RNA–Protein interactions for RNA: ENST00000638762.1

PAX6-239, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-239ENST00000638762 TUBB4AP04350 444 aa13.68□□□□□ -0.22
PAX6-239ENST00000638762 SLC3A2P08195 630 aaKnown RBP13.68□□□□□ -0.22
PAX6-239ENST00000638762 SIK1P57059 783 aa13.68□□□□□ -0.22
PAX6-239ENST00000638762 GUCY1B3Q02153 619 aa13.68□□□□□ -0.22
PAX6-239ENST00000638762 UBE4AQ14139 1066 aa13.68□□□□□ -0.22
PAX6-239ENST00000638762 SAFBQ15424 915 aaKnown RBP eCLIP13.68□□□□□ -0.22
PAX6-239ENST00000638762 AXDND1Q5T1B0 1012 aaPredicted RBP13.68□□□□□ -0.22
PAX6-239ENST00000638762 KRT40Q6A162 431 aa13.68□□□□□ -0.22
PAX6-239ENST00000638762 NFXL1Q6ZNB6 911 aa13.68□□□□□ -0.22
PAX6-239ENST00000638762 DHX40Q8IX18 779 aaKnown RBP13.68□□□□□ -0.22
PAX6-239ENST00000638762 TRIM22Q8IYM9 498 aa13.68□□□□□ -0.22
PAX6-239ENST00000638762 PAXBP1Q9Y5B6 917 aa13.68□□□□□ -0.22
PAX6-239ENST00000638762 ZNF804BA4D1E1 1349 aa13.67□□□□□ -0.22
PAX6-239ENST00000638762 ECM29Q5VYK3 1845 aa13.67□□□□□ -0.22
PAX6-239ENST00000638762 PTGS1P23219 599 aa13.67□□□□□ -0.22
PAX6-239ENST00000638762 GNL2Q13823 731 aaKnown RBP13.67□□□□□ -0.22
PAX6-239ENST00000638762 SF3B3Q15393 1217 aaKnown RBP13.67□□□□□ -0.22
PAX6-239ENST00000638762 SYCP1Q15431 976 aa13.67□□□□□ -0.22
PAX6-239ENST00000638762 GPHNQ9NQX3 736 aaPredicted RBP13.67□□□□□ -0.22
PAX6-239ENST00000638762 HPSEQ9Y251 543 aa13.67□□□□□ -0.22
PAX6-239ENST00000638762 GSG1L2A8MUP6 293 aa13.67□□□□□ -0.22
PAX6-239ENST00000638762 IFIT3O14879 490 aaKnown RBP13.67□□□□□ -0.22
PAX6-239ENST00000638762 ZNF202O95125 648 aa13.67□□□□□ -0.22
PAX6-239ENST00000638762 MBD4O95243 580 aa13.67□□□□□ -0.22
PAX6-239ENST00000638762 KCNJ6P48051 423 aa13.67□□□□□ -0.22
PAX6-239ENST00000638762 NDUFA8P51970 172 aa13.67□□□□□ -0.22
PAX6-239ENST00000638762 C11orf57Q6ZUT1 292 aaPredicted RBP13.67□□□□□ -0.22
PAX6-239ENST00000638762 VPS37DQ86XT2 251 aa13.67□□□□□ -0.22
PAX6-239ENST00000638762 C17orf53Q8N3J3 647 aaPredicted RBP13.67□□□□□ -0.22
PAX6-239ENST00000638762 ARID3AQ99856 593 aa13.67□□□□□ -0.22
PAX6-239ENST00000638762 FOXP1Q9H334 677 aaPredicted RBP13.67□□□□□ -0.22
PAX6-239ENST00000638762 A0A1B0GUL6 1792 aa13.66□□□□□ -0.22
PAX6-239ENST00000638762 BCL9LQ86UU0 1499 aa13.66□□□□□ -0.22
PAX6-239ENST00000638762 B4E1Z4 1266 aa13.66□□□□□ -0.22
PAX6-239ENST00000638762 KIF2AO00139 706 aaPredicted RBP13.66□□□□□ -0.22
PAX6-239ENST00000638762 TULP1O00294 542 aaPredicted RBP13.66□□□□□ -0.22
PAX6-239ENST00000638762 FTOQ9C0B1 505 aaKnown RBP eCLIP13.66□□□□□ -0.22
PAX6-239ENST00000638762 OSBPL5Q9H0X9 879 aaPredicted RBP13.66□□□□□ -0.22
PAX6-239ENST00000638762 PYCARDQ9ULZ3 195 aa13.66□□□□□ -0.22
PAX6-239ENST00000638762 CEP131Q9UPN4 1083 aa13.66□□□□□ -0.22
PAX6-239ENST00000638762 NRDCO43847 1150 aa13.66□□□□□ -0.22
PAX6-239ENST00000638762 POLR3DP05423 398 aaPredicted RBP13.66□□□□□ -0.22
PAX6-239ENST00000638762 TUBE1Q9UJT0 475 aa13.66□□□□□ -0.22
PAX6-239ENST00000638762 NEDD4P46934 1319 aa13.66□□□□□ -0.22
PAX6-239ENST00000638762 SPATA31A5Q5VU36 1347 aa13.66□□□□□ -0.22
PAX6-239ENST00000638762 SPATA31A7Q8IWB4 1347 aa13.66□□□□□ -0.22
PAX6-239ENST00000638762 GOLGB1Q14789 3259 aaKnown RBP13.65□□□□□ -0.22
PAX6-239ENST00000638762 DEXIO95424 95 aa13.65□□□□□ -0.22
PAX6-239ENST00000638762 FOSBP53539 338 aa13.65□□□□□ -0.22
PAX6-239ENST00000638762 RILPL1Q5EBL4 403 aa13.65□□□□□ -0.22
PAX6-239ENST00000638762 LRRC8AQ8IWT6 810 aa13.65□□□□□ -0.22
PAX6-239ENST00000638762 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.65□□□□□ -0.22
PAX6-239ENST00000638762 EPB41L4AQ9HCS5 686 aaPredicted RBP13.65□□□□□ -0.22
PAX6-239ENST00000638762 ZSWIM5Q9P217 1185 aa13.65□□□□□ -0.22
PAX6-239ENST00000638762 A0A1B0GVL5 298 aa13.65□□□□□ -0.22
PAX6-239ENST00000638762 TDO2P48775 406 aa13.65□□□□□ -0.22
PAX6-239ENST00000638762 WTAPQ15007 396 aa13.65□□□□□ -0.22
PAX6-239ENST00000638762 PTPAQ15257 358 aa13.65□□□□□ -0.22
PAX6-239ENST00000638762 CT47A1Q5JQC4 288 aaPredicted RBP13.65□□□□□ -0.22
PAX6-239ENST00000638762 SLC10A5Q5PT55 438 aa13.65□□□□□ -0.22
PAX6-239ENST00000638762 RESP18Q5W5W9 173 aa13.65□□□□□ -0.22
PAX6-239ENST00000638762 ZNF579Q8NAF0 562 aaKnown RBP13.65□□□□□ -0.22
PAX6-239ENST00000638762 CCDC150Q8NCX0 1101 aa13.65□□□□□ -0.22
PAX6-239ENST00000638762 MAP3K14Q99558 947 aa13.65□□□□□ -0.22
PAX6-239ENST00000638762 BSDC1Q9NW68 430 aaPredicted RBP13.65□□□□□ -0.22
PAX6-239ENST00000638762 DENND2AQ9ULE3 1009 aa13.65□□□□□ -0.22
PAX6-239ENST00000638762 NIP7Q9Y221 180 aaKnown RBP eCLIP13.65□□□□□ -0.22
PAX6-239ENST00000638762 KIF28PB7ZC32 967 aa13.64□□□□□ -0.23
PAX6-239ENST00000638762 PFKFB1P16118 471 aa13.64□□□□□ -0.23
PAX6-239ENST00000638762 XBP1P17861 261 aa13.64□□□□□ -0.23
PAX6-239ENST00000638762 SYKP43405 635 aa13.64□□□□□ -0.23
PAX6-239ENST00000638762 CHRNDQ07001 517 aa13.64□□□□□ -0.23
PAX6-239ENST00000638762 CCDC34Q96HJ3 373 aa13.64□□□□□ -0.23
PAX6-239ENST00000638762 SLC4A4Q9Y6R1 1079 aa13.64□□□□□ -0.23
PAX6-239ENST00000638762 CBFA2T2O43439 604 aa13.64□□□□□ -0.23
PAX6-239ENST00000638762 CALM1P0DP23 149 aa13.64□□□□□ -0.23
PAX6-239ENST00000638762 CALM2P0DP24 149 aa13.64□□□□□ -0.23
PAX6-239ENST00000638762 CALM3P0DP25 149 aa13.64□□□□□ -0.23
PAX6-239ENST00000638762 CDC27P30260 824 aa13.64□□□□□ -0.23
PAX6-239ENST00000638762 RTN1Q16799 776 aa13.64□□□□□ -0.23
PAX6-239ENST00000638762 KANK3Q6NY19 840 aa13.64□□□□□ -0.23
PAX6-239ENST00000638762 ESR2Q92731 530 aa13.64□□□□□ -0.23
PAX6-239ENST00000638762 BRIP1Q9BX63 1249 aa13.64□□□□□ -0.23
PAX6-239ENST00000638762 FAM217BQ9NTX9 383 aaPredicted RBP13.64□□□□□ -0.23
PAX6-239ENST00000638762 LRP2BPQ9P2M1 347 aa13.64□□□□□ -0.23
PAX6-239ENST00000638762 SCN7AQ01118 1682 aa13.63□□□□□ -0.23
PAX6-239ENST00000638762 BMP15O95972 392 aa13.63□□□□□ -0.23
PAX6-239ENST00000638762 CAVIN4Q5BKX8 364 aa13.63□□□□□ -0.23
PAX6-239ENST00000638762 ANKRD18AQ8IVF6 992 aa13.63□□□□□ -0.23
PAX6-239ENST00000638762 NOSTRINQ8IVI9 506 aa13.63□□□□□ -0.23
PAX6-239ENST00000638762 TSC1Q92574 1164 aa13.63□□□□□ -0.23
PAX6-239ENST00000638762 NGLY1Q96IV0 654 aa13.63□□□□□ -0.23
PAX6-239ENST00000638762 RBM28Q9NW13 759 aaKnown RBP13.63□□□□□ -0.23
PAX6-239ENST00000638762 KAT6BQ8WYB5 2073 aa13.63□□□□□ -0.23
PAX6-239ENST00000638762 MYH14Q7Z406 1995 aaKnown RBP13.63□□□□□ -0.23
PAX6-239ENST00000638762 DLEC1Q9Y238 1755 aa13.63□□□□□ -0.23
PAX6-239ENST00000638762 CNTNAP4Q9C0A0 1308 aa13.63□□□□□ -0.23
PAX6-239ENST00000638762 MMP1P03956 469 aa13.63□□□□□ -0.23
PAX6-239ENST00000638762 MICU3Q86XE3 530 aa13.63□□□□□ -0.23
PAX6-239ENST00000638762 RNF26Q9BY78 433 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms