RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ABI1Q8IZP0 508 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 PRPF38AQ8NAV1 312 aaKnown RBP6.18□□□□□ -1.42
SCN1A-209ENST00000635750 DDX27Q96GQ7 796 aaKnown RBP6.18□□□□□ -1.42
SCN1A-209ENST00000635750 CAPZA3Q96KX2 299 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 NKTRP30414 1462 aaKnown RBP6.18□□□□□ -1.42
SCN1A-209ENST00000635750 SPDYE2BA6NHP3 402 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 MAP3K7O43318 606 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 SPDYE6P0CI01 402 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 IL15P40933 162 aaPredicted RBP6.18□□□□□ -1.42
SCN1A-209ENST00000635750 NIM1KQ8IY84 436 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 METTL13Q8N6R0 699 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 MCUR1Q96AQ8 359 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 SLC8A2Q9UPR5 921 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 CHMP2AO43633 222 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 ZEB2O60315 1214 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 HEXIM1O94992 359 aaKnown RBP6.18□□□□□ -1.42
SCN1A-209ENST00000635750 TUBBP07437 444 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 PLCD1P51178 756 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 FBXW4P57775 412 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 CROCCP2Q86T23 111 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 TTC1Q99614 292 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 DENND2AQ9ULE3 1009 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 RAD50Q92878 1312 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 TRIM50Q86XT4 487 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 SDCCAG3Q96C92 435 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 CCDC87Q9NVE4 849 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 TRPC6Q9Y210 931 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 LRRC9Q6ZRR7 1453 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 TRAF5O00463 557 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 GSTA1P08263 222 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 GSTA2P09210 222 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 GTF2A1P52655 376 aaPredicted RBP6.17□□□□□ -1.42
SCN1A-209ENST00000635750 KRT33BQ14525 404 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 KRT81Q14533 505 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 MAP3K21Q5TCX8 1036 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 C1orf228Q6PIY5 440 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 TEX11Q8IYF3 940 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 CNBD1Q8NA66 436 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 KIF9Q9HAQ2 790 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 PLEKHG3A1L390 1219 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 HMGB3O15347 200 aaKnown RBP6.17□□□□□ -1.42
SCN1A-209ENST00000635750 ZNF131P52739 623 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 YARSP54577 528 aaKnown RBP6.17□□□□□ -1.42
SCN1A-209ENST00000635750 ASIC2Q16515 512 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 LARGE2Q8N3Y3 721 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 ARHGEF2Q92974 986 aaKnown RBP6.17□□□□□ -1.42
SCN1A-209ENST00000635750 GCNAQ96QF7 691 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 RSPH14Q9UHP6 348 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 PRPSAP1Q14558 356 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 TRIML1Q8N9V2 468 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 MRPS27Q92552 414 aaKnown RBP6.17□□□□□ -1.42
SCN1A-209ENST00000635750 GPCPD1Q9NPB8 672 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 RTL1A6NKG5 1358 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 GIGYF1O75420 1035 aaPredicted RBP6.17□□□□□ -1.42
SCN1A-209ENST00000635750 SYT1P21579 422 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 PPFIA1Q13136 1202 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 LMNTD2Q8IXW0 634 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 IQUBQ8NA54 791 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 CSRNP1Q96S65 589 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 GUCA1BQ9UMX6 200 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 PI4KAP2A4QPH2 592 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 LMNB1P20700 586 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 TSTA3Q13630 321 aaPredicted RBP6.17□□□□□ -1.42
SCN1A-209ENST00000635750 FCHSD1Q86WN1 690 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 PI4KAP1Q8N8J0 262 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 MAIP1Q8WWC4 291 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 PAG1Q9NWQ8 432 aa6.17□□□□□ -1.42
SCN1A-209ENST00000635750 AQRO60306 1485 aaKnown RBP eCLIP6.17□□□□□ -1.42
SCN1A-209ENST00000635750 Q6ZUG5 572 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 SPDYE1Q8NFV5 336 aaPredicted RBP6.16□□□□□ -1.42
SCN1A-209ENST00000635750 RSAD2Q8WXG1 361 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 LARP6Q9BRS8 491 aaKnown RBP6.16□□□□□ -1.42
SCN1A-209ENST00000635750 PLCB1Q9NQ66 1216 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 SETD1BQ9UPS6 1966 aaKnown RBP6.16□□□□□ -1.42
SCN1A-209ENST00000635750 WASLO00401 505 aaPredicted RBP6.16□□□□□ -1.42
SCN1A-209ENST00000635750 SETSIPP0DME0 302 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 RILPQ96NA2 401 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 ADPGKQ9BRR6 497 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 MIS12Q9H081 205 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 RBSNQ9H1K0 784 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 PYGLP06737 847 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 RNF169Q8NCN4 708 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 SAP30BPQ9UHR5 308 aaKnown RBP6.16□□□□□ -1.42
SCN1A-209ENST00000635750 CASKIN1Q8WXD9 1431 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 HHATQ5VTY9 493 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 B4GALNT4Q76KP1 1039 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 USP48Q86UV5 1035 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 MICALL1Q8N3F8 863 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 RPS6KC1Q96S38 1066 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 LRFN2Q9ULH4 789 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 PTPREP23469 700 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 PCK1P35558 622 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 ARHGAP4P98171 946 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 TNFAIP1Q13829 316 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 GNPTABQ3T906 1256 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 ANO6Q4KMQ2 910 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 HSP90AA4PQ58FG1 418 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 BBS5Q8N3I7 341 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 MRRFQ96E11 262 aaKnown RBP6.16□□□□□ -1.42
SCN1A-209ENST00000635750 GGA1Q9UJY5 639 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms