RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 ZNF653Q96CK0 615 aa19.43■□□□□ 0.7
CACNA1A-215ENST00000635727 NOC4LQ9BVI4 516 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-215ENST00000635727 SUFUQ9UMX1 484 aa19.43■□□□□ 0.7
CACNA1A-215ENST00000635727 MYOM3Q5VTT5 1437 aa19.43■□□□□ 0.7
CACNA1A-215ENST00000635727 ASIC3Q9UHC3 531 aa19.43■□□□□ 0.7
CACNA1A-215ENST00000635727 PARP1P09874 1014 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-215ENST00000635727 PDIA4P13667 645 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-215ENST00000635727 AFAP1L2Q8N4X5 818 aa19.43■□□□□ 0.7
CACNA1A-215ENST00000635727 FAM76AQ8TAV0 307 aa19.42■□□□□ 0.7
CACNA1A-215ENST00000635727 ATP6V1E1P36543 226 aa19.42■□□□□ 0.7
CACNA1A-215ENST00000635727 ZSCAN22P10073 491 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-215ENST00000635727 CD19P15391 556 aa19.42■□□□□ 0.7
CACNA1A-215ENST00000635727 RBM8AQ9Y5S9 174 aaKnown RBP19.42■□□□□ 0.7
CACNA1A-215ENST00000635727 IVLP07476 585 aa19.42■□□□□ 0.7
CACNA1A-215ENST00000635727 MAP7Q14244 749 aa19.42■□□□□ 0.7
CACNA1A-215ENST00000635727 Q3C1V9 767 aa19.42■□□□□ 0.7
CACNA1A-215ENST00000635727 ANKRD42Q8N9B4 389 aa19.42■□□□□ 0.7
CACNA1A-215ENST00000635727 CARD10Q9BWT7 1032 aa19.42■□□□□ 0.7
CACNA1A-215ENST00000635727 MGEA5O60502 916 aa19.42■□□□□ 0.7
CACNA1A-215ENST00000635727 LDHBP07195 334 aaKnown RBP19.42■□□□□ 0.7
CACNA1A-215ENST00000635727 ANKRD35Q8N283 1001 aa19.42■□□□□ 0.7
CACNA1A-215ENST00000635727 CACNA2D3Q8IZS8 1091 aa19.41■□□□□ 0.7
CACNA1A-215ENST00000635727 XAGE3Q8WTP9 111 aa19.41■□□□□ 0.7
CACNA1A-215ENST00000635727 ARHGAP44Q17R89 818 aa19.41■□□□□ 0.7
CACNA1A-215ENST00000635727 ANKRD13DQ6ZTN6 518 aa19.41■□□□□ 0.7
CACNA1A-215ENST00000635727 ASIC2Q16515 512 aa19.41■□□□□ 0.7
CACNA1A-215ENST00000635727 ZNF365Q70YC5 407 aa19.41■□□□□ 0.7
CACNA1A-215ENST00000635727 USH1CQ9Y6N9 552 aa19.41■□□□□ 0.7
CACNA1A-215ENST00000635727 HHATQ5VTY9 493 aa19.41■□□□□ 0.7
CACNA1A-215ENST00000635727 DYMQ7RTS9 669 aa19.41■□□□□ 0.7
CACNA1A-215ENST00000635727 NBPF11Q86T75 865 aa19.41■□□□□ 0.7
CACNA1A-215ENST00000635727 APOL6Q9BWW8 343 aa19.41■□□□□ 0.7
CACNA1A-215ENST00000635727 CPSF2Q9P2I0 782 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-215ENST00000635727 FIS1Q9Y3D6 152 aa19.41■□□□□ 0.7
CACNA1A-215ENST00000635727 GCNT3O95395 438 aa19.41■□□□□ 0.7
CACNA1A-215ENST00000635727 EFCC1Q9HA90 598 aa19.41■□□□□ 0.7
CACNA1A-215ENST00000635727 PLEKHH1Q9ULM0 1364 aa19.41■□□□□ 0.7
CACNA1A-215ENST00000635727 SMTNP53814 917 aa19.4■□□□□ 0.7
CACNA1A-215ENST00000635727 ADAT2Q7Z6V5 191 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-215ENST00000635727 MMS19Q96T76 1030 aa19.4■□□□□ 0.7
CACNA1A-215ENST00000635727 ACBD5Q5T8D3 534 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-215ENST00000635727 TXKP42681 527 aa19.4■□□□□ 0.7
CACNA1A-215ENST00000635727 TRIM56Q9BRZ2 755 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-215ENST00000635727 ARHGAP42A6NI28 874 aa19.4■□□□□ 0.7
CACNA1A-215ENST00000635727 VAV2P52735 878 aa19.4■□□□□ 0.7
CACNA1A-215ENST00000635727 HINFPQ9BQA5 517 aa19.4■□□□□ 0.7
CACNA1A-215ENST00000635727 RUSC2Q8N2Y8 1516 aa19.4■□□□□ 0.7
CACNA1A-215ENST00000635727 UQCRFS1P1P0C7P4 283 aa19.4■□□□□ 0.7
CACNA1A-215ENST00000635727 DZIP3Q86Y13 1208 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-215ENST00000635727 CCDC26Q8TAB7 109 aa19.4■□□□□ 0.7
CACNA1A-215ENST00000635727 TRIM75PA6NK02 468 aa19.39■□□□□ 0.7
CACNA1A-215ENST00000635727 TBC1D10BQ4KMP7 808 aaPredicted RBP19.39■□□□□ 0.7
CACNA1A-215ENST00000635727 KAZNQ674X7 775 aa19.39■□□□□ 0.7
CACNA1A-215ENST00000635727 ALKBH8Q96BT7 664 aaKnown RBP19.39■□□□□ 0.7
CACNA1A-215ENST00000635727 SV2BQ7L1I2 683 aa19.39■□□□□ 0.69
CACNA1A-215ENST00000635727 COPS6Q7L5N1 327 aa19.39■□□□□ 0.69
CACNA1A-215ENST00000635727 MYLK4Q86YV6 388 aaPredicted RBP19.39■□□□□ 0.69
CACNA1A-215ENST00000635727 OPHN1O60890 802 aa19.39■□□□□ 0.69
CACNA1A-215ENST00000635727 KRT15P19012 456 aa19.39■□□□□ 0.69
CACNA1A-215ENST00000635727 KRT81Q14533 505 aa19.39■□□□□ 0.69
CACNA1A-215ENST00000635727 MCMDC2Q4G0Z9 681 aa19.39■□□□□ 0.69
CACNA1A-215ENST00000635727 IGBP1P78318 339 aa19.39■□□□□ 0.69
CACNA1A-215ENST00000635727 MRPS27Q92552 414 aaKnown RBP19.39■□□□□ 0.69
CACNA1A-215ENST00000635727 PDE4DQ08499 809 aa19.39■□□□□ 0.69
CACNA1A-215ENST00000635727 TMX3Q96JJ7 454 aa19.39■□□□□ 0.69
CACNA1A-215ENST00000635727 GDAP1L1Q96MZ0 367 aa19.39■□□□□ 0.69
CACNA1A-215ENST00000635727 RAB3IPQ96QF0 476 aaPredicted RBP19.39■□□□□ 0.69
CACNA1A-215ENST00000635727 IFNL2Q8IZJ0 200 aa19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 MYCT1Q8N699 235 aa19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 KCNG4Q8TDN1 519 aa19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 NUCKS1Q9H1E3 243 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 ZSCAN16Q9H4T2 348 aaPredicted RBP19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 VPS37BQ9H9H4 285 aa19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 RTCBQ9Y3I0 505 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 A0A1B0GVL5 298 aa19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 I3L4J1 428 aa19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 MYSM1Q5VVJ2 828 aa19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 CTAGE3PQ8IX95 158 aa19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 POLKQ9UBT6 870 aa19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 hCG_1642624A0A1W2PR95 340 aa19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 NMIQ13287 307 aaPredicted RBP19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 NOLC1Q14978 699 aaKnown RBP eCLIP19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 CLNS1AP54105 237 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 NELFCDQ8IXH7 590 aa19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 CNNM2Q9H8M5 875 aa19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 PAG1Q9NWQ8 432 aa19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 JADE1Q6IE81 842 aa19.38■□□□□ 0.69
CACNA1A-215ENST00000635727 FRMD3A2A2Y4 597 aa19.37■□□□□ 0.69
CACNA1A-215ENST00000635727 VPS41P49754 854 aa19.37■□□□□ 0.69
CACNA1A-215ENST00000635727 LIN9Q5TKA1 542 aa19.37■□□□□ 0.69
CACNA1A-215ENST00000635727 TSPYL2Q9H2G4 693 aaPredicted RBP19.37■□□□□ 0.69
CACNA1A-215ENST00000635727 TNNC1P63316 161 aa19.37■□□□□ 0.69
CACNA1A-215ENST00000635727 SLFN5Q08AF3 891 aa19.37■□□□□ 0.69
CACNA1A-215ENST00000635727 YARSP54577 528 aaKnown RBP19.37■□□□□ 0.69
CACNA1A-215ENST00000635727 PIK3AP1Q6ZUJ8 805 aa19.37■□□□□ 0.69
CACNA1A-215ENST00000635727 CDC26Q8NHZ8 85 aa19.37■□□□□ 0.69
CACNA1A-215ENST00000635727 SMCR8Q8TEV9 937 aaPredicted RBP19.37■□□□□ 0.69
CACNA1A-215ENST00000635727 AMOTL2Q9Y2J4 779 aa19.37■□□□□ 0.69
CACNA1A-215ENST00000635727 TSGA10Q9BZW7 698 aa19.37■□□□□ 0.69
CACNA1A-215ENST00000635727 CD2APQ9Y5K6 639 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms