RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 GTF2A2P52657 109 aa16.87■□□□□ 0.29
PNKP-228ENST00000637325 ERO1BQ86YB8 467 aa16.87■□□□□ 0.29
PNKP-228ENST00000637325 SIRT2Q8IXJ6 389 aa16.87■□□□□ 0.29
PNKP-228ENST00000637325 ZNF384Q8TF68 577 aa16.87■□□□□ 0.29
PNKP-228ENST00000637325 CNKSR2Q8WXI2 1034 aa16.87■□□□□ 0.29
PNKP-228ENST00000637325 MCOLN1Q9GZU1 580 aa16.87■□□□□ 0.29
PNKP-228ENST00000637325 SPDYE5A6NIY4 337 aa16.86■□□□□ 0.29
PNKP-228ENST00000637325 GPR25O00155 361 aa16.86■□□□□ 0.29
PNKP-228ENST00000637325 WDHD1O75717 1129 aaPredicted RBP16.86■□□□□ 0.29
PNKP-228ENST00000637325 BAG3O95817 575 aa16.86■□□□□ 0.29
PNKP-228ENST00000637325 SNCAIPQ9Y6H5 919 aa16.86■□□□□ 0.29
PNKP-228ENST00000637325 CCL15-CCL14A0A0B4J2E2 113 aa16.85■□□□□ 0.29
PNKP-228ENST00000637325 IGF2BP3O00425 579 aaKnown RBP eCLIP16.85■□□□□ 0.29
PNKP-228ENST00000637325 IFIT2P09913 472 aaKnown RBP16.85■□□□□ 0.29
PNKP-228ENST00000637325 INPP5BP32019 993 aa16.85■□□□□ 0.29
PNKP-228ENST00000637325 RHBDL3P58872 404 aa16.85■□□□□ 0.29
PNKP-228ENST00000637325 CCL15Q16663 113 aa16.85■□□□□ 0.29
PNKP-228ENST00000637325 TEX11Q8IYF3 940 aa16.85■□□□□ 0.29
PNKP-228ENST00000637325 ZNF296Q8WUU4 475 aaPredicted RBP16.85■□□□□ 0.29
PNKP-228ENST00000637325 DDX4Q9NQI0 724 aaKnown RBP16.85■□□□□ 0.29
PNKP-228ENST00000637325 PIH1D3Q9NQM4 214 aaKnown RBP16.85■□□□□ 0.29
PNKP-228ENST00000637325 TESPA1A2RU30 521 aaPredicted RBP16.84■□□□□ 0.29
PNKP-228ENST00000637325 IGSF3O75054 1194 aa16.84■□□□□ 0.29
PNKP-228ENST00000637325 FKTNO75072 461 aa16.84■□□□□ 0.29
PNKP-228ENST00000637325 PLCG2P16885 1265 aa16.84■□□□□ 0.29
PNKP-228ENST00000637325 NOM1Q5C9Z4 860 aaKnown RBP16.84■□□□□ 0.29
PNKP-228ENST00000637325 CTU1Q7Z7A3 348 aaKnown RBP16.84■□□□□ 0.29
PNKP-228ENST00000637325 MS4A4AQ96JQ5 239 aa16.84■□□□□ 0.29
PNKP-228ENST00000637325 CFHR5Q9BXR6 569 aa16.84■□□□□ 0.29
PNKP-228ENST00000637325 AATFQ9NY61 560 aaKnown RBP eCLIP16.84■□□□□ 0.29
PNKP-228ENST00000637325 ZNF112Q9UJU3 913 aa16.84■□□□□ 0.29
PNKP-228ENST00000637325 RFX7Q2KHR2 1363 aa16.84■□□□□ 0.29
PNKP-228ENST00000637325 FOCADQ5VW36 1801 aa16.84■□□□□ 0.29
PNKP-228ENST00000637325 MYH1P12882 1939 aa16.84■□□□□ 0.29
PNKP-228ENST00000637325 DDTLA6NHG4 134 aaPredicted RBP16.83■□□□□ 0.28
PNKP-228ENST00000637325 CCDC85CA6NKD9 419 aa16.83■□□□□ 0.28
PNKP-228ENST00000637325 NPM3O75607 178 aaKnown RBP16.83■□□□□ 0.28
PNKP-228ENST00000637325 IDH1O75874 414 aaKnown RBP16.83■□□□□ 0.28
PNKP-228ENST00000637325 CETPP11597 493 aa16.83■□□□□ 0.28
PNKP-228ENST00000637325 PPATQ06203 517 aa16.83■□□□□ 0.28
PNKP-228ENST00000637325 PPIL2Q13356 520 aa16.83■□□□□ 0.28
PNKP-228ENST00000637325 SNAPC2Q13487 334 aa16.83■□□□□ 0.28
PNKP-228ENST00000637325 SH3BP5LQ7L8J4 393 aa16.83■□□□□ 0.28
PNKP-228ENST00000637325 SH3RF3Q8TEJ3 882 aaPredicted RBP16.83■□□□□ 0.28
PNKP-228ENST00000637325 BRI3BPQ8WY22 251 aa16.83■□□□□ 0.28
PNKP-228ENST00000637325 R3HDMLQ9H3Y0 253 aa16.83■□□□□ 0.28
PNKP-228ENST00000637325 DOCK1Q14185 1865 aa16.82■□□□□ 0.28
PNKP-228ENST00000637325 IRF6O14896 467 aa16.82■□□□□ 0.28
PNKP-228ENST00000637325 CYP7A1P22680 504 aa16.82■□□□□ 0.28
PNKP-228ENST00000637325 MAP3K12Q12852 859 aa16.82■□□□□ 0.28
PNKP-228ENST00000637325 PTPN18Q99952 460 aa16.82■□□□□ 0.28
PNKP-228ENST00000637325 NDUFB9Q9Y6M9 179 aa16.82■□□□□ 0.28
PNKP-228ENST00000637325 ATAD5Q96QE3 1844 aa16.82■□□□□ 0.28
PNKP-228ENST00000637325 PPP4CP60510 307 aa16.81■□□□□ 0.28
PNKP-228ENST00000637325 CRHR2Q13324 411 aa16.81■□□□□ 0.28
PNKP-228ENST00000637325 TTF1Q15361 905 aaPredicted RBP16.81■□□□□ 0.28
PNKP-228ENST00000637325 TAF1CQ15572 869 aaPredicted RBP16.81■□□□□ 0.28
PNKP-228ENST00000637325 NOL9Q5SY16 702 aaKnown RBP16.81■□□□□ 0.28
PNKP-228ENST00000637325 MAGEB6Q8N7X4 407 aa16.81■□□□□ 0.28
PNKP-228ENST00000637325 OSBPL5Q9H0X9 879 aaPredicted RBP16.81■□□□□ 0.28
PNKP-228ENST00000637325 PICK1Q9NRD5 415 aa16.81■□□□□ 0.28
PNKP-228ENST00000637325 MYH7P12883 1935 aa16.8■□□□□ 0.28
PNKP-228ENST00000637325 PHF20L1A8MW92 1017 aa16.8■□□□□ 0.28
PNKP-228ENST00000637325 ADGRA1Q86SQ6 560 aa16.8■□□□□ 0.28
PNKP-228ENST00000637325 LRRCC1Q9C099 1032 aa16.8■□□□□ 0.28
PNKP-228ENST00000637325 ANTXR1Q9H6X2 564 aa16.8■□□□□ 0.28
PNKP-228ENST00000637325 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.8■□□□□ 0.28
PNKP-228ENST00000637325 ZFYVE28Q9HCC9 887 aa16.8■□□□□ 0.28
PNKP-228ENST00000637325 ATRNL1Q5VV63 1379 aa16.79■□□□□ 0.28
PNKP-228ENST00000637325 PTPRFP10586 1907 aa16.79■□□□□ 0.28
PNKP-228ENST00000637325 TBC1D12O60347 775 aa16.79■□□□□ 0.28
PNKP-228ENST00000637325 RRP1P56182 461 aaKnown RBP16.79■□□□□ 0.28
PNKP-228ENST00000637325 PKN2Q16513 984 aaKnown RBP16.79■□□□□ 0.28
PNKP-228ENST00000637325 MAPKAPK5Q8IW41 473 aa16.79■□□□□ 0.28
PNKP-228ENST00000637325 SCYL3Q8IZE3 742 aa16.79■□□□□ 0.28
PNKP-228ENST00000637325 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.79■□□□□ 0.28
PNKP-228ENST00000637325 TGFBRAP1Q8WUH2 860 aa16.79■□□□□ 0.28
PNKP-228ENST00000637325 DNAJC2Q99543 621 aaKnown RBP16.79■□□□□ 0.28
PNKP-228ENST00000637325 PHIPQ8WWQ0 1821 aa16.78■□□□□ 0.28
PNKP-228ENST00000637325 CTNND1O60716 968 aaKnown RBP16.78■□□□□ 0.28
PNKP-228ENST00000637325 DYNLL1P63167 89 aaKnown RBP16.78■□□□□ 0.28
PNKP-228ENST00000637325 MAP3K10Q02779 954 aa16.78■□□□□ 0.28
PNKP-228ENST00000637325 TMED8Q6PL24 325 aaPredicted RBP16.78■□□□□ 0.28
PNKP-228ENST00000637325 FAM43AQ8N2R8 423 aa16.78■□□□□ 0.28
PNKP-228ENST00000637325 MIGA1Q8NAN2 632 aa16.78■□□□□ 0.28
PNKP-228ENST00000637325 ERO1AQ96HE7 468 aa16.78■□□□□ 0.28
PNKP-228ENST00000637325 COL2A1P02458 1487 aaPredicted RBP16.78■□□□□ 0.28
PNKP-228ENST00000637325 BTBD19C9JJ37 291 aa16.77■□□□□ 0.28
PNKP-228ENST00000637325 GOLIM4O00461 696 aa16.77■□□□□ 0.28
PNKP-228ENST00000637325 SLURP2P0DP57 97 aa16.77■□□□□ 0.28
PNKP-228ENST00000637325 CERS3Q8IU89 383 aa16.77■□□□□ 0.28
PNKP-228ENST00000637325 TRIM34Q9BYJ4 488 aa16.77■□□□□ 0.28
PNKP-228ENST00000637325 DHX36Q9H2U1 1008 aaKnown RBP16.77■□□□□ 0.28
PNKP-228ENST00000637325 ZCCHC17Q9NP64 241 aaKnown RBP16.77■□□□□ 0.28
PNKP-228ENST00000637325 PI4KBQ9UBF8 816 aa16.77■□□□□ 0.28
PNKP-228ENST00000637325 KCNH4Q9UQ05 1017 aa16.77■□□□□ 0.28
PNKP-228ENST00000637325 ZHX2Q9Y6X8 837 aa16.77■□□□□ 0.28
PNKP-228ENST00000637325 FLT1P17948 1338 aa16.76■□□□□ 0.27
PNKP-228ENST00000637325 FAM196BA6NMK8 535 aa16.76■□□□□ 0.27
PNKP-228ENST00000637325 CXCL11O14625 94 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms