RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 CFHR5Q9BXR6 569 aa22.59■■□□□ 1.21
PNKP-224ENST00000631020 TMEM39BQ9GZU3 492 aa22.59■■□□□ 1.21
PNKP-224ENST00000631020 MANSC4A6NHS7 340 aaPredicted RBP22.58■■□□□ 1.21
PNKP-224ENST00000631020 MECOMQ03112 1051 aa22.58■■□□□ 1.21
PNKP-224ENST00000631020 TTC22Q5TAA0 569 aa22.58■■□□□ 1.21
PNKP-224ENST00000631020 HOOK2Q96ED9 719 aa22.58■■□□□ 1.21
PNKP-224ENST00000631020 WNK4Q96J92 1243 aa22.58■■□□□ 1.21
PNKP-224ENST00000631020 GSPT1P15170 499 aaKnown RBP22.57■■□□□ 1.2
PNKP-224ENST00000631020 NSUN4Q96CB9 384 aaKnown RBP22.57■■□□□ 1.2
PNKP-224ENST00000631020 CLMNQ96JQ2 1002 aa22.57■■□□□ 1.2
PNKP-224ENST00000631020 RAI14Q9P0K7 980 aa22.57■■□□□ 1.2
PNKP-224ENST00000631020 IDH1O75874 414 aaKnown RBP22.57■■□□□ 1.2
PNKP-224ENST00000631020 ALDH1A1P00352 501 aa22.57■■□□□ 1.2
PNKP-224ENST00000631020 DIXDC1Q155Q3 683 aa22.57■■□□□ 1.2
PNKP-224ENST00000631020 DAGLAQ9Y4D2 1042 aa22.57■■□□□ 1.2
PNKP-224ENST00000631020 MYH2Q9UKX2 1941 aa22.56■■□□□ 1.2
PNKP-224ENST00000631020 KBTBD3Q8NAB2 608 aa22.56■■□□□ 1.2
PNKP-224ENST00000631020 CHGBP05060 677 aa22.55■■□□□ 1.2
PNKP-224ENST00000631020 MKRN3Q13064 507 aaKnown RBP22.55■■□□□ 1.2
PNKP-224ENST00000631020 DZIP1Q86YF9 867 aaKnown RBP22.55■■□□□ 1.2
PNKP-224ENST00000631020 CDAN1Q8IWY9 1227 aa22.55■■□□□ 1.2
PNKP-224ENST00000631020 EVI5LQ96CN4 794 aa22.55■■□□□ 1.2
PNKP-224ENST00000631020 MCOLN1Q9GZU1 580 aa22.55■■□□□ 1.2
PNKP-224ENST00000631020 DOCK2Q92608 1830 aa22.54■■□□□ 1.2
PNKP-224ENST00000631020 CACNB3P54284 484 aa22.54■■□□□ 1.2
PNKP-224ENST00000631020 MAP3K12Q12852 859 aa22.54■■□□□ 1.2
PNKP-224ENST00000631020 SLFNL1Q499Z3 407 aa22.54■■□□□ 1.2
PNKP-224ENST00000631020 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.54■■□□□ 1.23e-6■■■■■ 38.3
PNKP-224ENST00000631020 TRIM6-TRIM34B2RNG4 842 aa22.53■■□□□ 1.2
PNKP-224ENST00000631020 DGKZQ13574 1117 aa22.53■■□□□ 1.2
PNKP-224ENST00000631020 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.53■■□□□ 1.2
PNKP-224ENST00000631020 SLF2Q8IX21 1173 aa22.53■■□□□ 1.2
PNKP-224ENST00000631020 MAGEB6Q8N7X4 407 aa22.53■■□□□ 1.2
PNKP-224ENST00000631020 FAM151AQ8WW52 585 aa22.53■■□□□ 1.2
PNKP-224ENST00000631020 GAKO14976 1311 aa22.53■■□□□ 1.2
PNKP-224ENST00000631020 PDE6AP16499 860 aa22.52■■□□□ 1.2
PNKP-224ENST00000631020 MAP3K9P80192 1104 aa22.52■■□□□ 1.2
PNKP-224ENST00000631020 SLC9C2Q5TAH2 1124 aa22.52■■□□□ 1.2
PNKP-224ENST00000631020 CDC42EP5Q6NZY7 148 aa22.52■■□□□ 1.2
PNKP-224ENST00000631020 ADGRA1Q86SQ6 560 aa22.52■■□□□ 1.2
PNKP-224ENST00000631020 RILPL2Q969X0 211 aa22.52■■□□□ 1.2
PNKP-224ENST00000631020 FAM163AQ96GL9 167 aaPredicted RBP22.52■■□□□ 1.2
PNKP-224ENST00000631020 TCRBV5S4A2TA0A5A2 114 aa22.52■■□□□ 1.19
PNKP-224ENST00000631020 IGSF3O75054 1194 aa22.52■■□□□ 1.19
PNKP-224ENST00000631020 SDSP20132 328 aa22.52■■□□□ 1.19
PNKP-224ENST00000631020 DCAF15Q66K64 600 aa22.52■■□□□ 1.19
PNKP-224ENST00000631020 NAA16Q6N069 864 aaPredicted RBP22.52■■□□□ 1.19
PNKP-224ENST00000631020 IFNL1Q8IU54 200 aa22.52■■□□□ 1.19
PNKP-224ENST00000631020 CSADQ9Y600 493 aa22.52■■□□□ 1.19
PNKP-224ENST00000631020 TESPA1A2RU30 521 aaPredicted RBP22.51■■□□□ 1.19
PNKP-224ENST00000631020 ADD2P35612 726 aa22.51■■□□□ 1.19
PNKP-224ENST00000631020 VGLL4Q14135 290 aa22.51■■□□□ 1.19
PNKP-224ENST00000631020 FSD1Q9BTV5 496 aa22.51■■□□□ 1.19
PNKP-224ENST00000631020 TBC1D8O95759 1140 aa22.5■■□□□ 1.19
PNKP-224ENST00000631020 CYP7A1P22680 504 aa22.5■■□□□ 1.19
PNKP-224ENST00000631020 GJA5P36382 358 aa22.5■■□□□ 1.19
PNKP-224ENST00000631020 CTU1Q7Z7A3 348 aaKnown RBP22.5■■□□□ 1.19
PNKP-224ENST00000631020 OPTNQ96CV9 577 aa22.5■■□□□ 1.19
PNKP-224ENST00000631020 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.5■■□□□ 1.192e-7■■■■■ 30.6
PNKP-224ENST00000631020 ZNF532Q9HCE3 1301 aa22.49■■□□□ 1.19
PNKP-224ENST00000631020 GPR25O00155 361 aa22.49■■□□□ 1.19
PNKP-224ENST00000631020 GSTO1P78417 241 aa22.49■■□□□ 1.19
PNKP-224ENST00000631020 OTUD7BQ6GQQ9 843 aa22.49■■□□□ 1.19
PNKP-224ENST00000631020 ELP3Q9H9T3 547 aa22.49■■□□□ 1.19
PNKP-224ENST00000631020 AK9Q5TCS8 1911 aa22.49■■□□□ 1.19
PNKP-224ENST00000631020 MROH7-TTC4A0A0A0MT08 1334 aa22.49■■□□□ 1.19
PNKP-224ENST00000631020 LDHCP07864 332 aa22.48■■□□□ 1.19
PNKP-224ENST00000631020 ZNF296Q8WUU4 475 aaPredicted RBP22.48■■□□□ 1.19
PNKP-224ENST00000631020 IDI2Q9BXS1 227 aa22.48■■□□□ 1.19
PNKP-224ENST00000631020 USP40Q9NVE5 1235 aa22.48■■□□□ 1.19
PNKP-224ENST00000631020 GPR75-ASB3A0A0A6YYF3 556 aa22.47■■□□□ 1.19
PNKP-224ENST00000631020 IGF2BP3O00425 579 aaKnown RBP eCLIP22.47■■□□□ 1.19
PNKP-224ENST00000631020 RNF113AO15541 343 aaKnown RBP22.47■■□□□ 1.19
PNKP-224ENST00000631020 UBE3CQ15386 1083 aa22.47■■□□□ 1.19
PNKP-224ENST00000631020 BMP2KLQ5H9B9 411 aa22.47■■□□□ 1.19
PNKP-224ENST00000631020 FAM198AQ9UFP1 575 aa22.47■■□□□ 1.19
PNKP-224ENST00000631020 RFX7Q2KHR2 1363 aa22.47■■□□□ 1.19
PNKP-224ENST00000631020 SPDYE5A6NIY4 337 aa22.47■■□□□ 1.19
PNKP-224ENST00000631020 ENTPD3O75355 529 aa22.47■■□□□ 1.19
PNKP-224ENST00000631020 NFIAQ12857 509 aa22.47■■□□□ 1.19
PNKP-224ENST00000631020 PKN2Q16513 984 aaKnown RBP22.47■■□□□ 1.19
PNKP-224ENST00000631020 ZSCAN25Q6NSZ9 544 aa22.47■■□□□ 1.19
PNKP-224ENST00000631020 TMED8Q6PL24 325 aaPredicted RBP22.47■■□□□ 1.19
PNKP-224ENST00000631020 MS4A4AQ96JQ5 239 aa22.47■■□□□ 1.19
PNKP-224ENST00000631020 WRNIP1Q96S55 665 aa22.47■■□□□ 1.19
PNKP-224ENST00000631020 ZNF341Q9BYN7 854 aa22.47■■□□□ 1.19
PNKP-224ENST00000631020 MAST2Q6P0Q8 1798 aa22.46■■□□□ 1.19
PNKP-224ENST00000631020 BTDP43251 543 aa22.46■■□□□ 1.19
PNKP-224ENST00000631020 GTF2A2P52657 109 aa22.46■■□□□ 1.19
PNKP-224ENST00000631020 ERO1BQ86YB8 467 aa22.46■■□□□ 1.19
PNKP-224ENST00000631020 MIGA1Q8NAN2 632 aa22.46■■□□□ 1.19
PNKP-224ENST00000631020 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.46■■□□□ 1.19
PNKP-224ENST00000631020 SNCAIPQ9Y6H5 919 aa22.46■■□□□ 1.19
PNKP-224ENST00000631020 MYH7P12883 1935 aa22.45■■□□□ 1.18
PNKP-224ENST00000631020 FKTNO75072 461 aa22.45■■□□□ 1.18
PNKP-224ENST00000631020 ZFYP08048 801 aaPredicted RBP22.45■■□□□ 1.18
PNKP-224ENST00000631020 AATFQ9NY61 560 aaKnown RBP eCLIP22.45■■□□□ 1.18
PNKP-224ENST00000631020 ZNF112Q9UJU3 913 aa22.45■■□□□ 1.18
PNKP-224ENST00000631020 CCDC85CA6NKD9 419 aa22.44■■□□□ 1.18
PNKP-224ENST00000631020 RHBDL3P58872 404 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms