RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 AFG3L2Q9Y4W6 797 aa22.96■■□□□ 1.27
CLN6-212ENST00000636020 HMGCRP04035 888 aa22.95■■□□□ 1.26
CLN6-212ENST00000636020 NFIAQ12857 509 aa22.95■■□□□ 1.26
CLN6-212ENST00000636020 CDC42EP5Q6NZY7 148 aa22.95■■□□□ 1.26
CLN6-212ENST00000636020 DNAH12Q6ZR08 3092 aa22.94■■□□□ 1.26
CLN6-212ENST00000636020 PTPRAP18433 802 aa22.94■■□□□ 1.26
CLN6-212ENST00000636020 SCYL3Q8IZE3 742 aa22.94■■□□□ 1.26
CLN6-212ENST00000636020 ANKRD13CQ8N6S4 541 aa22.94■■□□□ 1.26
CLN6-212ENST00000636020 HMX1Q9NP08 348 aaPredicted RBP22.94■■□□□ 1.26
CLN6-212ENST00000636020 FAM198AQ9UFP1 575 aa22.94■■□□□ 1.26
CLN6-212ENST00000636020 OGDHLQ9ULD0 1010 aa22.94■■□□□ 1.26
CLN6-212ENST00000636020 CACNA1FO60840 1977 aa22.93■■□□□ 1.26
CLN6-212ENST00000636020 PICK1Q9NRD5 415 aa22.93■■□□□ 1.26
CLN6-212ENST00000636020 DAGLAQ9Y4D2 1042 aa22.93■■□□□ 1.26
CLN6-212ENST00000636020 DDX60LQ5H9U9 1706 aaKnown RBP22.93■■□□□ 1.26
CLN6-212ENST00000636020 PFASO15067 1338 aa22.92■■□□□ 1.26
CLN6-212ENST00000636020 TRIM32Q13049 653 aa22.92■■□□□ 1.26
CLN6-212ENST00000636020 ATRNL1Q5VV63 1379 aa22.91■■□□□ 1.26
CLN6-212ENST00000636020 FAM110CQ1W6H9 321 aa22.91■■□□□ 1.26
CLN6-212ENST00000636020 ZFPM1Q8IX07 1006 aa22.91■■□□□ 1.26
CLN6-212ENST00000636020 VGLL2Q8N8G2 317 aa22.91■■□□□ 1.26
CLN6-212ENST00000636020 GJD2Q9UKL4 321 aa22.91■■□□□ 1.26
CLN6-212ENST00000636020 LRRC24Q50LG9 513 aa22.9■■□□□ 1.26
CLN6-212ENST00000636020 KAZALD1Q96I82 304 aa22.9■■□□□ 1.26
CLN6-212ENST00000636020 C9orf78Q9NZ63 289 aaPredicted RBP22.9■■□□□ 1.26
CLN6-212ENST00000636020 PTPRFP10586 1907 aa22.9■■□□□ 1.26
CLN6-212ENST00000636020 PDE8BO95263 885 aa22.89■■□□□ 1.25
CLN6-212ENST00000636020 METTL24Q5JXM2 366 aa22.89■■□□□ 1.25
CLN6-212ENST00000636020 FAM161BQ96MY7 647 aa22.89■■□□□ 1.25
CLN6-212ENST00000636020 AGTPBP1Q9UPW5 1226 aa22.89■■□□□ 1.25
CLN6-212ENST00000636020 COL2A1P02458 1487 aaPredicted RBP22.89■■□□□ 1.25
CLN6-212ENST00000636020 TTC28Q96AY4 2481 aa22.88■■□□□ 1.25
CLN6-212ENST00000636020 MUC3AQ02505 3323 aa22.88■■□□□ 1.25
CLN6-212ENST00000636020 MDM2Q00987 491 aaPredicted RBP22.88■■□□□ 1.25
CLN6-212ENST00000636020 DIXDC1Q155Q3 683 aa22.88■■□□□ 1.25
CLN6-212ENST00000636020 WDR66Q8TBY9 1149 aa22.88■■□□□ 1.25
CLN6-212ENST00000636020 SUCLG2Q96I99 432 aa22.88■■□□□ 1.25
CLN6-212ENST00000636020 TRIM75PA6NK02 468 aa22.87■■□□□ 1.25
CLN6-212ENST00000636020 VAMP4O75379 141 aa22.87■■□□□ 1.25
CLN6-212ENST00000636020 COL6A1P12109 1028 aa22.87■■□□□ 1.25
CLN6-212ENST00000636020 MAP3K10Q02779 954 aa22.87■■□□□ 1.25
CLN6-212ENST00000636020 USP40Q9NVE5 1235 aa22.87■■□□□ 1.25
CLN6-212ENST00000636020 KIF16BQ96L93 1317 aa22.86■■□□□ 1.25
CLN6-212ENST00000636020 TREML2Q5T2D2 321 aa22.86■■□□□ 1.25
CLN6-212ENST00000636020 WWC1Q8IX03 1113 aa22.86■■□□□ 1.25
CLN6-212ENST00000636020 PNMA3Q9UL41 463 aa22.86■■□□□ 1.25
CLN6-212ENST00000636020 ALDH1L1O75891 902 aa22.85■■□□□ 1.25
CLN6-212ENST00000636020 FGFR2P21802 821 aa22.85■■□□□ 1.25
CLN6-212ENST00000636020 LRRC26Q2I0M4 334 aa22.85■■□□□ 1.25
CLN6-212ENST00000636020 CCDC27Q2M243 656 aa22.85■■□□□ 1.25
CLN6-212ENST00000636020 MAP3K21Q5TCX8 1036 aa22.85■■□□□ 1.25
CLN6-212ENST00000636020 TRIB2Q92519 343 aa22.85■■□□□ 1.25
CLN6-212ENST00000636020 LRRFIP2Q9Y608 721 aaKnown RBP22.85■■□□□ 1.25
CLN6-212ENST00000636020 PHIPQ8WWQ0 1821 aa22.85■■□□□ 1.25
CLN6-212ENST00000636020 CTNND1O60716 968 aaKnown RBP22.84■■□□□ 1.25
CLN6-212ENST00000636020 GCLCP48506 637 aaPredicted RBP22.84■■□□□ 1.25
CLN6-212ENST00000636020 DDX10Q13206 875 aaKnown RBP22.84■■□□□ 1.25
CLN6-212ENST00000636020 IL16Q14005 1332 aa22.83■■□□□ 1.25
CLN6-212ENST00000636020 ENTPD3O75355 529 aa22.83■■□□□ 1.25
CLN6-212ENST00000636020 IFIT1P09914 478 aaKnown RBP22.83■■□□□ 1.25
CLN6-212ENST00000636020 PRDX5P30044 214 aa22.83■■□□□ 1.25
CLN6-212ENST00000636020 RGS3P49796 1198 aa22.83■■□□□ 1.25
CLN6-212ENST00000636020 ZNF697Q5TEC3 545 aa22.83■■□□□ 1.25
CLN6-212ENST00000636020 SH3BP5LQ7L8J4 393 aa22.83■■□□□ 1.25
CLN6-212ENST00000636020 IDI2Q9BXS1 227 aa22.83■■□□□ 1.25
CLN6-212ENST00000636020 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.83■■□□□ 1.25
CLN6-212ENST00000636020 CDH23Q9H251 3354 aa22.83■■□□□ 1.24
CLN6-212ENST00000636020 SLURP2P0DP57 97 aa22.82■■□□□ 1.24
CLN6-212ENST00000636020 RABL6Q3YEC7 729 aaPredicted RBP22.82■■□□□ 1.24
CLN6-212ENST00000636020 CCDC84Q86UT8 332 aaPredicted RBP22.82■■□□□ 1.24
CLN6-212ENST00000636020 PROCA1Q8NCQ7 364 aaPredicted RBP22.82■■□□□ 1.24
CLN6-212ENST00000636020 MAFAQ8NHW3 353 aaPredicted RBP22.82■■□□□ 1.24
CLN6-212ENST00000636020 CDX2Q99626 313 aaPredicted RBP22.82■■□□□ 1.24
CLN6-212ENST00000636020 DOCK2Q92608 1830 aa22.82■■□□□ 1.24
CLN6-212ENST00000636020 NBPF7P0C2Y1 421 aaPredicted RBP22.81■■□□□ 1.24
CLN6-212ENST00000636020 PRKAR2AP13861 404 aaKnown RBP22.81■■□□□ 1.24
CLN6-212ENST00000636020 ZEB1P37275 1124 aaPredicted RBP22.81■■□□□ 1.24
CLN6-212ENST00000636020 PUM3Q15397 648 aaKnown RBP22.81■■□□□ 1.24
CLN6-212ENST00000636020 BICC1Q9H694 974 aaKnown RBP22.81■■□□□ 1.24
CLN6-212ENST00000636020 SPINK5Q9NQ38 1064 aaPredicted RBP22.81■■□□□ 1.24
CLN6-212ENST00000636020 PLXNB2O15031 1838 aa22.8■■□□□ 1.24
CLN6-212ENST00000636020 DOCK1Q14185 1865 aa22.8■■□□□ 1.24
CLN6-212ENST00000636020 ZSCAN29Q8IWY8 852 aaPredicted RBP22.8■■□□□ 1.24
CLN6-212ENST00000636020 SRCIN1Q9C0H9 1055 aa22.8■■□□□ 1.24
CLN6-212ENST00000636020 FANCIQ9NVI1 1328 aa22.8■■□□□ 1.24
CLN6-212ENST00000636020 DDTLA6NHG4 134 aaPredicted RBP22.79■■□□□ 1.24
CLN6-212ENST00000636020 LDHBP07195 334 aaKnown RBP22.79■■□□□ 1.24
CLN6-212ENST00000636020 CYP2B6P20813 491 aa22.79■■□□□ 1.24
CLN6-212ENST00000636020 UTYO14607 1347 aa22.79■■□□□ 1.24
CLN6-212ENST00000636020 XRCC5P13010 732 aaKnown RBP22.78■■□□□ 1.24
CLN6-212ENST00000636020 LHX8Q68G74 356 aa22.78■■□□□ 1.24
CLN6-212ENST00000636020 SLC4A10Q6U841 1118 aa22.78■■□□□ 1.24
CLN6-212ENST00000636020 ANKRD44Q8N8A2 993 aa22.78■■□□□ 1.24
CLN6-212ENST00000636020 KLHDC4Q8TBB5 520 aa22.78■■□□□ 1.24
CLN6-212ENST00000636020 LBHD1Q9BQE6 289 aaPredicted RBP22.78■■□□□ 1.24
CLN6-212ENST00000636020 SEMA6BQ9H3T3 888 aa22.78■■□□□ 1.24
CLN6-212ENST00000636020 PRKRIP1Q9H875 184 aaPredicted RBP22.78■■□□□ 1.24
CLN6-212ENST00000636020 MORF4L1Q9UBU8 362 aa22.78■■□□□ 1.24
CLN6-212ENST00000636020 RFX7Q2KHR2 1363 aa22.77■■□□□ 1.24
CLN6-212ENST00000636020 MYH13Q9UKX3 1938 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms