RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 ORC3Q9UBD5 711 aaPredicted RBP19.4■□□□□ 0.7
HCG27-205ENST00000638546 ELP1O95163 1332 aa19.4■□□□□ 0.7
HCG27-205ENST00000638546 CDKL5O76039 1030 aa19.4■□□□□ 0.7
HCG27-205ENST00000638546 LDHCP07864 332 aa19.4■□□□□ 0.7
HCG27-205ENST00000638546 MMP10P09238 476 aa19.4■□□□□ 0.7
HCG27-205ENST00000638546 CTR9Q6PD62 1173 aa19.4■□□□□ 0.7
HCG27-205ENST00000638546 SYNE3Q6ZMZ3 975 aa19.4■□□□□ 0.7
HCG27-205ENST00000638546 ESR2Q92731 530 aa19.4■□□□□ 0.7
HCG27-205ENST00000638546 SENP2Q9HC62 589 aa19.4■□□□□ 0.7
HCG27-205ENST00000638546 ATP6V0A2Q9Y487 856 aa19.4■□□□□ 0.7
HCG27-205ENST00000638546 RGPD3A6NKT7 1758 aaPredicted RBP19.39■□□□□ 0.7
HCG27-205ENST00000638546 RGPD4Q7Z3J3 1758 aa19.39■□□□□ 0.7
HCG27-205ENST00000638546 ERICH2A1L162 156 aa19.39■□□□□ 0.69
HCG27-205ENST00000638546 SRGNP10124 158 aa19.39■□□□□ 0.69
HCG27-205ENST00000638546 STK11IPQ8N1F8 1099 aa19.39■□□□□ 0.69
HCG27-205ENST00000638546 RGS22Q8NE09 1264 aa19.39■□□□□ 0.69
HCG27-205ENST00000638546 POLLQ9UGP5 575 aa19.39■□□□□ 0.69
HCG27-205ENST00000638546 SLC12A7Q9Y666 1083 aa19.39■□□□□ 0.69
HCG27-205ENST00000638546 GOLGA8AA7E2F4 631 aa19.38■□□□□ 0.69
HCG27-205ENST00000638546 C6orf229H3BNL8 230 aa19.38■□□□□ 0.69
HCG27-205ENST00000638546 FGRP09769 529 aa19.38■□□□□ 0.69
HCG27-205ENST00000638546 ALDH1B1P30837 517 aa19.38■□□□□ 0.69
HCG27-205ENST00000638546 FOSBP53539 338 aa19.38■□□□□ 0.69
HCG27-205ENST00000638546 WTAPQ15007 396 aa19.38■□□□□ 0.69
HCG27-205ENST00000638546 EZH2Q15910 746 aaKnown RBP19.38■□□□□ 0.69
HCG27-205ENST00000638546 SBK1Q52WX2 424 aa19.38■□□□□ 0.69
HCG27-205ENST00000638546 CAMKK2Q96RR4 588 aa19.38■□□□□ 0.69
HCG27-205ENST00000638546 TFIP11Q9UBB9 837 aaKnown RBP19.38■□□□□ 0.69
HCG27-205ENST00000638546 USP17L12C9JPN9 530 aa19.37■□□□□ 0.69
HCG27-205ENST00000638546 USP17L21D6R901 530 aa19.37■□□□□ 0.69
HCG27-205ENST00000638546 ADD1P35611 737 aaKnown RBP19.37■□□□□ 0.69
HCG27-205ENST00000638546 DEFB132Q7Z7B7 95 aa19.37■□□□□ 0.69
HCG27-205ENST00000638546 TTC6Q86TZ1 520 aa19.37■□□□□ 0.69
HCG27-205ENST00000638546 C8orf76Q96K31 380 aa19.37■□□□□ 0.69
HCG27-205ENST00000638546 DCP1AQ9NPI6 582 aaPredicted RBP19.37■□□□□ 0.69
HCG27-205ENST00000638546 CFAP45Q9UL16 551 aa19.37■□□□□ 0.69
HCG27-205ENST00000638546 PPFIA3O75145 1194 aa19.36■□□□□ 0.69
HCG27-205ENST00000638546 BAG3O95817 575 aa19.36■□□□□ 0.69
HCG27-205ENST00000638546 PPP4CP60510 307 aa19.36■□□□□ 0.69
HCG27-205ENST00000638546 ATL3Q6DD88 541 aa19.36■□□□□ 0.69
HCG27-205ENST00000638546 LRSAM1Q6UWE0 723 aa19.36■□□□□ 0.69
HCG27-205ENST00000638546 SPATA32Q96LK8 384 aa19.36■□□□□ 0.69
HCG27-205ENST00000638546 NOL10Q9BSC4 688 aaKnown RBP19.36■□□□□ 0.69
HCG27-205ENST00000638546 UBAC1Q9BSL1 405 aa19.36■□□□□ 0.69
HCG27-205ENST00000638546 MAST2Q6P0Q8 1798 aa19.36■□□□□ 0.69
HCG27-205ENST00000638546 CYP2D7A0A087X1C5 515 aa19.36■□□□□ 0.69
HCG27-205ENST00000638546 SLC3A2P08195 630 aaKnown RBP19.36■□□□□ 0.69
HCG27-205ENST00000638546 CDC27P30260 824 aa19.36■□□□□ 0.69
HCG27-205ENST00000638546 GUCY1B3Q02153 619 aa19.36■□□□□ 0.69
HCG27-205ENST00000638546 CCDC183Q5T5S1 534 aa19.36■□□□□ 0.69
HCG27-205ENST00000638546 MICU3Q86XE3 530 aa19.36■□□□□ 0.69
HCG27-205ENST00000638546 LEO1Q8WVC0 666 aaPredicted RBP19.36■□□□□ 0.69
HCG27-205ENST00000638546 ZNF396Q96N95 335 aaPredicted RBP19.36■□□□□ 0.69
HCG27-205ENST00000638546 ZKSCAN3Q9BRR0 538 aa19.36■□□□□ 0.69
HCG27-205ENST00000638546 ARPP21Q9UBL0 812 aaPredicted RBP19.36■□□□□ 0.69
HCG27-205ENST00000638546 NRXN2Q9P2S2 1712 aa19.35■□□□□ 0.69
HCG27-205ENST00000638546 SYCE3A1L190 88 aa19.35■□□□□ 0.69
HCG27-205ENST00000638546 LETM1O95202 739 aaPredicted RBP19.35■□□□□ 0.69
HCG27-205ENST00000638546 RXRAP19793 462 aa19.35■□□□□ 0.69
HCG27-205ENST00000638546 RCAN1P53805 252 aa19.35■□□□□ 0.69
HCG27-205ENST00000638546 GRIK5Q16478 980 aa19.35■□□□□ 0.69
HCG27-205ENST00000638546 CERS3Q8IU89 383 aa19.35■□□□□ 0.69
HCG27-205ENST00000638546 TBC1D22AQ8WUA7 517 aa19.35■□□□□ 0.69
HCG27-205ENST00000638546 MASTLQ96GX5 879 aa19.35■□□□□ 0.69
HCG27-205ENST00000638546 FAM217BQ9NTX9 383 aaPredicted RBP19.35■□□□□ 0.69
HCG27-205ENST00000638546 NID2Q14112 1375 aa19.35■□□□□ 0.69
HCG27-205ENST00000638546 MYH13Q9UKX3 1938 aa19.34■□□□□ 0.69
HCG27-205ENST00000638546 ORC4O43929 436 aa19.34■□□□□ 0.69
HCG27-205ENST00000638546 MSL1Q68DK7 614 aa19.34■□□□□ 0.69
HCG27-205ENST00000638546 MPNDQ8N594 471 aa19.34■□□□□ 0.69
HCG27-205ENST00000638546 FBXO18Q8NFZ0 1043 aa19.34■□□□□ 0.69
HCG27-205ENST00000638546 TMX4Q9H1E5 349 aaPredicted RBP19.34■□□□□ 0.69
HCG27-205ENST00000638546 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.34■□□□□ 0.69
HCG27-205ENST00000638546 FAM205AQ6ZU69 1335 aa19.34■□□□□ 0.69
HCG27-205ENST00000638546 SMIM22K7EJ46 135 aa19.33■□□□□ 0.69
HCG27-205ENST00000638546 IARSP41252 1262 aaKnown RBP19.33■□□□□ 0.69
HCG27-205ENST00000638546 SEC23AQ15436 765 aa19.33■□□□□ 0.69
HCG27-205ENST00000638546 NTRK3Q16288 839 aa19.33■□□□□ 0.69
HCG27-205ENST00000638546 CCDC144CPQ8IYA2 1237 aa19.33■□□□□ 0.69
HCG27-205ENST00000638546 ZSCAN10Q96SZ4 725 aaPredicted RBP19.33■□□□□ 0.69
HCG27-205ENST00000638546 COA1Q9GZY4 146 aa19.33■□□□□ 0.69
HCG27-205ENST00000638546 MROH7-TTC4A0A0A0MT08 1334 aa19.33■□□□□ 0.68
HCG27-205ENST00000638546 DUOX1Q9NRD9 1551 aa19.33■□□□□ 0.68
HCG27-205ENST00000638546 USP5P45974 858 aa19.33■□□□□ 0.68
HCG27-205ENST00000638546 DIXDC1Q155Q3 683 aa19.33■□□□□ 0.68
HCG27-205ENST00000638546 SLC15A2Q16348 729 aa19.33■□□□□ 0.68
HCG27-205ENST00000638546 RTN1Q16799 776 aa19.33■□□□□ 0.68
HCG27-205ENST00000638546 TPRNQ4KMQ1 711 aa19.33■□□□□ 0.68
HCG27-205ENST00000638546 SLF2Q8IX21 1173 aa19.33■□□□□ 0.68
HCG27-205ENST00000638546 SH3RF3Q8TEJ3 882 aaPredicted RBP19.33■□□□□ 0.68
HCG27-205ENST00000638546 ALG1Q9BT22 464 aa19.33■□□□□ 0.68
HCG27-205ENST00000638546 MYL10Q9BUA6 226 aa19.33■□□□□ 0.68
HCG27-205ENST00000638546 STK32BQ9NY57 414 aa19.33■□□□□ 0.68
HCG27-205ENST00000638546 TNKSO95271 1327 aa19.32■□□□□ 0.68
HCG27-205ENST00000638546 STK36Q9NRP7 1315 aa19.32■□□□□ 0.68
HCG27-205ENST00000638546 CCDC196A0A1B0GTZ2 297 aa19.32■□□□□ 0.68
HCG27-205ENST00000638546 GOLGA6L4A6NEF3 574 aa19.32■□□□□ 0.68
HCG27-205ENST00000638546 RANBP6O60518 1105 aaKnown RBP19.32■□□□□ 0.68
HCG27-205ENST00000638546 NT5C2P49902 561 aa19.32■□□□□ 0.68
HCG27-205ENST00000638546 SSRP1Q08945 709 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms