RNA–Protein interactions for RNA: ENST00000626782.2

CHD2-207, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 2,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-207ENST00000626782 SGMS1Q86VZ5 419 aa12.11□□□□□ -0.47
CHD2-207ENST00000626782 DZIP1Q86YF9 867 aaKnown RBP12.11□□□□□ -0.47
CHD2-207ENST00000626782 TMEM87AQ8NBN3 555 aa12.11□□□□□ -0.47
CHD2-207ENST00000626782 MASTLQ96GX5 879 aa12.11□□□□□ -0.47
CHD2-207ENST00000626782 ZKSCAN3Q9BRR0 538 aa12.11□□□□□ -0.47
CHD2-207ENST00000626782 DLEC1Q9Y238 1755 aa12.11□□□□□ -0.47
CHD2-207ENST00000626782 NAV1Q8NEY1 1877 aa12.11□□□□□ -0.47
CHD2-207ENST00000626782 USP17L12C9JPN9 530 aa12.11□□□□□ -0.47
CHD2-207ENST00000626782 USP17L21D6R901 530 aa12.11□□□□□ -0.47
CHD2-207ENST00000626782 RIMBP2O15034 1052 aa12.11□□□□□ -0.47
CHD2-207ENST00000626782 CYP2D6P10635 497 aa12.11□□□□□ -0.47
CHD2-207ENST00000626782 PDCP20941 246 aa12.11□□□□□ -0.47
CHD2-207ENST00000626782 RRP12Q5JTH9 1297 aaKnown RBP12.11□□□□□ -0.47
CHD2-207ENST00000626782 SPTY2D1Q68D10 685 aaPredicted RBP12.11□□□□□ -0.47
CHD2-207ENST00000626782 TMEM87BQ96K49 555 aa12.11□□□□□ -0.47
CHD2-207ENST00000626782 SNED1Q8TER0 1413 aa12.11□□□□□ -0.47
CHD2-207ENST00000626782 FGRP09769 529 aa12.1□□□□□ -0.47
CHD2-207ENST00000626782 CDC27P30260 824 aa12.1□□□□□ -0.47
CHD2-207ENST00000626782 GIMAP6Q6P9H5 292 aa12.1□□□□□ -0.47
CHD2-207ENST00000626782 MYL10Q9BUA6 226 aa12.1□□□□□ -0.47
CHD2-207ENST00000626782 RTFDC1Q9BY42 306 aaPredicted RBP12.1□□□□□ -0.47
CHD2-207ENST00000626782 KRT23Q9C075 422 aa12.1□□□□□ -0.47
CHD2-207ENST00000626782 CNNM2Q9H8M5 875 aa12.1□□□□□ -0.47
CHD2-207ENST00000626782 FAM217BQ9NTX9 383 aaPredicted RBP12.1□□□□□ -0.47
CHD2-207ENST00000626782 RBM27Q9P2N5 1060 aaKnown RBP12.1□□□□□ -0.47
CHD2-207ENST00000626782 FSD2A1L4K1 749 aa12.1□□□□□ -0.47
CHD2-207ENST00000626782 H0YIN7 160 aa12.1□□□□□ -0.47
CHD2-207ENST00000626782 ALDH1B1P30837 517 aa12.1□□□□□ -0.47
CHD2-207ENST00000626782 ADD1P35611 737 aaKnown RBP12.1□□□□□ -0.47
CHD2-207ENST00000626782 LIFRP42702 1097 aa12.1□□□□□ -0.47
CHD2-207ENST00000626782 FOSBP53539 338 aa12.1□□□□□ -0.47
CHD2-207ENST00000626782 RESTQ13127 1097 aa12.1□□□□□ -0.47
CHD2-207ENST00000626782 TMEM67Q5HYA8 995 aa12.1□□□□□ -0.47
CHD2-207ENST00000626782 SH3RF3Q8TEJ3 882 aaPredicted RBP12.1□□□□□ -0.47
CHD2-207ENST00000626782 SLC16A10Q8TF71 515 aa12.1□□□□□ -0.47
CHD2-207ENST00000626782 CRNKL1Q9BZJ0 848 aaKnown RBP12.1□□□□□ -0.47
CHD2-207ENST00000626782 SCN9AQ15858 1988 aa12.09□□□□□ -0.47
CHD2-207ENST00000626782 PRDM1O75626 825 aa12.09□□□□□ -0.47
CHD2-207ENST00000626782 DPEP1P16444 411 aa12.09□□□□□ -0.47
CHD2-207ENST00000626782 HMGN5P82970 282 aaKnown RBP12.09□□□□□ -0.47
CHD2-207ENST00000626782 MFSD14BQ5SR56 506 aa12.09□□□□□ -0.47
CHD2-207ENST00000626782 TMED8Q6PL24 325 aaPredicted RBP12.09□□□□□ -0.47
CHD2-207ENST00000626782 GAS2L3Q86XJ1 694 aa12.09□□□□□ -0.47
CHD2-207ENST00000626782 MPNDQ8N594 471 aa12.09□□□□□ -0.47
CHD2-207ENST00000626782 CERS5Q8N5B7 392 aa12.09□□□□□ -0.47
CHD2-207ENST00000626782 ATP8A2Q9NTI2 1148 aa12.09□□□□□ -0.47
CHD2-207ENST00000626782 GJB4Q9NTQ9 266 aa12.09□□□□□ -0.47
CHD2-207ENST00000626782 TMEM63CQ9P1W3 806 aa12.09□□□□□ -0.47
CHD2-207ENST00000626782 PPP1R1BQ9UD71 204 aaPredicted RBP12.09□□□□□ -0.47
CHD2-207ENST00000626782 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.09□□□□□ -0.47
CHD2-207ENST00000626782 MROH7-TTC4A0A0A0MT08 1334 aa12.09□□□□□ -0.47
CHD2-207ENST00000626782 FAM205AQ6ZU69 1335 aa12.09□□□□□ -0.47
CHD2-207ENST00000626782 C10orf71Q711Q0 1435 aa12.09□□□□□ -0.47
CHD2-207ENST00000626782 FOCADQ5VW36 1801 aa12.09□□□□□ -0.47
CHD2-207ENST00000626782 IFIT3O14879 490 aaKnown RBP12.08□□□□□ -0.47
CHD2-207ENST00000626782 FIBPO43427 364 aa12.08□□□□□ -0.47
CHD2-207ENST00000626782 USP17L8P0C7I0 530 aa12.08□□□□□ -0.47
CHD2-207ENST00000626782 KCNA3P22001 575 aa12.08□□□□□ -0.47
CHD2-207ENST00000626782 PPP4CP60510 307 aa12.08□□□□□ -0.47
CHD2-207ENST00000626782 SEC23AQ15436 765 aa12.08□□□□□ -0.47
CHD2-207ENST00000626782 NTRK3Q16288 839 aa12.08□□□□□ -0.47
CHD2-207ENST00000626782 SLC4A8Q2Y0W8 1093 aa12.08□□□□□ -0.47
CHD2-207ENST00000626782 CAVIN1Q6NZI2 390 aaKnown RBP12.08□□□□□ -0.47
CHD2-207ENST00000626782 MICU3Q86XE3 530 aa12.08□□□□□ -0.47
CHD2-207ENST00000626782 CCDC144CPQ8IYA2 1237 aa12.08□□□□□ -0.47
CHD2-207ENST00000626782 KLHL34Q8N239 644 aa12.08□□□□□ -0.47
CHD2-207ENST00000626782 MTFR1LQ9H019 292 aa12.08□□□□□ -0.47
CHD2-207ENST00000626782 TOMM22Q9NS69 142 aa12.08□□□□□ -0.47
CHD2-207ENST00000626782 NID2Q14112 1375 aa12.08□□□□□ -0.48
CHD2-207ENST00000626782 UBE2Q2LH0YL09 131 aa12.08□□□□□ -0.48
CHD2-207ENST00000626782 GTF2IP78347 998 aa12.08□□□□□ -0.48
CHD2-207ENST00000626782 DPP8Q6V1X1 898 aaPredicted RBP12.08□□□□□ -0.48
CHD2-207ENST00000626782 MXD3Q9BW11 206 aa12.08□□□□□ -0.48
CHD2-207ENST00000626782 RNF41Q9H4P4 317 aaPredicted RBP12.08□□□□□ -0.48
CHD2-207ENST00000626782 RANBP6O60518 1105 aaKnown RBP12.07□□□□□ -0.48
CHD2-207ENST00000626782 PDIA4P13667 645 aaKnown RBP12.07□□□□□ -0.48
CHD2-207ENST00000626782 METAP2P50579 478 aaKnown RBP eCLIP12.07□□□□□ -0.48
CHD2-207ENST00000626782 GUCY1B3Q02153 619 aa12.07□□□□□ -0.48
CHD2-207ENST00000626782 DOK7Q18PE1 504 aa12.07□□□□□ -0.48
CHD2-207ENST00000626782 SBK1Q52WX2 424 aa12.07□□□□□ -0.48
CHD2-207ENST00000626782 STYK1Q6J9G0 422 aa12.07□□□□□ -0.48
CHD2-207ENST00000626782 FAM184AQ8NB25 1140 aa12.07□□□□□ -0.48
CHD2-207ENST00000626782 C7orf43Q8WVR3 580 aa12.07□□□□□ -0.48
CHD2-207ENST00000626782 SGIP1Q9BQI5 828 aa12.07□□□□□ -0.48
CHD2-207ENST00000626782 GAKO14976 1311 aa12.07□□□□□ -0.48
CHD2-207ENST00000626782 ZBTB43O43298 467 aa12.07□□□□□ -0.48
CHD2-207ENST00000626782 IGSF3O75054 1194 aa12.07□□□□□ -0.48
CHD2-207ENST00000626782 NCLP19338 710 aaKnown RBP12.07□□□□□ -0.48
CHD2-207ENST00000626782 PTGER2P43116 358 aa12.07□□□□□ -0.48
CHD2-207ENST00000626782 RHBDL3P58872 404 aa12.07□□□□□ -0.48
CHD2-207ENST00000626782 ZSCAN23Q3MJ62 389 aa12.07□□□□□ -0.48
CHD2-207ENST00000626782 OTUD7BQ6GQQ9 843 aa12.07□□□□□ -0.48
CHD2-207ENST00000626782 TTC6Q86TZ1 520 aa12.07□□□□□ -0.48
CHD2-207ENST00000626782 ENAHQ8N8S7 591 aaPredicted RBP12.07□□□□□ -0.48
CHD2-207ENST00000626782 AIFM3Q96NN9 605 aa12.07□□□□□ -0.48
CHD2-207ENST00000626782 COA1Q9GZY4 146 aa12.07□□□□□ -0.48
CHD2-207ENST00000626782 KCNQ5Q9NR82 932 aa12.07□□□□□ -0.48
CHD2-207ENST00000626782 ATP6V1DQ9Y5K8 247 aa12.07□□□□□ -0.48
CHD2-207ENST00000626782 TNKSO95271 1327 aa12.06□□□□□ -0.48
CHD2-207ENST00000626782 GPR75-ASB3A0A0A6YYF3 556 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms