RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 RAI14Q9P0K7 980 aa18.28■□□□□ 0.52
CLN8-209ENST00000635970 LRP2BPQ9P2M1 347 aa18.28■□□□□ 0.52
CLN8-209ENST00000635970 MAST3O60307 1309 aa18.28■□□□□ 0.52
CLN8-209ENST00000635970 SPDYE2BA6NHP3 402 aa18.27■□□□□ 0.52
CLN8-209ENST00000635970 SPDYE6P0CI01 402 aa18.27■□□□□ 0.52
CLN8-209ENST00000635970 ANGEL2Q5VTE6 544 aaKnown RBP18.27■□□□□ 0.52
CLN8-209ENST00000635970 CHADLQ6NUI6 762 aa18.27■□□□□ 0.52
CLN8-209ENST00000635970 RBM46Q8TBY0 533 aaKnown RBP18.27■□□□□ 0.52
CLN8-209ENST00000635970 PI4K2BQ8TCG2 481 aa18.27■□□□□ 0.52
CLN8-209ENST00000635970 HAUS7Q99871 368 aa18.27■□□□□ 0.52
CLN8-209ENST00000635970 TTC41PQ6P2S7 1318 aa18.26■□□□□ 0.51
CLN8-209ENST00000635970 SPTY2D1Q68D10 685 aaPredicted RBP18.26■□□□□ 0.51
CLN8-209ENST00000635970 MTMR14Q8NCE2 650 aa18.26■□□□□ 0.51
CLN8-209ENST00000635970 NSUN4Q96CB9 384 aaKnown RBP18.26■□□□□ 0.51
CLN8-209ENST00000635970 CLRN2A0PK11 232 aa18.26■□□□□ 0.51
CLN8-209ENST00000635970 IDH1O75874 414 aaKnown RBP18.26■□□□□ 0.51
CLN8-209ENST00000635970 MAP4K4O95819 1239 aaPredicted RBP18.26■□□□□ 0.51
CLN8-209ENST00000635970 PTMAP06454 111 aaKnown RBP18.26■□□□□ 0.51
CLN8-209ENST00000635970 MMP14P50281 582 aa18.26■□□□□ 0.51
CLN8-209ENST00000635970 PAG1Q9NWQ8 432 aa18.26■□□□□ 0.51
CLN8-209ENST00000635970 DAGLAQ9Y4D2 1042 aa18.26■□□□□ 0.51
CLN8-209ENST00000635970 HDLBPQ00341 1268 aaKnown RBP18.25■□□□□ 0.51
CLN8-209ENST00000635970 DLK2Q6UY11 383 aa18.25■□□□□ 0.51
CLN8-209ENST00000635970 SMC1BQ8NDV3 1235 aa18.25■□□□□ 0.51
CLN8-209ENST00000635970 HMGN5P82970 282 aaKnown RBP18.24■□□□□ 0.51
CLN8-209ENST00000635970 ZC3H15Q8WU90 426 aaKnown RBP18.24■□□□□ 0.51
CLN8-209ENST00000635970 PRIMPOLQ96LW4 560 aa18.24■□□□□ 0.51
CLN8-209ENST00000635970 ZDHHC15Q96MV8 337 aa18.24■□□□□ 0.51
CLN8-209ENST00000635970 GLIS2Q9BZE0 524 aaPredicted RBP18.24■□□□□ 0.51
CLN8-209ENST00000635970 TDRD3Q9H7E2 651 aaKnown RBP18.24■□□□□ 0.51
CLN8-209ENST00000635970 ANO2Q9NQ90 1003 aa18.24■□□□□ 0.51
CLN8-209ENST00000635970 PGAP2Q9UHJ9 254 aa18.24■□□□□ 0.51
CLN8-209ENST00000635970 CDK5RAP2Q96SN8 1893 aa18.24■□□□□ 0.51
CLN8-209ENST00000635970 FMR1Q06787 632 aaKnown RBP eCLIP18.24■□□□□ 0.51
CLN8-209ENST00000635970 APOBEC3HQ6NTF7 200 aaKnown RBP18.24■□□□□ 0.51
CLN8-209ENST00000635970 HHIPL2Q6UWX4 724 aa18.24■□□□□ 0.51
CLN8-209ENST00000635970 CNTROBQ8N137 903 aa18.24■□□□□ 0.51
CLN8-209ENST00000635970 FAM13BQ9NYF5 915 aa18.24■□□□□ 0.51
CLN8-209ENST00000635970 ATP6V1DQ9Y5K8 247 aa18.24■□□□□ 0.51
CLN8-209ENST00000635970 ADM5C9JUS6 153 aa18.23■□□□□ 0.51
CLN8-209ENST00000635970 HSPA4P34932 840 aa18.23■□□□□ 0.51
CLN8-209ENST00000635970 CCDC183Q5T5S1 534 aa18.23■□□□□ 0.51
CLN8-209ENST00000635970 ADGRA1Q86SQ6 560 aa18.23■□□□□ 0.51
CLN8-209ENST00000635970 TRPM7Q96QT4 1865 aa18.23■□□□□ 0.51
CLN8-209ENST00000635970 MROH7-TTC4A0A0A0MT08 1334 aa18.23■□□□□ 0.51
CLN8-209ENST00000635970 GAKO14976 1311 aa18.23■□□□□ 0.51
CLN8-209ENST00000635970 TRIM6-TRIM34B2RNG4 842 aa18.22■□□□□ 0.51
CLN8-209ENST00000635970 TRAF5O00463 557 aa18.22■□□□□ 0.51
CLN8-209ENST00000635970 CACNB3P54284 484 aa18.22■□□□□ 0.51
CLN8-209ENST00000635970 DCPSQ96C86 337 aaKnown RBP18.22■□□□□ 0.51
CLN8-209ENST00000635970 MRIQ9BWK5 157 aa18.22■□□□□ 0.51
CLN8-209ENST00000635970 VEZTQ9HBM0 779 aa18.22■□□□□ 0.51
CLN8-209ENST00000635970 GLRX3O76003 335 aaKnown RBP18.22■□□□□ 0.51
CLN8-209ENST00000635970 CHGBP05060 677 aa18.22■□□□□ 0.51
CLN8-209ENST00000635970 TTF1Q15361 905 aaPredicted RBP18.22■□□□□ 0.51
CLN8-209ENST00000635970 NAA16Q6N069 864 aaPredicted RBP18.22■□□□□ 0.51
CLN8-209ENST00000635970 MAGEB6Q8N7X4 407 aa18.22■□□□□ 0.51
CLN8-209ENST00000635970 MYO1BO43795 1136 aa18.21■□□□□ 0.51
CLN8-209ENST00000635970 ITGBL1O95965 494 aaPredicted RBP18.21■□□□□ 0.51
CLN8-209ENST00000635970 PDIA4P13667 645 aaKnown RBP18.21■□□□□ 0.51
CLN8-209ENST00000635970 SPDYE2Q495Y8 402 aa18.21■□□□□ 0.51
CLN8-209ENST00000635970 SLFNL1Q499Z3 407 aa18.21■□□□□ 0.51
CLN8-209ENST00000635970 KRT26Q7Z3Y9 468 aa18.21■□□□□ 0.51
CLN8-209ENST00000635970 USP48Q86UV5 1035 aa18.21■□□□□ 0.51
CLN8-209ENST00000635970 RNF214Q8ND24 703 aa18.21■□□□□ 0.51
CLN8-209ENST00000635970 RILPL2Q969X0 211 aa18.21■□□□□ 0.51
CLN8-209ENST00000635970 ZNF70Q9UC06 446 aaPredicted RBP18.21■□□□□ 0.51
CLN8-209ENST00000635970 PALD1Q9ULE6 856 aa18.21■□□□□ 0.51
CLN8-209ENST00000635970 BTDP43251 543 aa18.21■□□□□ 0.5
CLN8-209ENST00000635970 RBM10P98175 930 aaKnown RBP18.21■□□□□ 0.5
CLN8-209ENST00000635970 MAP3K12Q12852 859 aa18.21■□□□□ 0.5
CLN8-209ENST00000635970 PIBF1Q8WXW3 757 aa18.21■□□□□ 0.5
CLN8-209ENST00000635970 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.21■□□□□ 0.5
CLN8-209ENST00000635970 PITPNM2Q9BZ72 1349 aa18.2■□□□□ 0.5
CLN8-209ENST00000635970 FSTL1Q12841 308 aa18.2■□□□□ 0.5
CLN8-209ENST00000635970 MYRIPQ8NFW9 859 aa18.2■□□□□ 0.5
CLN8-209ENST00000635970 FOCADQ5VW36 1801 aa18.2■□□□□ 0.5
CLN8-209ENST00000635970 TPM3P06753 285 aa18.19■□□□□ 0.5
CLN8-209ENST00000635970 PDE6AP16499 860 aa18.19■□□□□ 0.5
CLN8-209ENST00000635970 C1QTNF8P60827 252 aa18.19■□□□□ 0.5
CLN8-209ENST00000635970 UBE2HP62256 183 aa18.19■□□□□ 0.5
CLN8-209ENST00000635970 GSTO1P78417 241 aa18.19■□□□□ 0.5
CLN8-209ENST00000635970 SLC9C2Q5TAH2 1124 aa18.19■□□□□ 0.5
CLN8-209ENST00000635970 CDC42EP5Q6NZY7 148 aa18.19■□□□□ 0.5
CLN8-209ENST00000635970 CDC37L1Q7L3B6 337 aa18.19■□□□□ 0.5
CLN8-209ENST00000635970 SULF1Q8IWU6 871 aa18.19■□□□□ 0.5
CLN8-209ENST00000635970 SLF2Q8IX21 1173 aa18.19■□□□□ 0.5
CLN8-209ENST00000635970 FAM163AQ96GL9 167 aaPredicted RBP18.19■□□□□ 0.5
CLN8-209ENST00000635970 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.19■□□□□ 0.5
CLN8-209ENST00000635970 TCP10L2B9ZVM9 353 aa18.19■□□□□ 0.5
CLN8-209ENST00000635970 CYP7A1P22680 504 aa18.19■□□□□ 0.5
CLN8-209ENST00000635970 FOXD4L5Q5VV16 416 aaPredicted RBP18.19■□□□□ 0.5
CLN8-209ENST00000635970 PRAMEF18Q5VWM3 479 aa18.19■□□□□ 0.5
CLN8-209ENST00000635970 FOXD4L4Q8WXT5 416 aaPredicted RBP18.19■□□□□ 0.5
CLN8-209ENST00000635970 AATFQ9NY61 560 aaKnown RBP eCLIP18.19■□□□□ 0.5
CLN8-209ENST00000635970 PASKQ96RG2 1323 aa18.18■□□□□ 0.5
CLN8-209ENST00000635970 RPAP1Q9BWH6 1393 aaPredicted RBP18.18■□□□□ 0.5
CLN8-209ENST00000635970 GPR75-ASB3A0A0A6YYF3 556 aa18.18■□□□□ 0.5
CLN8-209ENST00000635970 GTF2F1P35269 517 aaKnown RBP eCLIP18.18■□□□□ 0.5
CLN8-209ENST00000635970 MIGA1Q8NAN2 632 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms