RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 NKX2-3Q8TAU0 364 aa13.29□□□□□ -0.28
TCF4-253ENST00000626466 USP44Q9H0E7 712 aa13.29□□□□□ -0.28
TCF4-253ENST00000626466 A0A0G2JLL6 359 aaPredicted RBP13.28□□□□□ -0.28
TCF4-253ENST00000626466 EYA2O00167 538 aa13.28□□□□□ -0.28
TCF4-253ENST00000626466 ADCY3O60266 1144 aa13.28□□□□□ -0.28
TCF4-253ENST00000626466 INHAP05111 366 aa13.28□□□□□ -0.28
TCF4-253ENST00000626466 GADL1Q6ZQY3 521 aa13.28□□□□□ -0.28
TCF4-253ENST00000626466 PRRT2Q7Z6L0 340 aaPredicted RBP13.28□□□□□ -0.28
TCF4-253ENST00000626466 SLAIN1Q8ND83 568 aa13.28□□□□□ -0.28
TCF4-253ENST00000626466 WDR66Q8TBY9 1149 aa13.28□□□□□ -0.28
TCF4-253ENST00000626466 DIS3LQ8TF46 1054 aaKnown RBP13.28□□□□□ -0.28
TCF4-253ENST00000626466 HTATIP2Q9BUP3 242 aa13.28□□□□□ -0.28
TCF4-253ENST00000626466 USP40Q9NVE5 1235 aa13.28□□□□□ -0.28
TCF4-253ENST00000626466 CXCL11O14625 94 aa13.27□□□□□ -0.29
TCF4-253ENST00000626466 SGPL1O95470 568 aa13.27□□□□□ -0.29
TCF4-253ENST00000626466 SLC5A1P13866 664 aa13.27□□□□□ -0.29
TCF4-253ENST00000626466 PTPRAP18433 802 aa13.27□□□□□ -0.29
TCF4-253ENST00000626466 PHKA1P46020 1223 aa13.27□□□□□ -0.29
TCF4-253ENST00000626466 RGS3P49796 1198 aa13.27□□□□□ -0.29
TCF4-253ENST00000626466 UBXN2AP68543 259 aa13.27□□□□□ -0.29
TCF4-253ENST00000626466 SCYL3Q8IZE3 742 aa13.27□□□□□ -0.29
TCF4-253ENST00000626466 LPIN2Q92539 896 aa13.27□□□□□ -0.29
TCF4-253ENST00000626466 DEFB118Q96PH6 123 aa13.27□□□□□ -0.29
TCF4-253ENST00000626466 DDX4Q9NQI0 724 aaKnown RBP13.27□□□□□ -0.29
TCF4-253ENST00000626466 ZHX2Q9Y6X8 837 aa13.27□□□□□ -0.29
TCF4-253ENST00000626466 DDTLA6NHG4 134 aaPredicted RBP13.26□□□□□ -0.29
TCF4-253ENST00000626466 MGAMO43451 1857 aa13.26□□□□□ -0.29
TCF4-253ENST00000626466 ADORA1P30542 326 aa13.26□□□□□ -0.29
TCF4-253ENST00000626466 DOCK2Q92608 1830 aa13.26□□□□□ -0.29
TCF4-253ENST00000626466 ZNF521Q96K83 1311 aa13.26□□□□□ -0.29
TCF4-253ENST00000626466 SIL1Q9H173 461 aa13.26□□□□□ -0.29
TCF4-253ENST00000626466 STAP2Q9UGK3 403 aa13.26□□□□□ -0.29
TCF4-253ENST00000626466 AFG3L2Q9Y4W6 797 aa13.26□□□□□ -0.29
TCF4-253ENST00000626466 MYH13Q9UKX3 1938 aa13.25□□□□□ -0.29
TCF4-253ENST00000626466 FAM196BA6NMK8 535 aa13.25□□□□□ -0.29
TCF4-253ENST00000626466 LDHBP07195 334 aaKnown RBP13.25□□□□□ -0.29
TCF4-253ENST00000626466 ZEB1P37275 1124 aaPredicted RBP13.25□□□□□ -0.29
TCF4-253ENST00000626466 ATP2B3Q16720 1220 aa13.25□□□□□ -0.29
TCF4-253ENST00000626466 TREML2Q5T2D2 321 aa13.25□□□□□ -0.29
TCF4-253ENST00000626466 SSH1Q8WYL5 1049 aa13.25□□□□□ -0.29
TCF4-253ENST00000626466 TAOK2Q9UL54 1235 aa13.25□□□□□ -0.29
TCF4-253ENST00000626466 NR2E3Q9Y5X4 410 aa13.25□□□□□ -0.29
TCF4-253ENST00000626466 CEP290O15078 2479 aa13.25□□□□□ -0.29
TCF4-253ENST00000626466 SZT2Q5T011 3432 aa13.24□□□□□ -0.29
TCF4-253ENST00000626466 GAKO14976 1311 aa13.24□□□□□ -0.29
TCF4-253ENST00000626466 SALL1Q9NSC2 1324 aa13.24□□□□□ -0.29
TCF4-253ENST00000626466 ALPK3Q96L96 1907 aa13.24□□□□□ -0.29
TCF4-253ENST00000626466 TRIM75PA6NK02 468 aa13.24□□□□□ -0.29
TCF4-253ENST00000626466 DLL1O00548 723 aa13.24□□□□□ -0.29
TCF4-253ENST00000626466 TNPO2O14787 897 aaKnown RBP13.24□□□□□ -0.29
TCF4-253ENST00000626466 TRIM32Q13049 653 aa13.24□□□□□ -0.29
TCF4-253ENST00000626466 SLC17A8Q8NDX2 589 aa13.24□□□□□ -0.29
TCF4-253ENST00000626466 IDI2Q9BXS1 227 aa13.24□□□□□ -0.29
TCF4-253ENST00000626466 PAK6Q9NQU5 681 aaPredicted RBP13.24□□□□□ -0.29
TCF4-253ENST00000626466 PICK1Q9NRD5 415 aa13.24□□□□□ -0.29
TCF4-253ENST00000626466 PA2G4Q9UQ80 394 aaKnown RBP13.24□□□□□ -0.29
TCF4-253ENST00000626466 PHIPQ8WWQ0 1821 aa13.23□□□□□ -0.29
TCF4-253ENST00000626466 EVI5O60447 810 aa13.23□□□□□ -0.29
TCF4-253ENST00000626466 TFRCP02786 760 aaKnown RBP13.23□□□□□ -0.29
TCF4-253ENST00000626466 PICALMQ13492 652 aa13.23□□□□□ -0.29
TCF4-253ENST00000626466 FASTKD5Q7L8L6 764 aaKnown RBP13.23□□□□□ -0.29
TCF4-253ENST00000626466 ZSCAN29Q8IWY8 852 aaPredicted RBP13.23□□□□□ -0.29
TCF4-253ENST00000626466 ANKRD13CQ8N6S4 541 aa13.23□□□□□ -0.29
TCF4-253ENST00000626466 ZNF384Q8TF68 577 aa13.23□□□□□ -0.29
TCF4-253ENST00000626466 PAWRQ96IZ0 340 aaKnown RBP13.23□□□□□ -0.29
TCF4-253ENST00000626466 CRISPLD2Q9H0B8 497 aa13.23□□□□□ -0.29
TCF4-253ENST00000626466 ZMYND8Q9ULU4 1186 aaPredicted RBP13.23□□□□□ -0.29
TCF4-253ENST00000626466 PTPRFP10586 1907 aa13.23□□□□□ -0.29
TCF4-253ENST00000626466 DOCK1Q14185 1865 aa13.23□□□□□ -0.29
TCF4-253ENST00000626466 PTPRCP08575 1304 aa13.22□□□□□ -0.29
TCF4-253ENST00000626466 ENTPD3O75355 529 aa13.22□□□□□ -0.29
TCF4-253ENST00000626466 MAP3K10Q02779 954 aa13.22□□□□□ -0.29
TCF4-253ENST00000626466 IRF5Q13568 498 aa13.22□□□□□ -0.29
TCF4-253ENST00000626466 RASGRF1Q13972 1273 aa13.22□□□□□ -0.29
TCF4-253ENST00000626466 RRP1BQ14684 758 aaKnown RBP13.22□□□□□ -0.29
TCF4-253ENST00000626466 C7orf61Q8IZ16 206 aa13.22□□□□□ -0.29
TCF4-253ENST00000626466 FAM9BQ8IZU0 186 aa13.22□□□□□ -0.29
TCF4-253ENST00000626466 PXYLP1Q8TE99 480 aa13.22□□□□□ -0.29
TCF4-253ENST00000626466 SMCR8Q8TEV9 937 aaPredicted RBP13.22□□□□□ -0.29
TCF4-253ENST00000626466 AGTPBP1Q9UPW5 1226 aa13.22□□□□□ -0.29
TCF4-253ENST00000626466 SLC45A1Q9Y2W3 748 aa13.22□□□□□ -0.29
TCF4-253ENST00000626466 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.22□□□□□ -0.29
TCF4-253ENST00000626466 AK9Q5TCS8 1911 aa13.21□□□□□ -0.29
TCF4-253ENST00000626466 PEX10O60683 326 aa13.21□□□□□ -0.29
TCF4-253ENST00000626466 BTDP43251 543 aa13.21□□□□□ -0.29
TCF4-253ENST00000626466 MNX1P50219 401 aaPredicted RBP13.21□□□□□ -0.29
TCF4-253ENST00000626466 CCDC102BQ68D86 513 aa13.21□□□□□ -0.29
TCF4-253ENST00000626466 GDF15Q99988 308 aa13.21□□□□□ -0.29
TCF4-253ENST00000626466 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.21□□□□□ -0.29
TCF4-253ENST00000626466 DENND2AQ9ULE3 1009 aa13.21□□□□□ -0.29
TCF4-253ENST00000626466 RANBP2P49792 3224 aaKnown RBP13.2□□□□□ -0.3
TCF4-253ENST00000626466 A0A1W2PPC1 479 aa13.2□□□□□ -0.3
TCF4-253ENST00000626466 CIAO1O76071 339 aa13.2□□□□□ -0.3
TCF4-253ENST00000626466 SYN1P17600 705 aa13.2□□□□□ -0.3
TCF4-253ENST00000626466 VASPP50552 380 aaPredicted RBP13.2□□□□□ -0.3
TCF4-253ENST00000626466 RHBDL3P58872 404 aa13.2□□□□□ -0.3
TCF4-253ENST00000626466 Q7L0L9 218 aa13.2□□□□□ -0.3
TCF4-253ENST00000626466 CEP126Q9P2H0 1117 aa13.2□□□□□ -0.3
TCF4-253ENST00000626466 LRRFIP2Q9Y608 721 aaKnown RBP13.2□□□□□ -0.3
TCF4-253ENST00000626466 CTNND1O60716 968 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms