIP30.79■■■□□ 2.52
VEGFA-232ENST00000640653 TRIM17Q9Y577 477 aa30.79■■■□□ 2.52
VEGFA-232ENST00000640653 SIRT2Q8IXJ6 389 aa30.78■■■□□ 2.52
VEGFA-232ENST00000640653 SH3RF3Q8TEJ3 882 aaPredicted RBP30.78■■■□□ 2.52
VEGFA-232ENST00000640653 TBC1D12O60347 775 aa30.77■■■□□ 2.52
VEGFA-232ENST00000640653 RGS19P49795 217 aa30.77■■■□□ 2.52
VEGFA-232ENST00000640653 PPP4CP60510 307 aa30.77■■■□□ 2.52
VEGFA-232ENST00000640653 CD99L2Q8TCZ2 262 aa30.77■■■□□ 2.52
VEGFA-232ENST00000640653 APBB1O00213 710 aa30.76■■■□□ 2.51
VEGFA-232ENST00000640653 CTNND1O60716 968 aaKnown RBP30.76■■■□□ 2.51
VEGFA-232ENST00000640653 RAB11FIP3O75154 756 aa30.76■■■□□ 2.51
VEGFA-232ENST00000640653 C20orf194Q5TEA3 1177 aa30.76■■■□□ 2.51
VEGFA-232ENST00000640653 OTOP1Q7RTM1 612 aa30.76■■■□□ 2.51
VEGFA-232ENST00000640653 CXCL11O14625 94 aa30.75■■■□□ 2.51
VEGFA-232ENST00000640653 IDH1O75874 414 aaKnown RBP30.75■■■□□ 2.51
VEGFA-232ENST00000640653 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.75■■■□□ 2.513e-7■■■■■ 34.2
VEGFA-232ENST00000640653 PTPRAP18433 802 aa30.74■■■□□ 2.51
VEGFA-232ENST00000640653 ANKRD23Q86SG2 305 aa30.74■■■□□ 2.51
VEGFA-232ENST00000640653 ADGRA1Q86SQ6 560 aa30.74■■■□□ 2.51
VEGFA-232ENST00000640653 ZHX2Q9Y6X8 837 aa30.74■■■□□ 2.51
VEGFA-232ENST00000640653 TLR2O60603 784 aa30.73■■■□□ 2.51
VEGFA-232ENST00000640653 IFIT2P09913 472 aaKnown RBP30.73■■■□□ 2.51
VEGFA-232ENST00000640653 ARHGEF6Q15052 776 aa30.73■■■□□ 2.51
VEGFA-232ENST00000640653 DHX36Q9H2U1 1008 aaKnown RBP30.73■■■□□ 2.51
VEGFA-232ENST00000640653 EFCC1Q9HA90 598 aa30.73■■■□□ 2.51
VEGFA-232ENST00000640653 SLURP2P0DP57 97 aa30.72■■■□□ 2.51
VEGFA-232ENST00000640653 CYP7A1P22680 504 aa30.72■■■□□ 2.51
VEGFA-232ENST00000640653 MLLT1Q03111 559 aaPredicted RBP30.72■■■□□ 2.51
VEGFA-232ENST00000640653 TMED8Q6PL24 325 aaPredicted RBP30.72■■■□□ 2.51
VEGFA-232ENST00000640653 CERS3Q8IU89 383 aa30.72■■■□□ 2.51
VEGFA-232ENST00000640653 TGFBRAP1Q8WUH2 860 aa30.72■■■□□ 2.51
VEGFA-232ENST00000640653 NDUFB9Q9Y6M9 179 aa30.72■■■□□ 2.51
VEGFA-232ENST00000640653 MAP3K12Q12852 859 aa30.71■■■□□ 2.51
VEGFA-232ENST00000640653 HERC5Q9UII4 1024 aaKnown RBP30.71■■■□□ 2.51
VEGFA-232ENST00000640653 PDHXO00330 501 aa30.7■■■□□ 2.51
VEGFA-232ENST00000640653 MAGEB6Q8N7X4 407 aa30.7■■■□□ 2.51
VEGFA-232ENST00000640653 ANTXR1Q9H6X2 564 aa30.7■■■□□ 2.51
VEGFA-232ENST00000640653 PI4KBQ9UBF8 816 aa30.7■■■□□ 2.51
VEGFA-232ENST00000640653 AFG3L2Q9Y4W6 797 aa30.7■■■□□ 2.51
VEGFA-232ENST00000640653 FLT1P17948 1338 aa30.7■■■□□ 2.5
VEGFA-232ENST00000640653 FAM196BA6NMK8 535 aa30.69■■■□□ 2.5
VEGFA-232ENST00000640653 SOX10P56693 466 aa30.69■■■□□ 2.5
VEGFA-232ENST00000640653 MOGSQ13724 837 aa30.69■■■□□ 2.5
VEGFA-232ENST00000640653 TTF1Q15361 905 aaPredicted RBP30.69■■■□□ 2.5
VEGFA-232ENST00000640653 FASTKD5Q7L8L6 764 aaKnown RBP30.69■■■□□ 2.5
VEGFA-232ENST00000640653 MAPKAPK5Q8IW41 473 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms