RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 TMEM265A0A087WTH1 108 aa4.76□□□□□ -1.65
SMARCB1-208ENST00000634926 NEFMP07197 916 aa4.76□□□□□ -1.65
SMARCB1-208ENST00000634926 ZP2Q05996 745 aa4.76□□□□□ -1.65
SMARCB1-208ENST00000634926 PDE3AQ14432 1141 aa4.76□□□□□ -1.65
SMARCB1-208ENST00000634926 SNX29Q8TEQ0 813 aa4.76□□□□□ -1.65
SMARCB1-208ENST00000634926 PPP1R16BQ96T49 567 aa4.76□□□□□ -1.65
SMARCB1-208ENST00000634926 CORO1BQ9BR76 489 aa4.76□□□□□ -1.65
SMARCB1-208ENST00000634926 ZC3H12CQ9C0D7 883 aaKnown RBP4.76□□□□□ -1.65
SMARCB1-208ENST00000634926 MKNK2Q9HBH9 465 aa4.76□□□□□ -1.65
SMARCB1-208ENST00000634926 AMOTL2Q9Y2J4 779 aa4.76□□□□□ -1.65
SMARCB1-208ENST00000634926 GLI1P08151 1106 aa4.75□□□□□ -1.65
SMARCB1-208ENST00000634926 HCLS1P14317 486 aaPredicted RBP4.75□□□□□ -1.65
SMARCB1-208ENST00000634926 CTSWP56202 376 aa4.75□□□□□ -1.65
SMARCB1-208ENST00000634926 TTLL4Q14679 1199 aa4.75□□□□□ -1.65
SMARCB1-208ENST00000634926 NKPD1Q17RQ9 610 aa4.75□□□□□ -1.65
SMARCB1-208ENST00000634926 SPACA3Q8IXA5 215 aa4.75□□□□□ -1.65
SMARCB1-208ENST00000634926 SMYD4Q8IYR2 804 aaPredicted RBP4.75□□□□□ -1.65
SMARCB1-208ENST00000634926 DIRC2Q96SL1 478 aa4.75□□□□□ -1.65
SMARCB1-208ENST00000634926 CD320Q9NPF0 282 aa4.75□□□□□ -1.65
SMARCB1-208ENST00000634926 ZNF777Q9ULD5 760 aaPredicted RBP4.75□□□□□ -1.65
SMARCB1-208ENST00000634926 SYNGAP1Q96PV0 1343 aa4.74□□□□□ -1.65
SMARCB1-208ENST00000634926 PCSK2P16519 638 aa4.74□□□□□ -1.65
SMARCB1-208ENST00000634926 IKZF1Q13422 519 aa4.74□□□□□ -1.65
SMARCB1-208ENST00000634926 USPL1Q5W0Q7 1092 aa4.74□□□□□ -1.65
SMARCB1-208ENST00000634926 TOP6BLQ8N6T0 577 aa4.74□□□□□ -1.65
SMARCB1-208ENST00000634926 ZNF576Q9H609 170 aa4.74□□□□□ -1.65
SMARCB1-208ENST00000634926 LIN7BQ9HAP6 207 aa4.74□□□□□ -1.65
SMARCB1-208ENST00000634926 FZD6O60353 706 aa4.73□□□□□ -1.65
SMARCB1-208ENST00000634926 ATP2B4P23634 1241 aa4.73□□□□□ -1.65
SMARCB1-208ENST00000634926 ATG7O95352 703 aa4.72□□□□□ -1.65
SMARCB1-208ENST00000634926 ZNF157P51786 506 aaPredicted RBP4.72□□□□□ -1.65
SMARCB1-208ENST00000634926 ID3Q02535 119 aa4.72□□□□□ -1.65
SMARCB1-208ENST00000634926 FAAP100Q0VG06 881 aa4.72□□□□□ -1.65
SMARCB1-208ENST00000634926 KCNA10Q16322 511 aa4.72□□□□□ -1.65
SMARCB1-208ENST00000634926 HP1BP3Q5SSJ5 553 aaPredicted RBP4.72□□□□□ -1.65
SMARCB1-208ENST00000634926 MPZL3Q6UWV2 235 aa4.72□□□□□ -1.65
SMARCB1-208ENST00000634926 UBE3DQ7Z6J8 389 aa4.72□□□□□ -1.65
SMARCB1-208ENST00000634926 ISL2Q96A47 359 aa4.72□□□□□ -1.65
SMARCB1-208ENST00000634926 KIRREL1Q96J84 757 aa4.72□□□□□ -1.65
SMARCB1-208ENST00000634926 NSUN3Q9H649 340 aaKnown RBP4.72□□□□□ -1.65
SMARCB1-208ENST00000634926 PIDD1Q9HB75 910 aa4.72□□□□□ -1.65
SMARCB1-208ENST00000634926 CCDC87Q9NVE4 849 aa4.72□□□□□ -1.65
SMARCB1-208ENST00000634926 SNX11Q9Y5W9 270 aa4.72□□□□□ -1.65
SMARCB1-208ENST00000634926 NFIBO00712 420 aa4.71□□□□□ -1.66
SMARCB1-208ENST00000634926 RNGTTO60942 597 aaKnown RBP4.71□□□□□ -1.66
SMARCB1-208ENST00000634926 ITPKAP23677 461 aa4.71□□□□□ -1.66
SMARCB1-208ENST00000634926 AFMP43652 599 aa4.71□□□□□ -1.66
SMARCB1-208ENST00000634926 KIF4BQ2VIQ3 1234 aa4.71□□□□□ -1.66
SMARCB1-208ENST00000634926 ATG14Q6ZNE5 492 aa4.71□□□□□ -1.66
SMARCB1-208ENST00000634926 ARHGAP27Q6ZUM4 889 aa4.71□□□□□ -1.66
SMARCB1-208ENST00000634926 GALNT12Q8IXK2 581 aa4.71□□□□□ -1.66
SMARCB1-208ENST00000634926 TTC16Q8NEE8 873 aa4.71□□□□□ -1.66
SMARCB1-208ENST00000634926 GTF3C2Q8WUA4 911 aaPredicted RBP4.71□□□□□ -1.66
SMARCB1-208ENST00000634926 ATXN3LQ9H3M9 355 aa4.71□□□□□ -1.66
SMARCB1-208ENST00000634926 A0A0G2JLL6 359 aaPredicted RBP4.7□□□□□ -1.66
SMARCB1-208ENST00000634926 ETV2O00321 342 aaPredicted RBP4.7□□□□□ -1.66
SMARCB1-208ENST00000634926 EIF4EBP3O60516 100 aaPredicted RBP4.7□□□□□ -1.66
SMARCB1-208ENST00000634926 TMEM67Q5HYA8 995 aa4.7□□□□□ -1.66
SMARCB1-208ENST00000634926 CYFIP1Q7L576 1253 aa4.7□□□□□ -1.66
SMARCB1-208ENST00000634926 GJD3Q8N144 294 aa4.7□□□□□ -1.66
SMARCB1-208ENST00000634926 FBXO15Q8NCQ5 510 aaPredicted RBP4.7□□□□□ -1.66
SMARCB1-208ENST00000634926 ASB11Q8WXH4 323 aa4.7□□□□□ -1.66
SMARCB1-208ENST00000634926 CNTNAP4Q9C0A0 1308 aa4.7□□□□□ -1.66
SMARCB1-208ENST00000634926 MED14OSP0DP75 135 aa4.69□□□□□ -1.66
SMARCB1-208ENST00000634926 NPR3P17342 541 aa4.69□□□□□ -1.66
SMARCB1-208ENST00000634926 HOMEZQ8IX15 550 aa4.69□□□□□ -1.66
SMARCB1-208ENST00000634926 STK35Q8TDR2 534 aa4.69□□□□□ -1.66
SMARCB1-208ENST00000634926 RELTQ969Z4 430 aa4.69□□□□□ -1.66
SMARCB1-208ENST00000634926 CARS2Q9HA77 564 aaKnown RBP4.69□□□□□ -1.66
SMARCB1-208ENST00000634926 ZFYVE1Q9HBF4 777 aa4.69□□□□□ -1.66
SMARCB1-208ENST00000634926 PCOLCE2Q9UKZ9 415 aa4.69□□□□□ -1.66
SMARCB1-208ENST00000634926 SMG5Q9UPR3 1016 aaKnown RBP4.69□□□□□ -1.66
SMARCB1-208ENST00000634926 CC2D2AQ9P2K1 1620 aa4.68□□□□□ -1.66
SMARCB1-208ENST00000634926 SUPT5HO00267 1087 aaKnown RBP4.68□□□□□ -1.66
SMARCB1-208ENST00000634926 AP3B2Q13367 1082 aa4.68□□□□□ -1.66
SMARCB1-208ENST00000634926 KIAA0319Q5VV43 1072 aa4.68□□□□□ -1.66
SMARCB1-208ENST00000634926 PDZD3Q86UT5 571 aa4.68□□□□□ -1.66
SMARCB1-208ENST00000634926 GGNQ86UU5 652 aa4.68□□□□□ -1.66
SMARCB1-208ENST00000634926 ATP13A1Q9HD20 1204 aa4.68□□□□□ -1.66
SMARCB1-208ENST00000634926 ABCB6Q9NP58 842 aa4.68□□□□□ -1.66
SMARCB1-208ENST00000634926 EIF4G1Q04637 1599 aaKnown RBP4.68□□□□□ -1.66
SMARCB1-208ENST00000634926 PRR33A8MZF0 331 aa4.67□□□□□ -1.66
SMARCB1-208ENST00000634926 FOXD2O60548 495 aaPredicted RBP4.67□□□□□ -1.66
SMARCB1-208ENST00000634926 EOMESO95936 686 aa4.67□□□□□ -1.66
SMARCB1-208ENST00000634926 TMEM253P0C7T8 217 aa4.67□□□□□ -1.66
SMARCB1-208ENST00000634926 NTF4P34130 210 aa4.67□□□□□ -1.66
SMARCB1-208ENST00000634926 LINC00310P59036 64 aa4.67□□□□□ -1.66
SMARCB1-208ENST00000634926 IRF2BPLQ9H1B7 796 aa4.67□□□□□ -1.66
SMARCB1-208ENST00000634926 SEMA3GQ9NS98 782 aa4.67□□□□□ -1.66
SMARCB1-208ENST00000634926 SCRIBQ14160 1630 aa4.66□□□□□ -1.66
SMARCB1-208ENST00000634926 IGF2BP3O00425 579 aaKnown RBP eCLIP4.66□□□□□ -1.66
SMARCB1-208ENST00000634926 NUAK1O60285 661 aa4.66□□□□□ -1.66
SMARCB1-208ENST00000634926 GSTP1P09211 210 aaKnown RBP4.66□□□□□ -1.66
SMARCB1-208ENST00000634926 SLFN14P0C7P3 912 aa4.66□□□□□ -1.66
SMARCB1-208ENST00000634926 GDNFP39905 211 aa4.66□□□□□ -1.66
SMARCB1-208ENST00000634926 EHHADHQ08426 723 aa4.66□□□□□ -1.66
SMARCB1-208ENST00000634926 ZC3H12AQ5D1E8 599 aaKnown RBP4.66□□□□□ -1.66
SMARCB1-208ENST00000634926 CIAPIN1Q6FI81 312 aa4.66□□□□□ -1.66
SMARCB1-208ENST00000634926 MPRIPQ6WCQ1 1025 aa4.66□□□□□ -1.66
SMARCB1-208ENST00000634926 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms