RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 NFIAQ12857 509 aa17.24■□□□□ 0.35
LINC00339-208ENST00000634934 CHADLQ6NUI6 762 aa17.24■□□□□ 0.35
LINC00339-208ENST00000634934 LSG1Q9H089 658 aaKnown RBP17.24■□□□□ 0.35
LINC00339-208ENST00000634934 TDO2P48775 406 aa17.23■□□□□ 0.35
LINC00339-208ENST00000634934 IFNL3Q8IZI9 196 aa17.23■□□□□ 0.35
LINC00339-208ENST00000634934 DSCC1Q9BVC3 393 aa17.23■□□□□ 0.35
LINC00339-208ENST00000634934 EPB41L4AQ9HCS5 686 aaPredicted RBP17.23■□□□□ 0.35
LINC00339-208ENST00000634934 DCP1AQ9NPI6 582 aaPredicted RBP17.23■□□□□ 0.35
LINC00339-208ENST00000634934 ATP8A2Q9NTI2 1148 aa17.23■□□□□ 0.35
LINC00339-208ENST00000634934 FLT1P17948 1338 aa17.22■□□□□ 0.35
LINC00339-208ENST00000634934 FOXP2O15409 715 aa17.22■□□□□ 0.35
LINC00339-208ENST00000634934 TCP10Q12799 353 aa17.22■□□□□ 0.35
LINC00339-208ENST00000634934 ANGEL2Q5VTE6 544 aaKnown RBP17.22■□□□□ 0.35
LINC00339-208ENST00000634934 IDI2Q9BXS1 227 aa17.22■□□□□ 0.35
LINC00339-208ENST00000634934 NAPBQ9H115 298 aa17.22■□□□□ 0.35
LINC00339-208ENST00000634934 DDX4Q9NQI0 724 aaKnown RBP17.22■□□□□ 0.35
LINC00339-208ENST00000634934 GGA3Q9NZ52 723 aa17.22■□□□□ 0.35
LINC00339-208ENST00000634934 SAP30BPQ9UHR5 308 aaKnown RBP17.22■□□□□ 0.35
LINC00339-208ENST00000634934 RPAP1Q9BWH6 1393 aaPredicted RBP17.22■□□□□ 0.35
LINC00339-208ENST00000634934 POLR2AP24928 1970 aaKnown RBP17.22■□□□□ 0.35
LINC00339-208ENST00000634934 MAP4K1Q92918 833 aa17.21■□□□□ 0.35
LINC00339-208ENST00000634934 MCM9Q9NXL9 1143 aa17.21■□□□□ 0.35
LINC00339-208ENST00000634934 FAM198AQ9UFP1 575 aa17.21■□□□□ 0.35
LINC00339-208ENST00000634934 SCAF8Q9UPN6 1271 aaKnown RBP17.21■□□□□ 0.35
LINC00339-208ENST00000634934 FGAP02671 866 aa17.21■□□□□ 0.34
LINC00339-208ENST00000634934 FMR1Q06787 632 aaKnown RBP eCLIP17.21■□□□□ 0.34
LINC00339-208ENST00000634934 FSTL1Q12841 308 aa17.21■□□□□ 0.34
LINC00339-208ENST00000634934 SLC4A8Q2Y0W8 1093 aa17.21■□□□□ 0.34
LINC00339-208ENST00000634934 GIMAP6Q6P9H5 292 aa17.21■□□□□ 0.34
LINC00339-208ENST00000634934 DLK2Q6UY11 383 aa17.21■□□□□ 0.34
LINC00339-208ENST00000634934 RBM8AQ9Y5S9 174 aaKnown RBP17.21■□□□□ 0.34
LINC00339-208ENST00000634934 U3KPZ7 1027 aaPredicted RBP17.21■□□□□ 0.34
LINC00339-208ENST00000634934 POLR3DP05423 398 aaPredicted RBP17.2■□□□□ 0.34
LINC00339-208ENST00000634934 TNNI2P48788 182 aa17.2■□□□□ 0.34
LINC00339-208ENST00000634934 TNFAIP1Q13829 316 aa17.2■□□□□ 0.34
LINC00339-208ENST00000634934 ALX1Q15699 326 aa17.2■□□□□ 0.34
LINC00339-208ENST00000634934 FKBP1CQ5VVH2 108 aa17.2■□□□□ 0.34
LINC00339-208ENST00000634934 ZSCAN29Q8IWY8 852 aaPredicted RBP17.2■□□□□ 0.34
LINC00339-208ENST00000634934 ZFPM1Q8IX07 1006 aa17.2■□□□□ 0.34
LINC00339-208ENST00000634934 DCPSQ96C86 337 aaKnown RBP17.2■□□□□ 0.34
LINC00339-208ENST00000634934 USP26Q9BXU7 913 aa17.2■□□□□ 0.34
LINC00339-208ENST00000634934 OSBPL5Q9H0X9 879 aaPredicted RBP17.2■□□□□ 0.34
LINC00339-208ENST00000634934 MKRN1Q9UHC7 482 aaKnown RBP17.2■□□□□ 0.34
LINC00339-208ENST00000634934 CTNNA3Q9UI47 895 aa17.2■□□□□ 0.34
LINC00339-208ENST00000634934 MINDY4BA8MYZ0 360 aa17.19■□□□□ 0.34
LINC00339-208ENST00000634934 USP17L12C9JPN9 530 aa17.19■□□□□ 0.34
LINC00339-208ENST00000634934 USP17L21D6R901 530 aa17.19■□□□□ 0.34
LINC00339-208ENST00000634934 ENTPD3O75355 529 aa17.19■□□□□ 0.34
LINC00339-208ENST00000634934 ITGBL1O95965 494 aaPredicted RBP17.19■□□□□ 0.34
LINC00339-208ENST00000634934 APOBEC3FQ8IUX4 373 aaKnown RBP17.19■□□□□ 0.34
LINC00339-208ENST00000634934 AMOTL1Q8IY63 956 aa17.19■□□□□ 0.34
LINC00339-208ENST00000634934 UPF2Q9HAU5 1272 aaKnown RBP17.19■□□□□ 0.34
LINC00339-208ENST00000634934 DAXXQ9UER7 740 aaPredicted RBP17.19■□□□□ 0.34
LINC00339-208ENST00000634934 PALD1Q9ULE6 856 aa17.19■□□□□ 0.34
LINC00339-208ENST00000634934 ECM29Q5VYK3 1845 aa17.18■□□□□ 0.34
LINC00339-208ENST00000634934 CYP2D7A0A087X1C5 515 aa17.18■□□□□ 0.34
LINC00339-208ENST00000634934 TRAF5O00463 557 aa17.18■□□□□ 0.34
LINC00339-208ENST00000634934 NPM3O75607 178 aaKnown RBP17.18■□□□□ 0.34
LINC00339-208ENST00000634934 CYP2D6P10635 497 aa17.18■□□□□ 0.34
LINC00339-208ENST00000634934 RASA3Q14644 834 aa17.18■□□□□ 0.34
LINC00339-208ENST00000634934 CTR9Q6PD62 1173 aa17.18■□□□□ 0.34
LINC00339-208ENST00000634934 ZC3H15Q8WU90 426 aaKnown RBP17.18■□□□□ 0.34
LINC00339-208ENST00000634934 FAM151AQ8WW52 585 aa17.18■□□□□ 0.34
LINC00339-208ENST00000634934 GLIS2Q9BZE0 524 aaPredicted RBP17.18■□□□□ 0.34
LINC00339-208ENST00000634934 TMEM39BQ9GZU3 492 aa17.18■□□□□ 0.34
LINC00339-208ENST00000634934 ARPP21Q9UBL0 812 aaPredicted RBP17.18■□□□□ 0.34
LINC00339-208ENST00000634934 PGAP2Q9UHJ9 254 aa17.18■□□□□ 0.34
LINC00339-208ENST00000634934 HAND2P61296 217 aa17.17■□□□□ 0.34
LINC00339-208ENST00000634934 FAM83AQ86UY5 434 aa17.17■□□□□ 0.34
LINC00339-208ENST00000634934 DEFB129Q9H1M3 183 aa17.17■□□□□ 0.34
LINC00339-208ENST00000634934 CNTNAP1P78357 1384 aa17.17■□□□□ 0.34
LINC00339-208ENST00000634934 CEP350Q5VT06 3117 aa17.17■□□□□ 0.34
LINC00339-208ENST00000634934 ZMYM6O95789 1325 aa17.17■□□□□ 0.34
LINC00339-208ENST00000634934 PASKQ96RG2 1323 aa17.17■□□□□ 0.34
LINC00339-208ENST00000634934 PITPNM2Q9BZ72 1349 aa17.17■□□□□ 0.34
LINC00339-208ENST00000634934 ADM5C9JUS6 153 aa17.16■□□□□ 0.34
LINC00339-208ENST00000634934 MCCP23508 829 aa17.16■□□□□ 0.34
LINC00339-208ENST00000634934 IMMTQ16891 758 aaKnown RBP17.16■□□□□ 0.34
LINC00339-208ENST00000634934 SULF1Q8IWU6 871 aa17.16■□□□□ 0.34
LINC00339-208ENST00000634934 DDTLA6NHG4 134 aaPredicted RBP17.16■□□□□ 0.34
LINC00339-208ENST00000634934 ZNF213O14771 459 aa17.16■□□□□ 0.34
LINC00339-208ENST00000634934 EPB41L2O43491 1005 aaKnown RBP17.16■□□□□ 0.34
LINC00339-208ENST00000634934 HLA-DOAP06340 250 aa17.16■□□□□ 0.34
LINC00339-208ENST00000634934 HTRA3P83110 453 aa17.16■□□□□ 0.34
LINC00339-208ENST00000634934 EVX2Q03828 476 aa17.16■□□□□ 0.34
LINC00339-208ENST00000634934 SBK1Q52WX2 424 aa17.16■□□□□ 0.34
LINC00339-208ENST00000634934 CREB3L3Q68CJ9 461 aa17.16■□□□□ 0.34
LINC00339-208ENST00000634934 SH3BP5LQ7L8J4 393 aa17.16■□□□□ 0.34
LINC00339-208ENST00000634934 KRT26Q7Z3Y9 468 aa17.16■□□□□ 0.34
LINC00339-208ENST00000634934 TTC6Q86TZ1 520 aa17.16■□□□□ 0.34
LINC00339-208ENST00000634934 USP48Q86UV5 1035 aa17.16■□□□□ 0.34
LINC00339-208ENST00000634934 STK11IPQ8N1F8 1099 aa17.16■□□□□ 0.34
LINC00339-208ENST00000634934 DHX36Q9H2U1 1008 aaKnown RBP17.16■□□□□ 0.34
LINC00339-208ENST00000634934 SLC27A2O14975 620 aa17.15■□□□□ 0.34
LINC00339-208ENST00000634934 PLCD1P51178 756 aa17.15■□□□□ 0.34
LINC00339-208ENST00000634934 CTDSPL2Q05D32 466 aa17.15■□□□□ 0.34
LINC00339-208ENST00000634934 PPARAQ07869 468 aa17.15■□□□□ 0.34
LINC00339-208ENST00000634934 NECTIN1Q15223 517 aa17.15■□□□□ 0.34
LINC00339-208ENST00000634934 C12orf60Q5U649 245 aa17.15■□□□□ 0.34
LINC00339-208ENST00000634934 RNF20Q5VTR2 975 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms