RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 ZNF202O95125 648 aa21.92■■□□□ 1.1
CLN5-216ENST00000636780 PFKFB1P16118 471 aa21.92■■□□□ 1.1
CLN5-216ENST00000636780 FILIP1Q7Z7B0 1213 aa21.92■■□□□ 1.1
CLN5-216ENST00000636780 TDRD7Q8NHU6 1098 aaKnown RBP21.92■■□□□ 1.1
CLN5-216ENST00000636780 FAM84BQ96KN1 310 aaPredicted RBP21.92■■□□□ 1.1
CLN5-216ENST00000636780 CLIP2Q9UDT6 1046 aa21.92■■□□□ 1.1
CLN5-216ENST00000636780 COL1A1P02452 1464 aaPredicted RBP21.92■■□□□ 1.1
CLN5-216ENST00000636780 GOLGA6L19H0YKK7 550 aa21.92■■□□□ 1.1
CLN5-216ENST00000636780 GNPATO15228 680 aa21.92■■□□□ 1.1
CLN5-216ENST00000636780 OXER1Q8TDS5 423 aa21.92■■□□□ 1.1
CLN5-216ENST00000636780 BECN2A8MW95 431 aa21.91■■□□□ 1.1
CLN5-216ENST00000636780 PLA2G4DQ86XP0 818 aa21.91■■□□□ 1.1
CLN5-216ENST00000636780 TICAM2Q86XR7 235 aa21.91■■□□□ 1.1
CLN5-216ENST00000636780 KIAA1524Q8TCG1 905 aa21.91■■□□□ 1.1
CLN5-216ENST00000636780 CACTINQ8WUQ7 758 aaKnown RBP21.91■■□□□ 1.1
CLN5-216ENST00000636780 FAM205CA6NFA0 338 aa21.91■■□□□ 1.1
CLN5-216ENST00000636780 FOXN1O15353 648 aa21.91■■□□□ 1.1
CLN5-216ENST00000636780 HSP90AA4PQ58FG1 418 aa21.91■■□□□ 1.1
CLN5-216ENST00000636780 PPARAQ07869 468 aa21.9■■□□□ 1.1
CLN5-216ENST00000636780 THRAP3Q9Y2W1 955 aaKnown RBP21.9■■□□□ 1.1
CLN5-216ENST00000636780 ATRNO75882 1429 aa21.9■■□□□ 1.1
CLN5-216ENST00000636780 BAZ2BQ9UIF8 2168 aaKnown RBP21.9■■□□□ 1.1
CLN5-216ENST00000636780 STX1AQ16623 288 aa21.9■■□□□ 1.1
CLN5-216ENST00000636780 SHC4Q6S5L8 630 aa21.9■■□□□ 1.1
CLN5-216ENST00000636780 MAGEB6P1A0A0J9YX57 407 aa21.89■■□□□ 1.1
CLN5-216ENST00000636780 WTAPQ15007 396 aa21.89■■□□□ 1.1
CLN5-216ENST00000636780 SHISA4Q96DD7 197 aa21.89■■□□□ 1.1
CLN5-216ENST00000636780 TMEM87BQ96K49 555 aa21.89■■□□□ 1.1
CLN5-216ENST00000636780 CDC5LQ99459 802 aaKnown RBP21.89■■□□□ 1.1
CLN5-216ENST00000636780 CDCA7Q9BWT1 371 aaPredicted RBP21.89■■□□□ 1.1
CLN5-216ENST00000636780 POLR3EQ9NVU0 708 aa21.89■■□□□ 1.1
CLN5-216ENST00000636780 CYP2D6P10635 497 aa21.89■■□□□ 1.09
CLN5-216ENST00000636780 PRDX5P30044 214 aa21.89■■□□□ 1.09
CLN5-216ENST00000636780 AATFQ9NY61 560 aaKnown RBP eCLIP21.89■■□□□ 1.09
CLN5-216ENST00000636780 SSRP1Q08945 709 aaKnown RBP21.88■■□□□ 1.09
CLN5-216ENST00000636780 NOM1Q5C9Z4 860 aaKnown RBP21.88■■□□□ 1.09
CLN5-216ENST00000636780 NPHP1O15259 732 aa21.88■■□□□ 1.09
CLN5-216ENST00000636780 PNOCQ13519 176 aa21.88■■□□□ 1.09
CLN5-216ENST00000636780 PLCH1Q4KWH8 1693 aa21.88■■□□□ 1.09
CLN5-216ENST00000636780 FAM47AQ5JRC9 791 aa21.88■■□□□ 1.09
CLN5-216ENST00000636780 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.88■■□□□ 1.09
CLN5-216ENST00000636780 ALX1Q15699 326 aa21.87■■□□□ 1.09
CLN5-216ENST00000636780 NBPF5PQ86XG9 351 aaPredicted RBP21.87■■□□□ 1.09
CLN5-216ENST00000636780 AK7Q96M32 723 aa21.87■■□□□ 1.09
CLN5-216ENST00000636780 NACAP1Q9BZK3 213 aa21.87■■□□□ 1.09
CLN5-216ENST00000636780 ZNF652Q9Y2D9 606 aa21.87■■□□□ 1.09
CLN5-216ENST00000636780 KCNG4Q8TDN1 519 aa21.87■■□□□ 1.09
CLN5-216ENST00000636780 KIAA1468Q9P260 1216 aa21.87■■□□□ 1.09
CLN5-216ENST00000636780 SLC39A14Q15043 492 aa21.86■■□□□ 1.09
CLN5-216ENST00000636780 SGMS1Q86VZ5 419 aa21.86■■□□□ 1.09
CLN5-216ENST00000636780 RIOK1Q9BRS2 568 aaKnown RBP21.86■■□□□ 1.09
CLN5-216ENST00000636780 MTMR7Q9Y216 660 aa21.86■■□□□ 1.09
CLN5-216ENST00000636780 USP17L12C9JPN9 530 aa21.86■■□□□ 1.09
CLN5-216ENST00000636780 USP17L21D6R901 530 aa21.86■■□□□ 1.09
CLN5-216ENST00000636780 VEGFAP15692 232 aaPredicted RBP21.86■■□□□ 1.09
CLN5-216ENST00000636780 TOB1P50616 345 aaPredicted RBP21.86■■□□□ 1.09
CLN5-216ENST00000636780 PTPAQ15257 358 aa21.86■■□□□ 1.09
CLN5-216ENST00000636780 RTN1Q16799 776 aa21.86■■□□□ 1.09
CLN5-216ENST00000636780 BRAPQ7Z569 592 aa21.86■■□□□ 1.09
CLN5-216ENST00000636780 C16orf45Q96MC5 204 aaPredicted RBP21.86■■□□□ 1.09
CLN5-216ENST00000636780 MAP3K14Q99558 947 aa21.86■■□□□ 1.09
CLN5-216ENST00000636780 DDX60Q8IY21 1712 aaKnown RBP21.86■■□□□ 1.09
CLN5-216ENST00000636780 TNKSO95271 1327 aa21.85■■□□□ 1.09
CLN5-216ENST00000636780 EARS2Q5JPH6 523 aaKnown RBP21.85■■□□□ 1.09
CLN5-216ENST00000636780 USP49Q70CQ1 688 aa21.85■■□□□ 1.09
CLN5-216ENST00000636780 DIS3L2Q8IYB7 885 aaKnown RBP21.85■■□□□ 1.09
CLN5-216ENST00000636780 GRAMD1CQ8IYS0 662 aa21.85■■□□□ 1.09
CLN5-216ENST00000636780 PDILTQ8N807 584 aa21.85■■□□□ 1.09
CLN5-216ENST00000636780 YEATS4O95619 227 aa21.85■■□□□ 1.09
CLN5-216ENST00000636780 TPM2P07951 284 aa21.85■■□□□ 1.09
CLN5-216ENST00000636780 SLC3A2P08195 630 aaKnown RBP21.85■■□□□ 1.09
CLN5-216ENST00000636780 TRIM29Q14134 588 aa21.85■■□□□ 1.09
CLN5-216ENST00000636780 HSP90AA2PQ14568 343 aaPredicted RBP21.85■■□□□ 1.09
CLN5-216ENST00000636780 LONRF3Q496Y0 759 aa21.85■■□□□ 1.09
CLN5-216ENST00000636780 CPLX2Q6PUV4 134 aaKnown RBP21.85■■□□□ 1.09
CLN5-216ENST00000636780 STAG1Q8WVM7 1258 aa21.85■■□□□ 1.09
CLN5-216ENST00000636780 SETDB2Q96T68 719 aa21.85■■□□□ 1.09
CLN5-216ENST00000636780 VPS54Q9P1Q0 977 aa21.85■■□□□ 1.09
CLN5-216ENST00000636780 PLEKHA8P1O95397 391 aa21.84■■□□□ 1.09
CLN5-216ENST00000636780 CAVIN4Q5BKX8 364 aa21.84■■□□□ 1.09
CLN5-216ENST00000636780 ZNF654Q8IZM8 581 aa21.84■■□□□ 1.09
CLN5-216ENST00000636780 UBAC1Q9BSL1 405 aa21.84■■□□□ 1.09
CLN5-216ENST00000636780 BSDC1Q9NW68 430 aaPredicted RBP21.84■■□□□ 1.09
CLN5-216ENST00000636780 PCDHB6Q9Y5E3 794 aa21.84■■□□□ 1.09
CLN5-216ENST00000636780 USP27XA6NNY8 438 aa21.84■■□□□ 1.09
CLN5-216ENST00000636780 WNT7AO00755 349 aa21.84■■□□□ 1.09
CLN5-216ENST00000636780 ADAMTS3O15072 1205 aa21.84■■□□□ 1.09
CLN5-216ENST00000636780 LIFRP42702 1097 aa21.84■■□□□ 1.09
CLN5-216ENST00000636780 RPS8P62241 208 aaKnown RBP21.84■■□□□ 1.09
CLN5-216ENST00000636780 GRIK5Q16478 980 aa21.84■■□□□ 1.09
CLN5-216ENST00000636780 BARGINQ6ZT62 677 aa21.84■■□□□ 1.09
CLN5-216ENST00000636780 FOXP4Q8IVH2 680 aaPredicted RBP21.84■■□□□ 1.09
CLN5-216ENST00000636780 KRT23Q9C075 422 aa21.84■■□□□ 1.09
CLN5-216ENST00000636780 ANO10Q9NW15 660 aa21.84■■□□□ 1.09
CLN5-216ENST00000636780 WDR19Q8NEZ3 1342 aa21.84■■□□□ 1.09
CLN5-216ENST00000636780 UTRNP46939 3433 aa21.84■■□□□ 1.09
CLN5-216ENST00000636780 MECOMQ03112 1051 aa21.83■■□□□ 1.09
CLN5-216ENST00000636780 ATL3Q6DD88 541 aa21.83■■□□□ 1.09
CLN5-216ENST00000636780 NBPF11Q86T75 865 aa21.83■■□□□ 1.09
CLN5-216ENST00000636780 FANCBQ8NB91 859 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms