RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 NSUN4Q96CB9 384 aaKnown RBP17.81■□□□□ 0.44
PNKP-221ENST00000627317 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.81■□□□□ 0.442e-7■■■■■ 34.8
PNKP-221ENST00000627317 LAMB1P07942 1786 aa17.81■□□□□ 0.44
PNKP-221ENST00000627317 MROH7-TTC4A0A0A0MT08 1334 aa17.8■□□□□ 0.44
PNKP-221ENST00000627317 TNNI2P48788 182 aa17.8■□□□□ 0.44
PNKP-221ENST00000627317 SPRYD7Q5W111 196 aa17.8■□□□□ 0.44
PNKP-221ENST00000627317 REM2Q8IYK8 340 aaPredicted RBP17.8■□□□□ 0.44
PNKP-221ENST00000627317 MAGEB6Q8N7X4 407 aa17.8■□□□□ 0.44
PNKP-221ENST00000627317 FAM163AQ96GL9 167 aaPredicted RBP17.8■□□□□ 0.44
PNKP-221ENST00000627317 RNF186Q9NXI6 227 aa17.8■□□□□ 0.44
PNKP-221ENST00000627317 TRIM6-TRIM34B2RNG4 842 aa17.79■□□□□ 0.44
PNKP-221ENST00000627317 NFIAQ12857 509 aa17.79■□□□□ 0.44
PNKP-221ENST00000627317 TNS4Q8IZW8 715 aa17.79■□□□□ 0.44
PNKP-221ENST00000627317 KBTBD3Q8NAB2 608 aa17.79■□□□□ 0.44
PNKP-221ENST00000627317 NOL10Q9BSC4 688 aaKnown RBP17.79■□□□□ 0.44
PNKP-221ENST00000627317 FSD1Q9BTV5 496 aa17.79■□□□□ 0.44
PNKP-221ENST00000627317 FAM198AQ9UFP1 575 aa17.79■□□□□ 0.44
PNKP-221ENST00000627317 ATRNL1Q5VV63 1379 aa17.79■□□□□ 0.44
PNKP-221ENST00000627317 PDE6AP16499 860 aa17.78■□□□□ 0.44
PNKP-221ENST00000627317 CYP7A1P22680 504 aa17.78■□□□□ 0.44
PNKP-221ENST00000627317 IREB2P48200 963 aaKnown RBP17.78■□□□□ 0.44
PNKP-221ENST00000627317 LRRFIP1Q32MZ4 808 aaKnown RBP17.78■□□□□ 0.44
PNKP-221ENST00000627317 SLC9C2Q5TAH2 1124 aa17.78■□□□□ 0.44
PNKP-221ENST00000627317 ZSCAN25Q6NSZ9 544 aa17.78■□□□□ 0.44
PNKP-221ENST00000627317 TMED8Q6PL24 325 aaPredicted RBP17.78■□□□□ 0.44
PNKP-221ENST00000627317 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.78■□□□□ 0.44
PNKP-221ENST00000627317 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.78■□□□□ 0.44
PNKP-221ENST00000627317 TMOD2Q9NZR1 351 aa17.78■□□□□ 0.44
PNKP-221ENST00000627317 MYH7P12883 1935 aa17.78■□□□□ 0.44
PNKP-221ENST00000627317 GJA5P36382 358 aa17.77■□□□□ 0.44
PNKP-221ENST00000627317 BTDP43251 543 aa17.77■□□□□ 0.44
PNKP-221ENST00000627317 TM4SF4P48230 202 aa17.77■□□□□ 0.44
PNKP-221ENST00000627317 RGS3P49796 1198 aa17.77■□□□□ 0.44
PNKP-221ENST00000627317 TTC22Q5TAA0 569 aa17.77■□□□□ 0.44
PNKP-221ENST00000627317 FAM151AQ8WW52 585 aa17.77■□□□□ 0.44
PNKP-221ENST00000627317 EVI5LQ96CN4 794 aa17.77■□□□□ 0.44
PNKP-221ENST00000627317 WNK4Q96J92 1243 aa17.77■□□□□ 0.44
PNKP-221ENST00000627317 ZBTB48P10074 688 aaPredicted RBP17.76■□□□□ 0.43
PNKP-221ENST00000627317 MKRN3Q13064 507 aaKnown RBP17.76■□□□□ 0.43
PNKP-221ENST00000627317 SKAP1Q86WV1 359 aa17.76■□□□□ 0.43
PNKP-221ENST00000627317 ANKRD13AQ8IZ07 590 aa17.76■□□□□ 0.43
PNKP-221ENST00000627317 RILPL2Q969X0 211 aa17.76■□□□□ 0.43
PNKP-221ENST00000627317 IDI2Q9BXS1 227 aa17.76■□□□□ 0.43
PNKP-221ENST00000627317 ZNF532Q9HCE3 1301 aa17.75■□□□□ 0.43
PNKP-221ENST00000627317 GPR75-ASB3A0A0A6YYF3 556 aa17.75■□□□□ 0.43
PNKP-221ENST00000627317 WDHD1O75717 1129 aaPredicted RBP17.75■□□□□ 0.43
PNKP-221ENST00000627317 TRPA1O75762 1119 aa17.75■□□□□ 0.43
PNKP-221ENST00000627317 BAG3O95817 575 aa17.75■□□□□ 0.43
PNKP-221ENST00000627317 ZFYP08048 801 aaPredicted RBP17.75■□□□□ 0.43
PNKP-221ENST00000627317 ADD2P35612 726 aa17.75■□□□□ 0.43
PNKP-221ENST00000627317 RHBDL3P58872 404 aa17.75■□□□□ 0.43
PNKP-221ENST00000627317 VGLL4Q14135 290 aa17.75■□□□□ 0.43
PNKP-221ENST00000627317 ZFPM1Q8IX07 1006 aa17.75■□□□□ 0.43
PNKP-221ENST00000627317 SLC10A4Q96EP9 437 aa17.75■□□□□ 0.43
PNKP-221ENST00000627317 USP40Q9NVE5 1235 aa17.75■□□□□ 0.43
PNKP-221ENST00000627317 ADGRA1Q86SQ6 560 aa17.74■□□□□ 0.43
PNKP-221ENST00000627317 MIGA1Q8NAN2 632 aa17.74■□□□□ 0.43
PNKP-221ENST00000627317 CFHR5Q9BXR6 569 aa17.74■□□□□ 0.43
PNKP-221ENST00000627317 AATFQ9NY61 560 aaKnown RBP eCLIP17.74■□□□□ 0.43
PNKP-221ENST00000627317 GTF3C3Q9Y5Q9 886 aa17.74■□□□□ 0.43
PNKP-221ENST00000627317 AK9Q5TCS8 1911 aa17.74■□□□□ 0.43
PNKP-221ENST00000627317 TCRBV5S4A2TA0A5A2 114 aa17.73■□□□□ 0.43
PNKP-221ENST00000627317 RNF113AO15541 343 aaKnown RBP17.73■□□□□ 0.43
PNKP-221ENST00000627317 GSPT1P15170 499 aaKnown RBP17.73■□□□□ 0.43
PNKP-221ENST00000627317 PLCG2P16885 1265 aa17.73■□□□□ 0.43
PNKP-221ENST00000627317 SREBF2Q12772 1141 aa17.73■□□□□ 0.43
PNKP-221ENST00000627317 TCP10Q12799 353 aa17.73■□□□□ 0.43
PNKP-221ENST00000627317 UBE3CQ15386 1083 aa17.73■□□□□ 0.43
PNKP-221ENST00000627317 SH3BP5LQ7L8J4 393 aa17.73■□□□□ 0.43
PNKP-221ENST00000627317 CERS3Q8IU89 383 aa17.73■□□□□ 0.43
PNKP-221ENST00000627317 DDX4Q9NQI0 724 aaKnown RBP17.73■□□□□ 0.43
PNKP-221ENST00000627317 SNCAIPQ9Y6H5 919 aa17.73■□□□□ 0.43
PNKP-221ENST00000627317 ENTPD3O75355 529 aa17.72■□□□□ 0.43
PNKP-221ENST00000627317 MAP3K9P80192 1104 aa17.72■□□□□ 0.43
PNKP-221ENST00000627317 TEX11Q8IYF3 940 aa17.72■□□□□ 0.43
PNKP-221ENST00000627317 CNKSR2Q8WXI2 1034 aa17.72■□□□□ 0.43
PNKP-221ENST00000627317 HOOK2Q96ED9 719 aa17.72■□□□□ 0.43
PNKP-221ENST00000627317 ELP3Q9H9T3 547 aa17.72■□□□□ 0.43
PNKP-221ENST00000627317 ZNF112Q9UJU3 913 aa17.72■□□□□ 0.43
PNKP-221ENST00000627317 COL2A1P02458 1487 aaPredicted RBP17.71■□□□□ 0.43
PNKP-221ENST00000627317 MAGEB6P1A0A0J9YX57 407 aa17.71■□□□□ 0.43
PNKP-221ENST00000627317 TESPA1A2RU30 521 aaPredicted RBP17.71■□□□□ 0.43
PNKP-221ENST00000627317 MANSC4A6NHS7 340 aaPredicted RBP17.71■□□□□ 0.43
PNKP-221ENST00000627317 NPM3O75607 178 aaKnown RBP17.71■□□□□ 0.43
PNKP-221ENST00000627317 SDSP20132 328 aa17.71■□□□□ 0.43
PNKP-221ENST00000627317 PPP4CP60510 307 aa17.71■□□□□ 0.43
PNKP-221ENST00000627317 DYNLL1P63167 89 aaKnown RBP17.71■□□□□ 0.43
PNKP-221ENST00000627317 SLFNL1Q499Z3 407 aa17.71■□□□□ 0.43
PNKP-221ENST00000627317 SH3RF3Q8TEJ3 882 aaPredicted RBP17.71■□□□□ 0.43
PNKP-221ENST00000627317 APPBP2Q92624 585 aa17.71■□□□□ 0.43
PNKP-221ENST00000627317 OPTNQ96CV9 577 aa17.71■□□□□ 0.43
PNKP-221ENST00000627317 MS4A4AQ96JQ5 239 aa17.71■□□□□ 0.43
PNKP-221ENST00000627317 WRNIP1Q96S55 665 aa17.71■□□□□ 0.43
PNKP-221ENST00000627317 SPDYE5A6NIY4 337 aa17.7■□□□□ 0.42
PNKP-221ENST00000627317 IGF2BP3O00425 579 aaKnown RBP eCLIP17.7■□□□□ 0.42
PNKP-221ENST00000627317 MBD4O95243 580 aa17.7■□□□□ 0.42
PNKP-221ENST00000627317 CHGBP05060 677 aa17.7■□□□□ 0.42
PNKP-221ENST00000627317 MAP3K10Q02779 954 aa17.7■□□□□ 0.42
PNKP-221ENST00000627317 NOM1Q5C9Z4 860 aaKnown RBP17.7■□□□□ 0.42
PNKP-221ENST00000627317 DCAF15Q66K64 600 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms