RNA–Protein interactions for RNA: ENST00000638041.1

MECP2-225, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-225ENST00000638041 CRNKL1Q9BZJ0 848 aaKnown RBP8.61□□□□□ -1.03
MECP2-225ENST00000638041 TMEM39BQ9GZU3 492 aa8.61□□□□□ -1.03
MECP2-225ENST00000638041 CCDC8Q9H0W5 538 aaPredicted RBP8.61□□□□□ -1.03
MECP2-225ENST00000638041 OSBPL5Q9H0X9 879 aaPredicted RBP8.61□□□□□ -1.03
MECP2-225ENST00000638041 BCL11AQ9H165 835 aa8.61□□□□□ -1.03
MECP2-225ENST00000638041 RNF39Q9H2S5 420 aa8.61□□□□□ -1.03
MECP2-225ENST00000638041 ELP3Q9H9T3 547 aa8.61□□□□□ -1.03
MECP2-225ENST00000638041 CABP5Q9NP86 173 aa8.61□□□□□ -1.03
MECP2-225ENST00000638041 RNF186Q9NXI6 227 aa8.61□□□□□ -1.03
MECP2-225ENST00000638041 EXOC6BQ9Y2D4 811 aa8.61□□□□□ -1.03
MECP2-225ENST00000638041 GAKO14976 1311 aa8.6□□□□□ -1.03
MECP2-225ENST00000638041 ASTN2O75129 1339 aaPredicted RBP8.6□□□□□ -1.03
MECP2-225ENST00000638041 COL4A1P02462 1669 aa8.6□□□□□ -1.03
MECP2-225ENST00000638041 FAM155AB1AL88 458 aaPredicted RBP8.6□□□□□ -1.03
MECP2-225ENST00000638041 APBB1O00213 710 aa8.6□□□□□ -1.03
MECP2-225ENST00000638041 CXCL11O14625 94 aa8.6□□□□□ -1.03
MECP2-225ENST00000638041 TBC1D12O60347 775 aa8.6□□□□□ -1.03
MECP2-225ENST00000638041 ZFYP08048 801 aaPredicted RBP8.6□□□□□ -1.03
MECP2-225ENST00000638041 CYP7A1P22680 504 aa8.6□□□□□ -1.03
MECP2-225ENST00000638041 RGS3P49796 1198 aa8.6□□□□□ -1.03
MECP2-225ENST00000638041 FMR1Q06787 632 aaKnown RBP eCLIP8.6□□□□□ -1.03
MECP2-225ENST00000638041 DGKZQ13574 1117 aa8.6□□□□□ -1.03
MECP2-225ENST00000638041 CTU1Q7Z7A3 348 aaKnown RBP8.6□□□□□ -1.03
MECP2-225ENST00000638041 IFNL1Q8IU54 200 aa8.6□□□□□ -1.03
MECP2-225ENST00000638041 CCAR1Q8IX12 1150 aaKnown RBP8.6□□□□□ -1.03
MECP2-225ENST00000638041 NSUN4Q96CB9 384 aaKnown RBP8.6□□□□□ -1.03
MECP2-225ENST00000638041 CFHR5Q9BXR6 569 aa8.6□□□□□ -1.03
MECP2-225ENST00000638041 CCL15-CCL14A0A0B4J2E2 113 aa8.59□□□□□ -1.03
MECP2-225ENST00000638041 SPDYE5A6NIY4 337 aa8.59□□□□□ -1.03
MECP2-225ENST00000638041 POLR3DP05423 398 aaPredicted RBP8.59□□□□□ -1.03
MECP2-225ENST00000638041 SLC3A2P08195 630 aaKnown RBP8.59□□□□□ -1.03
MECP2-225ENST00000638041 ASNSP08243 561 aa8.59□□□□□ -1.03
MECP2-225ENST00000638041 CAPN2P17655 700 aa8.59□□□□□ -1.03
MECP2-225ENST00000638041 MCAMP43121 646 aa8.59□□□□□ -1.03
MECP2-225ENST00000638041 PRMT2P55345 433 aa8.59□□□□□ -1.03
MECP2-225ENST00000638041 RRP1P56182 461 aaKnown RBP8.59□□□□□ -1.03
MECP2-225ENST00000638041 PPP4CP60510 307 aa8.59□□□□□ -1.03
MECP2-225ENST00000638041 VGLL4Q14135 290 aa8.59□□□□□ -1.03
MECP2-225ENST00000638041 TAF1CQ15572 869 aaPredicted RBP8.59□□□□□ -1.03
MECP2-225ENST00000638041 DIXDC1Q155Q3 683 aa8.59□□□□□ -1.03
MECP2-225ENST00000638041 CCL15Q16663 113 aa8.59□□□□□ -1.03
MECP2-225ENST00000638041 PPP4R3BQ5MIZ7 849 aa8.59□□□□□ -1.03
MECP2-225ENST00000638041 TICAM2Q86XR7 235 aa8.59□□□□□ -1.03
MECP2-225ENST00000638041 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.59□□□□□ -1.03
MECP2-225ENST00000638041 GTF3C2Q8WUA4 911 aaPredicted RBP8.59□□□□□ -1.03
MECP2-225ENST00000638041 OTUD5Q96G74 571 aa8.59□□□□□ -1.03
MECP2-225ENST00000638041 PARK7Q99497 189 aaKnown RBP8.59□□□□□ -1.03
MECP2-225ENST00000638041 DNAJC2Q99543 621 aaKnown RBP8.59□□□□□ -1.03
MECP2-225ENST00000638041 DBNDD2Q9BQY9 259 aa8.59□□□□□ -1.03
MECP2-225ENST00000638041 CWC22Q9HCG8 908 aaKnown RBP8.59□□□□□ -1.03
MECP2-225ENST00000638041 TMOD4Q9NZQ9 345 aa8.59□□□□□ -1.03
MECP2-225ENST00000638041 THSD7BQ9C0I4 1608 aa8.58□□□□□ -1.04
MECP2-225ENST00000638041 MAGEB6P1A0A0J9YX57 407 aa8.58□□□□□ -1.04
MECP2-225ENST00000638041 GPR25O00155 361 aa8.58□□□□□ -1.04
MECP2-225ENST00000638041 RLBP1P12271 317 aa8.58□□□□□ -1.04
MECP2-225ENST00000638041 GNAT2P19087 354 aa8.58□□□□□ -1.04
MECP2-225ENST00000638041 OSBPP22059 807 aa8.58□□□□□ -1.04
MECP2-225ENST00000638041 MFAP1P55081 439 aaKnown RBP8.58□□□□□ -1.04
MECP2-225ENST00000638041 SP3Q02447 781 aa8.58□□□□□ -1.04
MECP2-225ENST00000638041 MKRN3Q13064 507 aaKnown RBP8.58□□□□□ -1.04
MECP2-225ENST00000638041 NOL9Q5SY16 702 aaKnown RBP8.58□□□□□ -1.04
MECP2-225ENST00000638041 SLC9C2Q5TAH2 1124 aa8.58□□□□□ -1.04
MECP2-225ENST00000638041 COL13A1Q5TAT6 717 aaPredicted RBP8.58□□□□□ -1.04
MECP2-225ENST00000638041 SCYL3Q8IZE3 742 aa8.58□□□□□ -1.04
MECP2-225ENST00000638041 MAGEB6Q8N7X4 407 aa8.58□□□□□ -1.04
MECP2-225ENST00000638041 NACAP1Q9BZK3 213 aa8.58□□□□□ -1.04
MECP2-225ENST00000638041 SH2D4AQ9H788 454 aa8.58□□□□□ -1.04
MECP2-225ENST00000638041 ECHDC1Q9NTX5 307 aa8.58□□□□□ -1.04
MECP2-225ENST00000638041 AATFQ9NY61 560 aaKnown RBP eCLIP8.58□□□□□ -1.04
MECP2-225ENST00000638041 SWAP70Q9UH65 585 aa8.58□□□□□ -1.04
MECP2-225ENST00000638041 MYH2Q9UKX2 1941 aa8.58□□□□□ -1.04
MECP2-225ENST00000638041 COL2A1P02458 1487 aaPredicted RBP8.57□□□□□ -1.04
MECP2-225ENST00000638041 TTC41PQ6P2S7 1318 aa8.57□□□□□ -1.04
MECP2-225ENST00000638041 USP17L5A8MUK1 530 aa8.57□□□□□ -1.04
MECP2-225ENST00000638041 C19orf81C9J6K1 198 aa8.57□□□□□ -1.04
MECP2-225ENST00000638041 GLRX3O76003 335 aaKnown RBP8.57□□□□□ -1.04
MECP2-225ENST00000638041 ATP5JP18859 108 aa8.57□□□□□ -1.04
MECP2-225ENST00000638041 ZAP70P43403 619 aa8.57□□□□□ -1.04
MECP2-225ENST00000638041 CACNB3P54284 484 aa8.57□□□□□ -1.04
MECP2-225ENST00000638041 USP14P54578 494 aa8.57□□□□□ -1.04
MECP2-225ENST00000638041 MIGA2Q7L4E1 593 aa8.57□□□□□ -1.04
MECP2-225ENST00000638041 SMCR8Q8TEV9 937 aaPredicted RBP8.57□□□□□ -1.04
MECP2-225ENST00000638041 TGFBRAP1Q8WUH2 860 aa8.57□□□□□ -1.04
MECP2-225ENST00000638041 EAF2Q96CJ1 260 aaPredicted RBP8.57□□□□□ -1.04
MECP2-225ENST00000638041 IL1RAPL2Q9NP60 686 aa8.57□□□□□ -1.04
MECP2-225ENST00000638041 SNRKQ9NRH2 765 aa8.57□□□□□ -1.04
MECP2-225ENST00000638041 ATP8A2Q9NTI2 1148 aa8.57□□□□□ -1.04
MECP2-225ENST00000638041 PAG1Q9NWQ8 432 aa8.57□□□□□ -1.04
MECP2-225ENST00000638041 DBNLQ9UJU6 430 aaKnown RBP8.57□□□□□ -1.04
MECP2-225ENST00000638041 SCAF8Q9UPN6 1271 aaKnown RBP8.57□□□□□ -1.04
MECP2-225ENST00000638041 SLC45A1Q9Y2W3 748 aa8.57□□□□□ -1.04
MECP2-225ENST00000638041 CEP350Q5VT06 3117 aa8.56□□□□□ -1.04
MECP2-225ENST00000638041 TESPA1A2RU30 521 aaPredicted RBP8.56□□□□□ -1.04
MECP2-225ENST00000638041 GOLIM4O00461 696 aa8.56□□□□□ -1.04
MECP2-225ENST00000638041 CYP2E1P05181 493 aaPredicted RBP8.56□□□□□ -1.04
MECP2-225ENST00000638041 TBC1D9Q6ZT07 1266 aa8.56□□□□□ -1.04
MECP2-225ENST00000638041 MOB2Q70IA6 237 aa8.56□□□□□ -1.04
MECP2-225ENST00000638041 ANKRD23Q86SG2 305 aa8.56□□□□□ -1.04
MECP2-225ENST00000638041 PROCA1Q8NCQ7 364 aaPredicted RBP8.56□□□□□ -1.04
MECP2-225ENST00000638041 TEPSINQ96N21 525 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms