RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 METAP2P50579 478 aaKnown RBP eCLIP7.38□□□□□ -1.23
CACNA1D-227ENST00000637844 PPP4CP60510 307 aa7.38□□□□□ -1.23
CACNA1D-227ENST00000637844 GTF2IP78347 998 aa7.38□□□□□ -1.23
CACNA1D-227ENST00000637844 CCT2P78371 535 aaKnown RBP7.38□□□□□ -1.23
CACNA1D-227ENST00000637844 SCRN1Q12765 414 aa7.38□□□□□ -1.23
CACNA1D-227ENST00000637844 PKP1Q13835 747 aa7.38□□□□□ -1.23
CACNA1D-227ENST00000637844 WTAPQ15007 396 aa7.38□□□□□ -1.23
CACNA1D-227ENST00000637844 SBK1Q52WX2 424 aa7.38□□□□□ -1.23
CACNA1D-227ENST00000637844 PODNQ7Z5L7 613 aa7.38□□□□□ -1.23
CACNA1D-227ENST00000637844 DEFB132Q7Z7B7 95 aa7.38□□□□□ -1.23
CACNA1D-227ENST00000637844 IQCA1Q86XH1 822 aa7.38□□□□□ -1.23
CACNA1D-227ENST00000637844 SMARCC2Q8TAQ2 1214 aa7.38□□□□□ -1.23
CACNA1D-227ENST00000637844 NBPF3Q9H094 633 aa7.38□□□□□ -1.23
CACNA1D-227ENST00000637844 ZDHHC9Q9Y397 364 aa7.38□□□□□ -1.23
CACNA1D-227ENST00000637844 SLC12A7Q9Y666 1083 aa7.38□□□□□ -1.23
CACNA1D-227ENST00000637844 DDX49Q9Y6V7 483 aaKnown RBP7.38□□□□□ -1.23
CACNA1D-227ENST00000637844 C10orf71Q711Q0 1435 aa7.37□□□□□ -1.23
CACNA1D-227ENST00000637844 BAZ2AQ9UIF9 1905 aaKnown RBP7.37□□□□□ -1.23
CACNA1D-227ENST00000637844 CCDC196A0A1B0GTZ2 297 aa7.37□□□□□ -1.23
CACNA1D-227ENST00000637844 ANTXR2P58335 489 aa7.37□□□□□ -1.23
CACNA1D-227ENST00000637844 KRT85P78386 507 aa7.37□□□□□ -1.23
CACNA1D-227ENST00000637844 ST3GAL1Q11201 340 aa7.37□□□□□ -1.23
CACNA1D-227ENST00000637844 CCDC178Q5BJE1 867 aa7.37□□□□□ -1.23
CACNA1D-227ENST00000637844 SOGA3Q5TF21 947 aa7.37□□□□□ -1.23
CACNA1D-227ENST00000637844 CYB5R4Q7L1T6 521 aa7.37□□□□□ -1.23
CACNA1D-227ENST00000637844 TEX11Q8IYF3 940 aa7.37□□□□□ -1.23
CACNA1D-227ENST00000637844 NSUN7Q8NE18 718 aaKnown RBP7.37□□□□□ -1.23
CACNA1D-227ENST00000637844 WASF1Q92558 559 aa7.37□□□□□ -1.23
CACNA1D-227ENST00000637844 SYAP1Q96A49 352 aaPredicted RBP7.37□□□□□ -1.23
CACNA1D-227ENST00000637844 ZSCAN16Q9H4T2 348 aaPredicted RBP7.37□□□□□ -1.23
CACNA1D-227ENST00000637844 DCP1AQ9NPI6 582 aaPredicted RBP7.37□□□□□ -1.23
CACNA1D-227ENST00000637844 MCM9Q9NXL9 1143 aa7.37□□□□□ -1.23
CACNA1D-227ENST00000637844 ZSWIM5Q9P217 1185 aa7.37□□□□□ -1.23
CACNA1D-227ENST00000637844 MTMR6Q9Y217 621 aa7.37□□□□□ -1.23
CACNA1D-227ENST00000637844 FOCADQ5VW36 1801 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 KIF13BQ9NQT8 1826 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 GPR75-ASB3A0A0A6YYF3 556 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 GOLGA8AA7E2F4 631 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 USP17L12C9JPN9 530 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 USP17L21D6R901 530 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 ORC4O43929 436 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 RANBP6O60518 1105 aaKnown RBP7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 JAK2O60674 1132 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 PRPF40AO75400 957 aaKnown RBP7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 POLR3DP05423 398 aaPredicted RBP7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 CALM1P0DP23 149 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 CALM2P0DP24 149 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 CALM3P0DP25 149 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 CHRNA5P30532 468 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 BTDP43251 543 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 RCAN1P53805 252 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 COL9A3Q14050 684 aaPredicted RBP7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 TRIM29Q14134 588 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 PPP2R5BQ15173 497 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 DIXDC1Q155Q3 683 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 DOK7Q18PE1 504 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 KLHL40Q2TBA0 621 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 CCDC93Q567U6 631 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 CTR9Q6PD62 1173 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 SGMS1Q86VZ5 419 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 TRIM22Q8IYM9 498 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 RTKN2Q8IZC4 609 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 STK11IPQ8N1F8 1099 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 TTLL6Q8N841 843 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 RGS22Q8NE09 1264 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 SH3RF3Q8TEJ3 882 aaPredicted RBP7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 ZNF384Q8TF68 577 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 DDX11Q96FC9 970 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 FAM163AQ96GL9 167 aaPredicted RBP7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 RTFDC1Q9BY42 306 aaPredicted RBP7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 LY9Q9HBG7 655 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 MKNK2Q9HBH9 465 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 ZNF219Q9P2Y4 722 aaPredicted RBP7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 BRPF3Q9ULD4 1205 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 SLX4Q8IY92 1834 aa7.36□□□□□ -1.23
CACNA1D-227ENST00000637844 MYH15Q9Y2K3 1946 aa7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 GAKO14976 1311 aa7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 TNKSO95271 1327 aa7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 CDK5RAP2Q96SN8 1893 aa7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 TSPY2A6NKD2 308 aa7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 ECE2O60344 883 aa7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 IARSP41252 1262 aaKnown RBP7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 TGFB2P61812 414 aa7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 FKBP1AP62942 108 aaKnown RBP7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 RTN1Q16799 776 aa7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 FOXD4L6Q3SYB3 417 aaPredicted RBP7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 IFIT1BQ5T764 474 aaKnown RBP7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 STRIP1Q5VSL9 837 aa7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 APOA5Q6Q788 366 aa7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 FOXD4L3Q6VB84 417 aaPredicted RBP7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 CATIPQ7Z7H3 387 aa7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 MICU3Q86XE3 530 aa7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 ZNF444Q8N0Y2 327 aaPredicted RBP7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 IGDCC4Q8TDY8 1250 aa7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 TGFBRAP1Q8WUH2 860 aa7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 TEKT1Q969V4 418 aa7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 C8orf76Q96K31 380 aa7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 ZNF396Q96N95 335 aaPredicted RBP7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 ZSCAN10Q96SZ4 725 aaPredicted RBP7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 VPS33BQ9H267 617 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms