RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 DLGAP5Q15398 846 aa11.86□□□□□ -0.51
SOX2-OT-249ENST00000628810 SLFNL1Q499Z3 407 aa11.86□□□□□ -0.51
SOX2-OT-249ENST00000628810 SAMD7Q7Z3H4 446 aa11.86□□□□□ -0.51
SOX2-OT-249ENST00000628810 OSBP2Q969R2 916 aa11.86□□□□□ -0.51
SOX2-OT-249ENST00000628810 PRMT6Q96LA8 375 aaPredicted RBP11.86□□□□□ -0.51
SOX2-OT-249ENST00000628810 PUS7LQ9H0K6 701 aaKnown RBP11.86□□□□□ -0.51
SOX2-OT-249ENST00000628810 PCDH10Q9P2E7 1040 aa11.86□□□□□ -0.51
SOX2-OT-249ENST00000628810 PCDHAC2Q9Y5I4 1007 aa11.86□□□□□ -0.51
SOX2-OT-249ENST00000628810 CDK5RAP2Q96SN8 1893 aa11.86□□□□□ -0.51
SOX2-OT-249ENST00000628810 PITPNM2Q9BZ72 1349 aa11.86□□□□□ -0.51
SOX2-OT-249ENST00000628810 COL2A1P02458 1487 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-249ENST00000628810 M0R2C6 588 aa11.85□□□□□ -0.51
SOX2-OT-249ENST00000628810 SNPHO15079 494 aa11.85□□□□□ -0.51
SOX2-OT-249ENST00000628810 BAG3O95817 575 aa11.85□□□□□ -0.51
SOX2-OT-249ENST00000628810 VEGFAP15692 232 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-249ENST00000628810 HIRAP54198 1017 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-249ENST00000628810 NMIQ13287 307 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-249ENST00000628810 TBC1D10BQ4KMP7 808 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-249ENST00000628810 FKBP1CQ5VVH2 108 aa11.85□□□□□ -0.51
SOX2-OT-249ENST00000628810 PNMA8AQ86V59 439 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-249ENST00000628810 FAM227BQ96M60 508 aa11.85□□□□□ -0.51
SOX2-OT-249ENST00000628810 DIAPH3Q9NSV4 1193 aa11.85□□□□□ -0.51
SOX2-OT-249ENST00000628810 AATFQ9NY61 560 aaKnown RBP eCLIP11.85□□□□□ -0.51
SOX2-OT-249ENST00000628810 PGAP2Q9UHJ9 254 aa11.85□□□□□ -0.51
SOX2-OT-249ENST00000628810 MAGEB6P1A0A0J9YX57 407 aa11.84□□□□□ -0.51
SOX2-OT-249ENST00000628810 GPAA1O43292 621 aa11.84□□□□□ -0.51
SOX2-OT-249ENST00000628810 MBD4O95243 580 aa11.84□□□□□ -0.51
SOX2-OT-249ENST00000628810 RBM5P52756 815 aaKnown RBP eCLIP11.84□□□□□ -0.51
SOX2-OT-249ENST00000628810 NBPF9Q3BBW0 867 aa11.84□□□□□ -0.51
SOX2-OT-249ENST00000628810 MCMDC2Q4G0Z9 681 aa11.84□□□□□ -0.51
SOX2-OT-249ENST00000628810 CDC42EP5Q6NZY7 148 aa11.84□□□□□ -0.51
SOX2-OT-249ENST00000628810 LCORLQ8N3X6 602 aa11.84□□□□□ -0.51
SOX2-OT-249ENST00000628810 MIGA1Q8NAN2 632 aa11.84□□□□□ -0.51
SOX2-OT-249ENST00000628810 ZC3H15Q8WU90 426 aaKnown RBP11.84□□□□□ -0.51
SOX2-OT-249ENST00000628810 RNF25Q96BH1 459 aaPredicted RBP11.84□□□□□ -0.51
SOX2-OT-249ENST00000628810 NOL10Q9BSC4 688 aaKnown RBP11.84□□□□□ -0.51
SOX2-OT-249ENST00000628810 IDI2Q9BXS1 227 aa11.84□□□□□ -0.51
SOX2-OT-249ENST00000628810 NMRK2Q9NPI5 230 aa11.84□□□□□ -0.51
SOX2-OT-249ENST00000628810 NAV1Q8NEY1 1877 aa11.84□□□□□ -0.51
SOX2-OT-249ENST00000628810 CCDC171Q6TFL3 1326 aa11.84□□□□□ -0.51
SOX2-OT-249ENST00000628810 RPAP1Q9BWH6 1393 aaPredicted RBP11.83□□□□□ -0.52
SOX2-OT-249ENST00000628810 SGSM2O43147 1006 aa11.83□□□□□ -0.52
SOX2-OT-249ENST00000628810 MYO1BO43795 1136 aa11.83□□□□□ -0.52
SOX2-OT-249ENST00000628810 WDHD1O75717 1129 aaPredicted RBP11.83□□□□□ -0.52
SOX2-OT-249ENST00000628810 DYNLL1P63167 89 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-249ENST00000628810 CWC27Q6UX04 472 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-249ENST00000628810 ZNF589Q86UQ0 364 aaPredicted RBP11.83□□□□□ -0.52
SOX2-OT-249ENST00000628810 SH3RF3Q8TEJ3 882 aaPredicted RBP11.83□□□□□ -0.52
SOX2-OT-249ENST00000628810 RUFY2Q8WXA3 655 aa11.83□□□□□ -0.52
SOX2-OT-249ENST00000628810 AIDAQ96BJ3 306 aa11.83□□□□□ -0.52
SOX2-OT-249ENST00000628810 STRBPQ96SI9 672 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-249ENST00000628810 SEC62Q99442 399 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-249ENST00000628810 IL25Q9H293 177 aa11.83□□□□□ -0.52
SOX2-OT-249ENST00000628810 TDRD3Q9H7E2 651 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-249ENST00000628810 RRAGCQ9HB90 399 aa11.83□□□□□ -0.52
SOX2-OT-249ENST00000628810 ZNF70Q9UC06 446 aaPredicted RBP11.83□□□□□ -0.52
SOX2-OT-249ENST00000628810 MKRN1Q9UHC7 482 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-249ENST00000628810 ZMYM6O95789 1325 aa11.83□□□□□ -0.52
SOX2-OT-249ENST00000628810 ATRNL1Q5VV63 1379 aa11.82□□□□□ -0.52
SOX2-OT-249ENST00000628810 FOXP2O15409 715 aa11.82□□□□□ -0.52
SOX2-OT-249ENST00000628810 GNAT2P19087 354 aa11.82□□□□□ -0.52
SOX2-OT-249ENST00000628810 MFAP1P55081 439 aaKnown RBP11.82□□□□□ -0.52
SOX2-OT-249ENST00000628810 CASC1Q6TDU7 716 aa11.82□□□□□ -0.52
SOX2-OT-249ENST00000628810 EFCAB3Q8N7B9 438 aa11.82□□□□□ -0.52
SOX2-OT-249ENST00000628810 ESYT1Q9BSJ8 1104 aa11.82□□□□□ -0.52
SOX2-OT-249ENST00000628810 CRNKL1Q9BZJ0 848 aaKnown RBP11.82□□□□□ -0.52
SOX2-OT-249ENST00000628810 ARMT1Q9H993 441 aa11.82□□□□□ -0.52
SOX2-OT-249ENST00000628810 USP40Q9NVE5 1235 aa11.82□□□□□ -0.52
SOX2-OT-249ENST00000628810 GGA3Q9NZ52 723 aa11.82□□□□□ -0.52
SOX2-OT-249ENST00000628810 ASTN2O75129 1339 aaPredicted RBP11.82□□□□□ -0.52
SOX2-OT-249ENST00000628810 FLT1P17948 1338 aa11.82□□□□□ -0.52
SOX2-OT-249ENST00000628810 LAMB1P07942 1786 aa11.82□□□□□ -0.52
SOX2-OT-249ENST00000628810 CNTNAP1P78357 1384 aa11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 CLRN2A0PK11 232 aa11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 YY1P25490 414 aa11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 TNFAIP1Q13829 316 aa11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 RBM26Q5T8P6 1007 aaKnown RBP11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 LCE2DQ5TA82 110 aaPredicted RBP11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 GIMAP6Q6P9H5 292 aa11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 CCDC129Q6ZRS4 1044 aa11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 FAM83AQ86UY5 434 aa11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 LDHDQ86WU2 507 aa11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 APOBEC3FQ8IUX4 373 aaKnown RBP11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 TEX11Q8IYF3 940 aa11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 ZFP91Q96JP5 570 aaPredicted RBP11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 GPBP1L1Q9HC44 474 aaPredicted RBP11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 ATP8A2Q9NTI2 1148 aa11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 TMOD2Q9NZR1 351 aa11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 FAM198AQ9UFP1 575 aa11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 PPP2R3BQ9Y5P8 575 aa11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 LAMA4Q16363 1823 aa11.81□□□□□ -0.52
SOX2-OT-249ENST00000628810 GSG1L2A8MUP6 293 aa11.8□□□□□ -0.52
SOX2-OT-249ENST00000628810 KIF3CO14782 793 aa11.8□□□□□ -0.52
SOX2-OT-249ENST00000628810 ENTPD3O75355 529 aa11.8□□□□□ -0.52
SOX2-OT-249ENST00000628810 NFIAQ12857 509 aa11.8□□□□□ -0.52
SOX2-OT-249ENST00000628810 ANGEL2Q5VTE6 544 aaKnown RBP11.8□□□□□ -0.52
SOX2-OT-249ENST00000628810 ZNF526Q8TF50 670 aaPredicted RBP11.8□□□□□ -0.52
SOX2-OT-249ENST00000628810 EPB41L4AQ9HCS5 686 aaPredicted RBP11.8□□□□□ -0.52
SOX2-OT-249ENST00000628810 DDX4Q9NQI0 724 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms