RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 SENP2Q9HC62 589 aa13.45□□□□□ -0.26
CLN6-217ENST00000636964 A0A1B0GUL6 1792 aa13.45□□□□□ -0.26
CLN6-217ENST00000636964 PTPDC1A2A3K4 754 aa13.44□□□□□ -0.26
CLN6-217ENST00000636964 POLRMTO00411 1230 aaKnown RBP13.44□□□□□ -0.26
CLN6-217ENST00000636964 PDCP20941 246 aa13.44□□□□□ -0.26
CLN6-217ENST00000636964 DOCK2Q92608 1830 aa13.44□□□□□ -0.26
CLN6-217ENST00000636964 SPDYE4A6NLX3 237 aa13.44□□□□□ -0.26
CLN6-217ENST00000636964 MINDY4BA8MYZ0 360 aa13.44□□□□□ -0.26
CLN6-217ENST00000636964 RXRAP19793 462 aa13.44□□□□□ -0.26
CLN6-217ENST00000636964 KIAA2012Q0VF49 1180 aa13.44□□□□□ -0.26
CLN6-217ENST00000636964 CHMP4CQ96CF2 233 aa13.44□□□□□ -0.26
CLN6-217ENST00000636964 ZNF274Q96GC6 653 aaPredicted RBP13.44□□□□□ -0.26
CLN6-217ENST00000636964 GTPBP4Q9BZE4 634 aaKnown RBP13.44□□□□□ -0.26
CLN6-217ENST00000636964 GOLGA8BA8MQT2 603 aa13.43□□□□□ -0.26
CLN6-217ENST00000636964 KDM4AO75164 1064 aa13.43□□□□□ -0.26
CLN6-217ENST00000636964 GPSM2P81274 684 aa13.43□□□□□ -0.26
CLN6-217ENST00000636964 MECOMQ03112 1051 aa13.43□□□□□ -0.26
CLN6-217ENST00000636964 ALX1Q15699 326 aa13.43□□□□□ -0.26
CLN6-217ENST00000636964 MSL1Q68DK7 614 aa13.43□□□□□ -0.26
CLN6-217ENST00000636964 NACAP1Q9BZK3 213 aa13.43□□□□□ -0.26
CLN6-217ENST00000636964 ATP6V1DQ9Y5K8 247 aa13.43□□□□□ -0.26
CLN6-217ENST00000636964 H3BQV1 296 aa13.43□□□□□ -0.26
CLN6-217ENST00000636964 GUCY1B3Q02153 619 aa13.43□□□□□ -0.26
CLN6-217ENST00000636964 IFFO2Q5TF58 517 aa13.43□□□□□ -0.26
CLN6-217ENST00000636964 ZKSCAN3Q9BRR0 538 aa13.43□□□□□ -0.26
CLN6-217ENST00000636964 TFIP11Q9UBB9 837 aaKnown RBP13.43□□□□□ -0.26
CLN6-217ENST00000636964 CYP2D7A0A087X1C5 515 aa13.42□□□□□ -0.26
CLN6-217ENST00000636964 CCDC144CPQ8IYA2 1237 aa13.42□□□□□ -0.26
CLN6-217ENST00000636964 ZSWIM5Q9P217 1185 aa13.42□□□□□ -0.26
CLN6-217ENST00000636964 PNPLA7Q6ZV29 1317 aa13.42□□□□□ -0.26
CLN6-217ENST00000636964 SMARCC2Q8TAQ2 1214 aa13.42□□□□□ -0.26
CLN6-217ENST00000636964 NSUN4Q96CB9 384 aaKnown RBP13.42□□□□□ -0.26
CLN6-217ENST00000636964 RIOK1Q9BRS2 568 aaKnown RBP13.42□□□□□ -0.26
CLN6-217ENST00000636964 AATFQ9NY61 560 aaKnown RBP eCLIP13.42□□□□□ -0.26
CLN6-217ENST00000636964 KIF20AO95235 890 aa13.42□□□□□ -0.26
CLN6-217ENST00000636964 GNAT2P19087 354 aa13.42□□□□□ -0.26
CLN6-217ENST00000636964 CRY2Q49AN0 593 aa13.42□□□□□ -0.26
CLN6-217ENST00000636964 RBM17Q96I25 401 aaKnown RBP13.42□□□□□ -0.26
CLN6-217ENST00000636964 MYL10Q9BUA6 226 aa13.42□□□□□ -0.26
CLN6-217ENST00000636964 HPS5Q9UPZ3 1129 aa13.42□□□□□ -0.26
CLN6-217ENST00000636964 PLSCR1O15162 318 aa13.41□□□□□ -0.26
CLN6-217ENST00000636964 UFL1O94874 794 aa13.41□□□□□ -0.26
CLN6-217ENST00000636964 PLCB2Q00722 1185 aa13.41□□□□□ -0.26
CLN6-217ENST00000636964 AKNAD1Q5T1N1 836 aa13.41□□□□□ -0.26
CLN6-217ENST00000636964 MFSD6Q6ZSS7 791 aa13.41□□□□□ -0.26
CLN6-217ENST00000636964 XDHP47989 1333 aa13.41□□□□□ -0.26
CLN6-217ENST00000636964 SLC4A8Q2Y0W8 1093 aa13.41□□□□□ -0.26
CLN6-217ENST00000636964 PIBF1Q8WXW3 757 aa13.41□□□□□ -0.26
CLN6-217ENST00000636964 ANGEL1Q9UNK9 670 aaKnown RBP13.41□□□□□ -0.26
CLN6-217ENST00000636964 SEMA3EO15041 775 aa13.41□□□□□ -0.26
CLN6-217ENST00000636964 HMGN5P82970 282 aaKnown RBP13.41□□□□□ -0.26
CLN6-217ENST00000636964 GRIK5Q16478 980 aa13.41□□□□□ -0.26
CLN6-217ENST00000636964 NFXL1Q6ZNB6 911 aa13.41□□□□□ -0.26
CLN6-217ENST00000636964 AKT1S1Q96B36 256 aa13.41□□□□□ -0.26
CLN6-217ENST00000636964 LLPHQ9BRT6 129 aaKnown RBP13.41□□□□□ -0.26
CLN6-217ENST00000636964 TTC12Q9H892 705 aaPredicted RBP13.41□□□□□ -0.26
CLN6-217ENST00000636964 LEMD3Q9Y2U8 911 aa13.41□□□□□ -0.26
CLN6-217ENST00000636964 IRS2Q9Y4H2 1338 aa13.41□□□□□ -0.26
CLN6-217ENST00000636964 EVCP57679 992 aa13.4□□□□□ -0.26
CLN6-217ENST00000636964 EVX2Q03828 476 aa13.4□□□□□ -0.26
CLN6-217ENST00000636964 NOLC1Q14978 699 aaKnown RBP eCLIP13.4□□□□□ -0.26
CLN6-217ENST00000636964 TMEM67Q5HYA8 995 aa13.4□□□□□ -0.26
CLN6-217ENST00000636964 OTUD7BQ6GQQ9 843 aa13.4□□□□□ -0.26
CLN6-217ENST00000636964 OLFM4Q6UX06 510 aa13.4□□□□□ -0.26
CLN6-217ENST00000636964 FDPSP14324 419 aaKnown RBP13.4□□□□□ -0.26
CLN6-217ENST00000636964 ADD1P35611 737 aaKnown RBP13.4□□□□□ -0.26
CLN6-217ENST00000636964 PPARAQ07869 468 aa13.4□□□□□ -0.26
CLN6-217ENST00000636964 MICU3Q86XE3 530 aa13.4□□□□□ -0.26
CLN6-217ENST00000636964 FBXL16Q8N461 479 aa13.4□□□□□ -0.26
CLN6-217ENST00000636964 UTRNP46939 3433 aa13.4□□□□□ -0.26
CLN6-217ENST00000636964 SH2B2O14492 632 aaPredicted RBP13.39□□□□□ -0.27
CLN6-217ENST00000636964 CPLX1O14810 134 aa13.39□□□□□ -0.27
CLN6-217ENST00000636964 IFIT3O14879 490 aaKnown RBP13.39□□□□□ -0.27
CLN6-217ENST00000636964 MBD3O95983 291 aa13.39□□□□□ -0.27
CLN6-217ENST00000636964 IGDCC4Q8TDY8 1250 aa13.39□□□□□ -0.27
CLN6-217ENST00000636964 PRIMPOLQ96LW4 560 aa13.39□□□□□ -0.27
CLN6-217ENST00000636964 GJB4Q9NTQ9 266 aa13.39□□□□□ -0.27
CLN6-217ENST00000636964 CACNA1SQ13698 1873 aa13.39□□□□□ -0.27
CLN6-217ENST00000636964 LETM1O95202 739 aaPredicted RBP13.39□□□□□ -0.27
CLN6-217ENST00000636964 U2AF2P26368 475 aaKnown RBP eCLIP13.39□□□□□ -0.27
CLN6-217ENST00000636964 DZIP1Q86YF9 867 aaKnown RBP13.39□□□□□ -0.27
CLN6-217ENST00000636964 C6orf229H3BNL8 230 aa13.39□□□□□ -0.27
CLN6-217ENST00000636964 PRDM1O75626 825 aa13.39□□□□□ -0.27
CLN6-217ENST00000636964 MMP10P09238 476 aa13.39□□□□□ -0.27
CLN6-217ENST00000636964 CEBPZQ03701 1054 aaKnown RBP13.39□□□□□ -0.27
CLN6-217ENST00000636964 NLGN1Q8N2Q7 840 aa13.39□□□□□ -0.27
CLN6-217ENST00000636964 RGS17Q9UGC6 210 aaPredicted RBP13.39□□□□□ -0.27
CLN6-217ENST00000636964 POLLQ9UGP5 575 aa13.39□□□□□ -0.27
CLN6-217ENST00000636964 GGA1Q9UJY5 639 aa13.39□□□□□ -0.27
CLN6-217ENST00000636964 MYH13Q9UKX3 1938 aa13.38□□□□□ -0.27
CLN6-217ENST00000636964 DIXDC1Q155Q3 683 aa13.38□□□□□ -0.27
CLN6-217ENST00000636964 TAF3Q5VWG9 929 aa13.38□□□□□ -0.27
CLN6-217ENST00000636964 POTEAQ6S8J7 498 aa13.38□□□□□ -0.27
CLN6-217ENST00000636964 ZMYM6O95789 1325 aa13.38□□□□□ -0.27
CLN6-217ENST00000636964 KRT85P78386 507 aa13.38□□□□□ -0.27
CLN6-217ENST00000636964 ZNF804AQ7Z570 1209 aa13.38□□□□□ -0.27
CLN6-217ENST00000636964 TTC6Q86TZ1 520 aa13.38□□□□□ -0.27
CLN6-217ENST00000636964 TDRD7Q8NHU6 1098 aaKnown RBP13.38□□□□□ -0.27
CLN6-217ENST00000636964 LY9Q9HBG7 655 aa13.38□□□□□ -0.27
CLN6-217ENST00000636964 SALL1Q9NSC2 1324 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms