RNA–Protein interactions for RNA: ENST00000637649.1

CHRNA7-230, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-230ENST00000637649 PAK6Q9NQU5 681 aaPredicted RBP16.32■□□□□ 0.2
CHRNA7-230ENST00000637649 PICK1Q9NRD5 415 aa16.32■□□□□ 0.2
CHRNA7-230ENST00000637649 FAM198AQ9UFP1 575 aa16.32■□□□□ 0.2
CHRNA7-230ENST00000637649 SUGT1Q9Y2Z0 365 aa16.32■□□□□ 0.2
CHRNA7-230ENST00000637649 A0A0G2JLL6 359 aaPredicted RBP16.31■□□□□ 0.2
CHRNA7-230ENST00000637649 PRRT2Q7Z6L0 340 aaPredicted RBP16.31■□□□□ 0.2
CHRNA7-230ENST00000637649 CRISPLD2Q9H0B8 497 aa16.31■□□□□ 0.2
CHRNA7-230ENST00000637649 USP40Q9NVE5 1235 aa16.31■□□□□ 0.2
CHRNA7-230ENST00000637649 DNAH12Q6ZR08 3092 aa16.31■□□□□ 0.2
CHRNA7-230ENST00000637649 PTPRFP10586 1907 aa16.31■□□□□ 0.2
CHRNA7-230ENST00000637649 IFIT1P09914 478 aaKnown RBP16.3■□□□□ 0.2
CHRNA7-230ENST00000637649 SLURP2P0DP57 97 aa16.3■□□□□ 0.2
CHRNA7-230ENST00000637649 IRF5Q13568 498 aa16.3■□□□□ 0.2
CHRNA7-230ENST00000637649 SCYL3Q8IZE3 742 aa16.3■□□□□ 0.2
CHRNA7-230ENST00000637649 ANKRD13CQ8N6S4 541 aa16.3■□□□□ 0.2
CHRNA7-230ENST00000637649 ANKRD44Q8N8A2 993 aa16.3■□□□□ 0.2
CHRNA7-230ENST00000637649 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.3■□□□□ 0.2
CHRNA7-230ENST00000637649 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.3■□□□□ 0.2
CHRNA7-230ENST00000637649 TTC28Q96AY4 2481 aa16.29■□□□□ 0.2
CHRNA7-230ENST00000637649 TRIM75PA6NK02 468 aa16.29■□□□□ 0.2
CHRNA7-230ENST00000637649 PHF20L1A8MW92 1017 aa16.29■□□□□ 0.2
CHRNA7-230ENST00000637649 PTPRAP18433 802 aa16.29■□□□□ 0.2
CHRNA7-230ENST00000637649 MAGEA10P43363 369 aaPredicted RBP16.29■□□□□ 0.2
CHRNA7-230ENST00000637649 PUM3Q15397 648 aaKnown RBP16.29■□□□□ 0.2
CHRNA7-230ENST00000637649 CCDC84Q86UT8 332 aaPredicted RBP16.29■□□□□ 0.2
CHRNA7-230ENST00000637649 WDR66Q8TBY9 1149 aa16.29■□□□□ 0.2
CHRNA7-230ENST00000637649 COA7Q96BR5 231 aa16.29■□□□□ 0.2
CHRNA7-230ENST00000637649 AFG3L2Q9Y4W6 797 aa16.29■□□□□ 0.2
CHRNA7-230ENST00000637649 PRUNE2Q8WUY3 3088 aa16.29■□□□□ 0.2
CHRNA7-230ENST00000637649 DOCK2Q92608 1830 aa16.29■□□□□ 0.2
CHRNA7-230ENST00000637649 PRDX5P30044 214 aa16.28■□□□□ 0.2
CHRNA7-230ENST00000637649 BMP8BP34820 402 aa16.28■□□□□ 0.2
CHRNA7-230ENST00000637649 ZSCAN29Q8IWY8 852 aaPredicted RBP16.28■□□□□ 0.2
CHRNA7-230ENST00000637649 STXBP5LQ9Y2K9 1186 aa16.28■□□□□ 0.2
CHRNA7-230ENST00000637649 EYSQ5T1H1 3165 aa16.28■□□□□ 0.2
CHRNA7-230ENST00000637649 SLC5A1P13866 664 aa16.27■□□□□ 0.2
CHRNA7-230ENST00000637649 FGFR2P21802 821 aa16.27■□□□□ 0.2
CHRNA7-230ENST00000637649 RGS3P49796 1198 aa16.27■□□□□ 0.2
CHRNA7-230ENST00000637649 TRIM32Q13049 653 aa16.27■□□□□ 0.2
CHRNA7-230ENST00000637649 RABL6Q3YEC7 729 aaPredicted RBP16.27■□□□□ 0.2
CHRNA7-230ENST00000637649 MTMR10Q9NXD2 777 aa16.27■□□□□ 0.2
CHRNA7-230ENST00000637649 LRRFIP2Q9Y608 721 aaKnown RBP16.27■□□□□ 0.2
CHRNA7-230ENST00000637649 MYH2Q9UKX2 1941 aa16.27■□□□□ 0.19
CHRNA7-230ENST00000637649 LDHBP07195 334 aaKnown RBP16.26■□□□□ 0.19
CHRNA7-230ENST00000637649 TREML2Q5T2D2 321 aa16.26■□□□□ 0.19
CHRNA7-230ENST00000637649 GPR153Q6NV75 609 aa16.26■□□□□ 0.19
CHRNA7-230ENST00000637649 TDHQ8IZJ6 230 aa16.26■□□□□ 0.19
CHRNA7-230ENST00000637649 COL25A1Q9BXS0 654 aaPredicted RBP16.26■□□□□ 0.19
CHRNA7-230ENST00000637649 UBE2OQ9C0C9 1292 aaKnown RBP16.26■□□□□ 0.19
CHRNA7-230ENST00000637649 NBPF3Q9H094 633 aa16.26■□□□□ 0.19
CHRNA7-230ENST00000637649 SLC45A1Q9Y2W3 748 aa16.26■□□□□ 0.19
CHRNA7-230ENST00000637649 PHIPQ8WWQ0 1821 aa16.26■□□□□ 0.19
CHRNA7-230ENST00000637649 ATRNL1Q5VV63 1379 aa16.26■□□□□ 0.19
CHRNA7-230ENST00000637649 DDX60LQ5H9U9 1706 aaKnown RBP16.25■□□□□ 0.19
CHRNA7-230ENST00000637649 HMGCRP04035 888 aa16.25■□□□□ 0.19
CHRNA7-230ENST00000637649 CAPN2P17655 700 aa16.25■□□□□ 0.19
CHRNA7-230ENST00000637649 LRIT3Q3SXY7 679 aa16.25■□□□□ 0.19
CHRNA7-230ENST00000637649 SH3BP5LQ7L8J4 393 aa16.25■□□□□ 0.19
CHRNA7-230ENST00000637649 C11orf49Q9H6J7 331 aa16.25■□□□□ 0.19
CHRNA7-230ENST00000637649 DOCK1Q14185 1865 aa16.25■□□□□ 0.19
CHRNA7-230ENST00000637649 UTYO14607 1347 aa16.24■□□□□ 0.19
CHRNA7-230ENST00000637649 KIF16BQ96L93 1317 aa16.24■□□□□ 0.19
CHRNA7-230ENST00000637649 WDR63Q8IWG1 891 aa16.24■□□□□ 0.19
CHRNA7-230ENST00000637649 AGTPBP1Q9UPW5 1226 aa16.24■□□□□ 0.19
CHRNA7-230ENST00000637649 DDTLA6NHG4 134 aaPredicted RBP16.23■□□□□ 0.19
CHRNA7-230ENST00000637649 PICALMQ13492 652 aa16.23■□□□□ 0.19
CHRNA7-230ENST00000637649 FAM110CQ1W6H9 321 aa16.23■□□□□ 0.19
CHRNA7-230ENST00000637649 ANKLE1Q8NAG6 615 aa16.23■□□□□ 0.19
CHRNA7-230ENST00000637649 LPIN2Q92539 896 aa16.23■□□□□ 0.19
CHRNA7-230ENST00000637649 HMX1Q9NP08 348 aaPredicted RBP16.23■□□□□ 0.19
CHRNA7-230ENST00000637649 RPTORQ8N122 1335 aa16.22■□□□□ 0.19
CHRNA7-230ENST00000637649 EYA2O00167 538 aa16.22■□□□□ 0.19
CHRNA7-230ENST00000637649 CTNND1O60716 968 aaKnown RBP16.22■□□□□ 0.19
CHRNA7-230ENST00000637649 PNMA3Q9UL41 463 aa16.22■□□□□ 0.19
CHRNA7-230ENST00000637649 FAM196BA6NMK8 535 aa16.21■□□□□ 0.19
CHRNA7-230ENST00000637649 ENTPD3O75355 529 aa16.21■□□□□ 0.19
CHRNA7-230ENST00000637649 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.21■□□□□ 0.19
CHRNA7-230ENST00000637649 FAM161BQ96MY7 647 aa16.21■□□□□ 0.19
CHRNA7-230ENST00000637649 SIL1Q9H173 461 aa16.21■□□□□ 0.19
CHRNA7-230ENST00000637649 DDX4Q9NQI0 724 aaKnown RBP16.21■□□□□ 0.19
CHRNA7-230ENST00000637649 GNL3LQ9NVN8 582 aaKnown RBP16.21■□□□□ 0.19
CHRNA7-230ENST00000637649 CYP2B6P20813 491 aa16.2■□□□□ 0.18
CHRNA7-230ENST00000637649 PHKA1P46020 1223 aa16.2■□□□□ 0.18
CHRNA7-230ENST00000637649 MDM2Q00987 491 aaPredicted RBP16.2■□□□□ 0.18
CHRNA7-230ENST00000637649 SPP2Q13103 211 aa16.2■□□□□ 0.18
CHRNA7-230ENST00000637649 ATP2B3Q16720 1220 aa16.2■□□□□ 0.18
CHRNA7-230ENST00000637649 IDI2Q9BXS1 227 aa16.2■□□□□ 0.18
CHRNA7-230ENST00000637649 GJD2Q9UKL4 321 aa16.2■□□□□ 0.18
CHRNA7-230ENST00000637649 PFASO15067 1338 aa16.19■□□□□ 0.18
CHRNA7-230ENST00000637649 SPTBN5Q9NRC6 3674 aaKnown RBP16.19■□□□□ 0.18
CHRNA7-230ENST00000637649 PEX10O60683 326 aa16.19■□□□□ 0.18
CHRNA7-230ENST00000637649 RFX5P48382 616 aaPredicted RBP16.19■□□□□ 0.18
CHRNA7-230ENST00000637649 HMGCS2P54868 508 aa16.19■□□□□ 0.18
CHRNA7-230ENST00000637649 ATG9AQ7Z3C6 839 aa16.19■□□□□ 0.18
CHRNA7-230ENST00000637649 DZIP1Q86YF9 867 aaKnown RBP16.19■□□□□ 0.18
CHRNA7-230ENST00000637649 TRIB2Q92519 343 aa16.19■□□□□ 0.18
CHRNA7-230ENST00000637649 OGDHLQ9ULD0 1010 aa16.19■□□□□ 0.18
CHRNA7-230ENST00000637649 PLXNB2O15031 1838 aa16.18■□□□□ 0.18
CHRNA7-230ENST00000637649 PRKAR2AP13861 404 aaKnown RBP16.18■□□□□ 0.18
CHRNA7-230ENST00000637649 BTDP43251 543 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms