RNA–Protein interactions for RNA: ENST00000627515.2

ACAA1-220, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 5 BASIC

Gene ACAA1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-220ENST00000627515 ORC3Q9UBD5 711 aaPredicted RBP29.27■■■□□ 2.28
ACAA1-220ENST00000627515 MICU3Q86XE3 530 aa29.27■■■□□ 2.28
ACAA1-220ENST00000627515 PANK2Q9BZ23 570 aa29.27■■■□□ 2.28
ACAA1-220ENST00000627515 CCDC69A6NI79 296 aa29.26■■■□□ 2.27
ACAA1-220ENST00000627515 CDKL5O76039 1030 aa29.26■■■□□ 2.27
ACAA1-220ENST00000627515 LRSAM1Q6UWE0 723 aa29.26■■■□□ 2.27
ACAA1-220ENST00000627515 SPATA32Q96LK8 384 aa29.26■■■□□ 2.27
ACAA1-220ENST00000627515 TPRNQ4KMQ1 711 aa29.25■■■□□ 2.27
ACAA1-220ENST00000627515 TFIP11Q9UBB9 837 aaKnown RBP29.25■■■□□ 2.27
ACAA1-220ENST00000627515 SLC12A7Q9Y666 1083 aa29.25■■■□□ 2.27
ACAA1-220ENST00000627515 ERICH2A1L162 156 aa29.25■■■□□ 2.27
ACAA1-220ENST00000627515 PPEF1O14829 653 aaPredicted RBP29.25■■■□□ 2.27
ACAA1-220ENST00000627515 COL11A2P13942 1736 aaPredicted RBP29.25■■■□□ 2.27
ACAA1-220ENST00000627515 RXRAP19793 462 aa29.25■■■□□ 2.27
ACAA1-220ENST00000627515 ESR2Q92731 530 aa29.25■■■□□ 2.27
ACAA1-220ENST00000627515 CD209Q9NNX6 404 aa29.25■■■□□ 2.27
ACAA1-220ENST00000627515 GUCY1B3Q02153 619 aa29.24■■■□□ 2.27
ACAA1-220ENST00000627515 WTAPQ15007 396 aa29.24■■■□□ 2.27
ACAA1-220ENST00000627515 CCDC183Q5T5S1 534 aa29.24■■■□□ 2.27
ACAA1-220ENST00000627515 CTR9Q6PD62 1173 aa29.24■■■□□ 2.27
ACAA1-220ENST00000627515 CPLX2Q6PUV4 134 aaKnown RBP29.24■■■□□ 2.27
ACAA1-220ENST00000627515 TBC1D16Q8TBP0 767 aa29.24■■■□□ 2.27
ACAA1-220ENST00000627515 ATP8A2Q9NTI2 1148 aa29.24■■■□□ 2.27
ACAA1-220ENST00000627515 GOLGA8AA7E2F4 631 aa29.23■■■□□ 2.27
ACAA1-220ENST00000627515 PCP11498 1178 aaKnown RBP29.23■■■□□ 2.27
ACAA1-220ENST00000627515 ADD1P35611 737 aaKnown RBP29.23■■■□□ 2.27
ACAA1-220ENST00000627515 LEO1Q8WVC0 666 aaPredicted RBP29.23■■■□□ 2.27
ACAA1-220ENST00000627515 C8orf76Q96K31 380 aa29.23■■■□□ 2.27
ACAA1-220ENST00000627515 ZKSCAN3Q9BRR0 538 aa29.23■■■□□ 2.27
ACAA1-220ENST00000627515 DCP1AQ9NPI6 582 aaPredicted RBP29.23■■■□□ 2.27
ACAA1-220ENST00000627515 POLLQ9UGP5 575 aa29.23■■■□□ 2.27
ACAA1-220ENST00000627515 CYP2D7A0A087X1C5 515 aa29.23■■■□□ 2.27
ACAA1-220ENST00000627515 IL1R1P14778 569 aa29.23■■■□□ 2.27
ACAA1-220ENST00000627515 CDC27P30260 824 aa29.23■■■□□ 2.27
ACAA1-220ENST00000627515 GSTO1P78417 241 aa29.23■■■□□ 2.27
ACAA1-220ENST00000627515 SYNE3Q6ZMZ3 975 aa29.23■■■□□ 2.27
ACAA1-220ENST00000627515 CFAP45Q9UL16 551 aa29.23■■■□□ 2.27
ACAA1-220ENST00000627515 NID2Q14112 1375 aa29.23■■■□□ 2.27
ACAA1-220ENST00000627515 SMIM22K7EJ46 135 aa29.22■■■□□ 2.27
ACAA1-220ENST00000627515 MMP10P09238 476 aa29.22■■■□□ 2.27
ACAA1-220ENST00000627515 SP8Q8IXZ3 490 aa29.22■■■□□ 2.27
ACAA1-220ENST00000627515 UBAC1Q9BSL1 405 aa29.22■■■□□ 2.27
ACAA1-220ENST00000627515 PARP3Q9Y6F1 533 aa29.22■■■□□ 2.27
ACAA1-220ENST00000627515 DLEC1Q9Y238 1755 aa29.22■■■□□ 2.27
ACAA1-220ENST00000627515 USP17L12C9JPN9 530 aa29.21■■■□□ 2.27
ACAA1-220ENST00000627515 USP17L21D6R901 530 aa29.21■■■□□ 2.27
ACAA1-220ENST00000627515 CCDC144CPQ8IYA2 1237 aa29.21■■■□□ 2.27
ACAA1-220ENST00000627515 TMTC2Q8N394 836 aa29.21■■■□□ 2.27
ACAA1-220ENST00000627515 MYL10Q9BUA6 226 aa29.21■■■□□ 2.27
ACAA1-220ENST00000627515 SRGNP10124 158 aa29.21■■■□□ 2.27
ACAA1-220ENST00000627515 NPR1P16066 1061 aa29.21■■■□□ 2.27
ACAA1-220ENST00000627515 FGRP09769 529 aa29.2■■■□□ 2.26
ACAA1-220ENST00000627515 FBXO18Q8NFZ0 1043 aa29.2■■■□□ 2.26
ACAA1-220ENST00000627515 ARPP21Q9UBL0 812 aaPredicted RBP29.2■■■□□ 2.26
ACAA1-220ENST00000627515 ATP6V0A2Q9Y487 856 aa29.2■■■□□ 2.26
ACAA1-220ENST00000627515 NAV1Q8NEY1 1877 aa29.2■■■□□ 2.26
ACAA1-220ENST00000627515 C6orf229H3BNL8 230 aa29.19■■■□□ 2.26
ACAA1-220ENST00000627515 RGS22Q8NE09 1264 aa29.19■■■□□ 2.26
ACAA1-220ENST00000627515 FAM217BQ9NTX9 383 aaPredicted RBP29.19■■■□□ 2.26
ACAA1-220ENST00000627515 CDK5RAP2Q96SN8 1893 aa29.19■■■□□ 2.26
ACAA1-220ENST00000627515 PDE6BP35913 854 aa29.19■■■□□ 2.26
ACAA1-220ENST00000627515 GRIK5Q16478 980 aa29.19■■■□□ 2.26
ACAA1-220ENST00000627515 ATL3Q6DD88 541 aa29.19■■■□□ 2.26
ACAA1-220ENST00000627515 NASPP49321 788 aaPredicted RBP29.18■■■□□ 2.26
ACAA1-220ENST00000627515 NTRK3Q16288 839 aa29.18■■■□□ 2.26
ACAA1-220ENST00000627515 TNKSO95271 1327 aa29.18■■■□□ 2.26
ACAA1-220ENST00000627515 GOLGA6L4A6NEF3 574 aa29.17■■■□□ 2.26
ACAA1-220ENST00000627515 RCAN1P53805 252 aa29.17■■■□□ 2.26
ACAA1-220ENST00000627515 DIXDC1Q155Q3 683 aa29.17■■■□□ 2.26
ACAA1-220ENST00000627515 SBK1Q52WX2 424 aa29.17■■■□□ 2.26
ACAA1-220ENST00000627515 OTUD7BQ6GQQ9 843 aa29.17■■■□□ 2.26
ACAA1-220ENST00000627515 ZNF396Q96N95 335 aaPredicted RBP29.17■■■□□ 2.26
ACAA1-220ENST00000627515 LETM1O95202 739 aaPredicted RBP29.17■■■□□ 2.26
ACAA1-220ENST00000627515 LDHCP07864 332 aa29.17■■■□□ 2.26
ACAA1-220ENST00000627515 MSL1Q68DK7 614 aa29.17■■■□□ 2.26
ACAA1-220ENST00000627515 ILDR1Q86SU0 546 aaPredicted RBP29.17■■■□□ 2.26
ACAA1-220ENST00000627515 PHKBQ93100 1093 aa29.17■■■□□ 2.26
ACAA1-220ENST00000627515 NOL10Q9BSC4 688 aaKnown RBP29.17■■■□□ 2.26
ACAA1-220ENST00000627515 BAG3O95817 575 aa29.16■■■□□ 2.26
ACAA1-220ENST00000627515 SLC3A2P08195 630 aaKnown RBP29.16■■■□□ 2.26
ACAA1-220ENST00000627515 IARSP41252 1262 aaKnown RBP29.16■■■□□ 2.26
ACAA1-220ENST00000627515 SEC23AQ15436 765 aa29.16■■■□□ 2.26
ACAA1-220ENST00000627515 RBSNQ9H1K0 784 aa29.16■■■□□ 2.26
ACAA1-220ENST00000627515 RGS17Q9UGC6 210 aaPredicted RBP29.16■■■□□ 2.26
ACAA1-220ENST00000627515 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.16■■■□□ 2.26
ACAA1-220ENST00000627515 MROH7-TTC4A0A0A0MT08 1334 aa29.16■■■□□ 2.26
ACAA1-220ENST00000627515 RANBP6O60518 1105 aaKnown RBP29.15■■■□□ 2.26
ACAA1-220ENST00000627515 ALDH1B1P30837 517 aa29.15■■■□□ 2.26
ACAA1-220ENST00000627515 RTN1Q16799 776 aa29.15■■■□□ 2.26
ACAA1-220ENST00000627515 ZSCAN10Q96SZ4 725 aaPredicted RBP29.15■■■□□ 2.26
ACAA1-220ENST00000627515 ALG1Q9BT22 464 aa29.15■■■□□ 2.26
ACAA1-220ENST00000627515 STK36Q9NRP7 1315 aa29.15■■■□□ 2.26
ACAA1-220ENST00000627515 ORC4O43929 436 aa29.14■■■□□ 2.26
ACAA1-220ENST00000627515 PRDM1O75626 825 aa29.14■■■□□ 2.26
ACAA1-220ENST00000627515 ZNF654Q8IZM8 581 aa29.14■■■□□ 2.26
ACAA1-220ENST00000627515 TSPY26PQ9H489 355 aa29.14■■■□□ 2.26
ACAA1-220ENST00000627515 MYH6P13533 1939 aa29.14■■■□□ 2.26
ACAA1-220ENST00000627515 USP5P45974 858 aa29.14■■■□□ 2.26
ACAA1-220ENST00000627515 PPP4CP60510 307 aa29.14■■■□□ 2.26
ACAA1-220ENST00000627515 IQCA1Q86XH1 822 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms