RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 RXRAP19793 462 aa12.64□□□□□ -0.39
SRSF4-208ENST00000634348 DMTNQ08495 405 aa12.64□□□□□ -0.39
SRSF4-208ENST00000634348 ATP2B3Q16720 1220 aa12.64□□□□□ -0.39
SRSF4-208ENST00000634348 CEP70Q8NHQ1 597 aa12.64□□□□□ -0.39
SRSF4-208ENST00000634348 SH2D4AQ9H788 454 aa12.64□□□□□ -0.39
SRSF4-208ENST00000634348 CALM1P0DP23 149 aa12.64□□□□□ -0.39
SRSF4-208ENST00000634348 CALM2P0DP24 149 aa12.64□□□□□ -0.39
SRSF4-208ENST00000634348 CALM3P0DP25 149 aa12.64□□□□□ -0.39
SRSF4-208ENST00000634348 TROVE2P10155 538 aaKnown RBP eCLIP12.64□□□□□ -0.391e-8■■■■■ 39.8
SRSF4-208ENST00000634348 NBPF6Q5VWK0 638 aa12.64□□□□□ -0.39
SRSF4-208ENST00000634348 MYRIPQ8NFW9 859 aa12.64□□□□□ -0.39
SRSF4-208ENST00000634348 FAM71BQ8TC56 605 aa12.64□□□□□ -0.39
SRSF4-208ENST00000634348 NBPF4Q96M43 638 aa12.64□□□□□ -0.39
SRSF4-208ENST00000634348 A0A1B0GW55 424 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 KDM1AO60341 852 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 DUX4L2P0CJ85 424 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 DUX4L3P0CJ86 424 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 DUX4L4P0CJ87 422 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 DUX4L5P0CJ88 424 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 DUX4L6P0CJ89 424 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 DUX4L7P0CJ90 424 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 ECHDC1Q9NTX5 307 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 DUX4Q9UBX2 424 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 HDAC9Q9UKV0 1011 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 GAPVD1Q14C86 1478 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 DHX58Q96C10 678 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 SH3GL2Q99962 352 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 JPH2Q9BR39 696 aaPredicted RBP12.63□□□□□ -0.39
SRSF4-208ENST00000634348 ALG1Q9BT22 464 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 SLC24A3Q9HC58 644 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 CCDC124Q96CT7 223 aaKnown RBP12.63□□□□□ -0.39
SRSF4-208ENST00000634348 MED4Q9NPJ6 270 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 LRRC9Q6ZRR7 1453 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 SLC4A1P02730 911 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 MRPS15P82914 257 aaKnown RBP12.63□□□□□ -0.39
SRSF4-208ENST00000634348 USP48Q86UV5 1035 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 APLFQ8IW19 511 aaPredicted RBP12.63□□□□□ -0.39
SRSF4-208ENST00000634348 CCDC138Q96M89 665 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 LRRC27Q9C0I9 530 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 AQRO60306 1485 aaKnown RBP eCLIP12.63□□□□□ -0.391e-7■■■□□ 18.5
SRSF4-208ENST00000634348 PDE4BQ07343 736 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 SPAG1Q07617 926 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 FAM200AQ8TCP9 573 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 RNASE9P60153 205 aaKnown RBP12.63□□□□□ -0.39
SRSF4-208ENST00000634348 CHRNA2Q15822 529 aa12.63□□□□□ -0.39
SRSF4-208ENST00000634348 DNM1Q05193 864 aaKnown RBP12.62□□□□□ -0.39
SRSF4-208ENST00000634348 NGLY1Q96IV0 654 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 C16orf71Q8IYS4 520 aaPredicted RBP12.62□□□□□ -0.39
SRSF4-208ENST00000634348 TMX3Q96JJ7 454 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 CCDC42Q96M95 316 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 TSPY3P0CV98 308 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 TSPY8P0CW00 308 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 RBM26Q5T8P6 1007 aaKnown RBP12.62□□□□□ -0.39
SRSF4-208ENST00000634348 NCOA7Q8NI08 942 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 TSC22D4Q9Y3Q8 395 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 CFAP61Q8NHU2 1237 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 TRIM8Q9BZR9 551 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 PPANQ9NQ55 473 aaKnown RBP12.62□□□□□ -0.39
SRSF4-208ENST00000634348 WDHD1O75717 1129 aaPredicted RBP12.62□□□□□ -0.39
SRSF4-208ENST00000634348 NMIQ13287 307 aaPredicted RBP12.62□□□□□ -0.39
SRSF4-208ENST00000634348 WTAPQ15007 396 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 IFIT1BQ5T764 474 aaKnown RBP12.62□□□□□ -0.39
SRSF4-208ENST00000634348 C8orf74Q6P047 294 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 SRGAP1Q7Z6B7 1085 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 MSANTD4Q8NCY6 345 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 DACT1Q9NYF0 836 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 RILPL1Q5EBL4 403 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 SEL1L2Q5TEA6 688 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 ZNF711Q9Y462 761 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 WDR97A6NE52 1622 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 ASIC1P78348 528 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 CCDC15Q0P6D6 951 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 TMCO5AQ8N6Q1 288 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 ACSBG1Q96GR2 724 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 CABP5Q9NP86 173 aa12.62□□□□□ -0.39
SRSF4-208ENST00000634348 TRIM6Q9C030 488 aaPredicted RBP12.61□□□□□ -0.39
SRSF4-208ENST00000634348 BAG5Q9UL15 447 aa12.61□□□□□ -0.39
SRSF4-208ENST00000634348 PRKG1Q13976 671 aa12.61□□□□□ -0.39
SRSF4-208ENST00000634348 EHMT1Q9H9B1 1298 aa12.61□□□□□ -0.39
SRSF4-208ENST00000634348 ORC6Q9Y5N6 252 aa12.61□□□□□ -0.39
SRSF4-208ENST00000634348 S100BP04271 92 aaPredicted RBP12.61□□□□□ -0.39
SRSF4-208ENST00000634348 PROCA1Q8NCQ7 364 aaPredicted RBP12.61□□□□□ -0.39
SRSF4-208ENST00000634348 OCA2Q04671 838 aa12.61□□□□□ -0.39
SRSF4-208ENST00000634348 FAM186BQ8IYM0 893 aa12.61□□□□□ -0.39
SRSF4-208ENST00000634348 TOP2AP11388 1531 aaKnown RBP12.61□□□□□ -0.39
SRSF4-208ENST00000634348 ST13P4Q8IZP2 240 aaPredicted RBP12.61□□□□□ -0.39
SRSF4-208ENST00000634348 ARMC2Q8NEN0 867 aa12.61□□□□□ -0.39
SRSF4-208ENST00000634348 ZCRB1Q8TBF4 217 aaKnown RBP12.61□□□□□ -0.39
SRSF4-208ENST00000634348 DBF4Q9UBU7 674 aaPredicted RBP12.61□□□□□ -0.39
SRSF4-208ENST00000634348 CTAGE3PQ8IX95 158 aa12.6□□□□□ -0.39
SRSF4-208ENST00000634348 GABPB2Q8TAK5 448 aaPredicted RBP12.6□□□□□ -0.39
SRSF4-208ENST00000634348 CYP7A1P22680 504 aa12.6□□□□□ -0.39
SRSF4-208ENST00000634348 MTMR3Q13615 1198 aa12.6□□□□□ -0.39
SRSF4-208ENST00000634348 DBNLQ9UJU6 430 aaKnown RBP12.6□□□□□ -0.39
SRSF4-208ENST00000634348 EVI5O60447 810 aa12.6□□□□□ -0.39
SRSF4-208ENST00000634348 Q6ZUG5 572 aa12.6□□□□□ -0.39
SRSF4-208ENST00000634348 POLR3CQ9BUI4 534 aaPredicted RBP12.6□□□□□ -0.39
SRSF4-208ENST00000634348 ZBBXA8MT70 800 aa12.6□□□□□ -0.39
SRSF4-208ENST00000634348 HNRNPCL2B2RXH8 293 aa12.6□□□□□ -0.39
SRSF4-208ENST00000634348 ZBTB43O43298 467 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms