RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 A6NJR5 290 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 POM121CA8CG34 1229 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 KIF20AO95235 890 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 HSPA4P34932 840 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 RABL6Q3YEC7 729 aaPredicted RBP6.37□□□□□ -1.39
CHD2-227ENST00000637572 LRRC24Q50LG9 513 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 MFSD14BQ5SR56 506 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 ATP8A2Q9NTI2 1148 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 CAVIN2O95810 425 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 RPS6KB1P23443 525 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 GNA11P29992 359 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 CLCN1P35523 988 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 PICALMQ13492 652 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 CAMK2BQ13554 666 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 KANK3Q6NY19 840 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 OTUD7AQ8TE49 926 aaPredicted RBP6.37□□□□□ -1.39
CHD2-227ENST00000637572 BRIP1Q9BX63 1249 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 COA1Q9GZY4 146 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 TSPY26PQ9H489 355 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 R3HCC1Q9Y3T6 440 aaKnown RBP6.37□□□□□ -1.39
CHD2-227ENST00000637572 XRN1Q8IZH2 1706 aaKnown RBP6.37□□□□□ -1.39
CHD2-227ENST00000637572 NBPF26B4DH59 902 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 H7C1D1 291 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 SLC27A2O14975 620 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 GPR37O15354 613 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 CCT2P78371 535 aaKnown RBP6.37□□□□□ -1.39
CHD2-227ENST00000637572 DLGAP5Q15398 846 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 NBPF10Q6P3W6 841 aaKnown RBP6.37□□□□□ -1.39
CHD2-227ENST00000637572 SKAP1Q86WV1 359 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 NBPF15Q8N660 670 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 GTPBP4Q9BZE4 634 aaKnown RBP6.37□□□□□ -1.39
CHD2-227ENST00000637572 NUP62CLQ9H1M0 184 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 VEZTQ9HBM0 779 aa6.37□□□□□ -1.39
CHD2-227ENST00000637572 DDX19AQ9NUU7 478 aaKnown RBP6.37□□□□□ -1.39
CHD2-227ENST00000637572 DBNLQ9UJU6 430 aaKnown RBP6.37□□□□□ -1.39
CHD2-227ENST00000637572 ANGEL1Q9UNK9 670 aaKnown RBP6.37□□□□□ -1.39
CHD2-227ENST00000637572 ADCY9O60503 1353 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 MEGF6O75095 1541 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 MMP10P09238 476 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 CD44P16070 742 aaKnown RBP6.36□□□□□ -1.39
CHD2-227ENST00000637572 PDE6AP16499 860 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 AMHR2Q16671 573 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 CAVIN1Q6NZI2 390 aaKnown RBP6.36□□□□□ -1.39
CHD2-227ENST00000637572 SLC26A6Q9BXS9 759 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 MTFR1LQ9H019 292 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 ARHGEF10LQ9HCE6 1279 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 C6orf50Q9HD87 102 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 MAGEC2Q9UBF1 373 aaPredicted RBP6.36□□□□□ -1.39
CHD2-227ENST00000637572 HLFQ16534 295 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 WWC2Q6AWC2 1192 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 BRAPQ7Z569 592 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 ZNF34Q8IZ26 560 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 KCNG4Q8TDN1 519 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 RRP36Q96EU6 259 aaKnown RBP6.36□□□□□ -1.39
CHD2-227ENST00000637572 CEP89Q96ST8 783 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 ZNF408Q9H9D4 720 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 TCP11L1Q9NUJ3 509 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 MYO3BQ8WXR4 1341 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.36□□□□□ -1.39
CHD2-227ENST00000637572 ZSCAN22P10073 491 aaPredicted RBP6.36□□□□□ -1.39
CHD2-227ENST00000637572 SF3B3Q15393 1217 aaKnown RBP6.36□□□□□ -1.39
CHD2-227ENST00000637572 TTLL5Q6EMB2 1281 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 TTLL6Q8N841 843 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 GLMNQ92990 594 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 ALG1Q9BT22 464 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 ARMT1Q9H993 441 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 UTYO14607 1347 aa6.36□□□□□ -1.39
CHD2-227ENST00000637572 NWD1Q149M9 1564 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 SMTNL1A8MU46 457 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 GTF2IP78347 998 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 AMPD3Q01432 767 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 CEBPZQ03701 1054 aaKnown RBP6.35□□□□□ -1.39
CHD2-227ENST00000637572 SRP68Q9UHB9 627 aaKnown RBP6.35□□□□□ -1.39
CHD2-227ENST00000637572 LTBP4Q8N2S1 1624 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 SLIT3O75094 1523 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 EPS15P42566 896 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 ZMYM1Q5SVZ6 1142 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 AKNAD1Q5T1N1 836 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 MCTP2Q6DN12 878 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 CRAMP1Q96RY5 1269 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 GPCPD1Q9NPB8 672 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 TTF2Q9UNY4 1162 aaKnown RBP6.35□□□□□ -1.39
CHD2-227ENST00000637572 MYOM1P52179 1685 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 MAP2P11137 1827 aaKnown RBP6.35□□□□□ -1.39
CHD2-227ENST00000637572 KDM4AO75164 1064 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 HSPA6P17066 643 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 BCAMP50895 628 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 AK2P54819 239 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 MAP3K11Q16584 847 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 DCAF15Q66K64 600 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 FAM227BQ96M60 508 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 CBFA2T2O43439 604 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 ONECUT3O60422 494 aaPredicted RBP6.35□□□□□ -1.39
CHD2-227ENST00000637572 CAMTA2O94983 1202 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 PARP1P09874 1014 aaKnown RBP6.35□□□□□ -1.39
CHD2-227ENST00000637572 GYG1P46976 350 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 CLK2P49760 499 aaKnown RBP6.35□□□□□ -1.39
CHD2-227ENST00000637572 DALRD3Q5D0E6 543 aaKnown RBP6.35□□□□□ -1.39
CHD2-227ENST00000637572 CCDC17Q96LX7 622 aa6.35□□□□□ -1.39
CHD2-227ENST00000637572 AATFQ9NY61 560 aaKnown RBP eCLIP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms