RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 DEXIO95424 95 aa13.34□□□□□ -0.27
CHD2-205ENST00000625662 CNGA1P29973 690 aa13.34□□□□□ -0.27
CHD2-205ENST00000625662 ICA1Q05084 483 aa13.34□□□□□ -0.27
CHD2-205ENST00000625662 KRT25Q7Z3Z0 450 aa13.34□□□□□ -0.27
CHD2-205ENST00000625662 C21orf2O43822 256 aa13.33□□□□□ -0.27
CHD2-205ENST00000625662 PPP1R2P41236 205 aa13.33□□□□□ -0.27
CHD2-205ENST00000625662 ATP8A2Q9NTI2 1148 aa13.33□□□□□ -0.27
CHD2-205ENST00000625662 SRP68Q9UHB9 627 aaKnown RBP13.33□□□□□ -0.27
CHD2-205ENST00000625662 PSDA5PKW4 1024 aaPredicted RBP13.33□□□□□ -0.28
CHD2-205ENST00000625662 MYCLP12524 364 aaPredicted RBP13.33□□□□□ -0.28
CHD2-205ENST00000625662 TSHZ3Q63HK5 1081 aa13.33□□□□□ -0.28
CHD2-205ENST00000625662 TBC1D5Q92609 795 aa13.33□□□□□ -0.28
CHD2-205ENST00000625662 BSDC1Q9NW68 430 aaPredicted RBP13.33□□□□□ -0.28
CHD2-205ENST00000625662 SETD1BQ9UPS6 1966 aaKnown RBP13.33□□□□□ -0.28
CHD2-205ENST00000625662 CDC42BPBQ9Y5S2 1711 aa13.33□□□□□ -0.28
CHD2-205ENST00000625662 SCNN1DP51172 638 aa13.33□□□□□ -0.28
CHD2-205ENST00000625662 RSPH3Q86UC2 560 aa13.33□□□□□ -0.28
CHD2-205ENST00000625662 SSH2Q76I76 1423 aa13.33□□□□□ -0.28
CHD2-205ENST00000625662 KCNQ3O43525 872 aa13.33□□□□□ -0.28
CHD2-205ENST00000625662 GYG1P46976 350 aa13.33□□□□□ -0.28
CHD2-205ENST00000625662 FCHSD1Q86WN1 690 aa13.33□□□□□ -0.28
CHD2-205ENST00000625662 ANKRD35Q8N283 1001 aa13.33□□□□□ -0.28
CHD2-205ENST00000625662 FSIP1Q8NA03 581 aa13.33□□□□□ -0.28
CHD2-205ENST00000625662 SOS2Q07890 1332 aaPredicted RBP13.33□□□□□ -0.28
CHD2-205ENST00000625662 CDC37L1Q7L3B6 337 aa13.32□□□□□ -0.28
CHD2-205ENST00000625662 BRAPQ7Z569 592 aa13.32□□□□□ -0.28
CHD2-205ENST00000625662 CEP152O94986 1710 aa13.32□□□□□ -0.28
CHD2-205ENST00000625662 CREB3L3Q68CJ9 461 aa13.32□□□□□ -0.28
CHD2-205ENST00000625662 CSRNP1Q96S65 589 aa13.32□□□□□ -0.28
CHD2-205ENST00000625662 DBNDD1Q9H9R9 158 aa13.32□□□□□ -0.28
CHD2-205ENST00000625662 TRPM1Q7Z4N2 1603 aa13.32□□□□□ -0.28
CHD2-205ENST00000625662 TRAK2O60296 914 aa13.32□□□□□ -0.28
CHD2-205ENST00000625662 ZAP70P43403 619 aa13.32□□□□□ -0.28
CHD2-205ENST00000625662 CNPY2Q9Y2B0 182 aa13.32□□□□□ -0.28
CHD2-205ENST00000625662 ABCA6Q8N139 1617 aa13.32□□□□□ -0.28
CHD2-205ENST00000625662 ZBTB24O43167 697 aaPredicted RBP13.32□□□□□ -0.28
CHD2-205ENST00000625662 RAD17O75943 681 aa13.32□□□□□ -0.28
CHD2-205ENST00000625662 SLC8A3P57103 927 aa13.32□□□□□ -0.28
CHD2-205ENST00000625662 DTHD1Q6ZMT9 781 aa13.32□□□□□ -0.28
CHD2-205ENST00000625662 NCAPG2Q86XI2 1143 aa13.32□□□□□ -0.28
CHD2-205ENST00000625662 TRIM6Q9C030 488 aaPredicted RBP13.32□□□□□ -0.28
CHD2-205ENST00000625662 GPBP1L1Q9HC44 474 aaPredicted RBP13.32□□□□□ -0.28
CHD2-205ENST00000625662 MRE11P49959 708 aa13.31□□□□□ -0.28
CHD2-205ENST00000625662 KIAA1328Q86T90 577 aa13.31□□□□□ -0.28
CHD2-205ENST00000625662 BBXQ8WY36 941 aaPredicted RBP13.31□□□□□ -0.28
CHD2-205ENST00000625662 GREM2Q9H772 168 aa13.31□□□□□ -0.28
CHD2-205ENST00000625662 COPRSQ9NQ92 184 aa13.31□□□□□ -0.28
CHD2-205ENST00000625662 ZBTB7BO15156 539 aaPredicted RBP13.31□□□□□ -0.28
CHD2-205ENST00000625662 RRP9O43818 475 aaKnown RBP13.31□□□□□ -0.28
CHD2-205ENST00000625662 CAVIN2O95810 425 aa13.31□□□□□ -0.28
CHD2-205ENST00000625662 SPAG1Q07617 926 aa13.31□□□□□ -0.28
CHD2-205ENST00000625662 ZRSR2Q15696 482 aaKnown RBP13.31□□□□□ -0.28
CHD2-205ENST00000625662 SYNE4Q8N205 404 aa13.31□□□□□ -0.28
CHD2-205ENST00000625662 KIFC2Q96AC6 838 aa13.31□□□□□ -0.28
CHD2-205ENST00000625662 SYNCQ9H7C4 482 aa13.31□□□□□ -0.28
CHD2-205ENST00000625662 CLIP2Q9UDT6 1046 aa13.31□□□□□ -0.28
CHD2-205ENST00000625662 PDE4DQ08499 809 aa13.31□□□□□ -0.28
CHD2-205ENST00000625662 STRN3Q13033 797 aa13.31□□□□□ -0.28
CHD2-205ENST00000625662 BEND3Q5T5X7 828 aa13.31□□□□□ -0.28
CHD2-205ENST00000625662 CYP27B1O15528 508 aa13.31□□□□□ -0.28
CHD2-205ENST00000625662 FLOT1O75955 427 aa13.31□□□□□ -0.28
CHD2-205ENST00000625662 TFAP4Q01664 338 aa13.31□□□□□ -0.28
CHD2-205ENST00000625662 SP4Q02446 784 aa13.31□□□□□ -0.28
CHD2-205ENST00000625662 ELMSAN1Q6PJG2 1045 aa13.31□□□□□ -0.28
CHD2-205ENST00000625662 MLXIPQ9HAP2 919 aa13.31□□□□□ -0.28
CHD2-205ENST00000625662 IGSF3O75054 1194 aa13.3□□□□□ -0.28
CHD2-205ENST00000625662 NASPP49321 788 aaPredicted RBP13.3□□□□□ -0.28
CHD2-205ENST00000625662 KLHL10Q6JEL2 608 aa13.3□□□□□ -0.28
CHD2-205ENST00000625662 ARHGEF1Q92888 912 aaKnown RBP13.3□□□□□ -0.28
CHD2-205ENST00000625662 ZMYND15Q9H091 742 aa13.3□□□□□ -0.28
CHD2-205ENST00000625662 PUF60Q9UHX1 559 aaKnown RBP13.3□□□□□ -0.28
CHD2-205ENST00000625662 ANGEL1Q9UNK9 670 aaKnown RBP13.3□□□□□ -0.28
CHD2-205ENST00000625662 SETBP1Q9Y6X0 1596 aa13.3□□□□□ -0.28
CHD2-205ENST00000625662 RPL13P26373 211 aaKnown RBP13.3□□□□□ -0.28
CHD2-205ENST00000625662 SNX16P57768 344 aa13.3□□□□□ -0.28
CHD2-205ENST00000625662 CFAP100Q494V2 611 aa13.3□□□□□ -0.28
CHD2-205ENST00000625662 FAM47CQ5HY64 1035 aa13.3□□□□□ -0.28
CHD2-205ENST00000625662 TEX35Q5T0J7 233 aa13.3□□□□□ -0.28
CHD2-205ENST00000625662 SPOUT1Q5T280 376 aaKnown RBP13.3□□□□□ -0.28
CHD2-205ENST00000625662 RRAGBQ5VZM2 374 aa13.3□□□□□ -0.28
CHD2-205ENST00000625662 OTUD6AQ7L8S5 288 aa13.3□□□□□ -0.28
CHD2-205ENST00000625662 FOXP4Q8IVH2 680 aaPredicted RBP13.3□□□□□ -0.28
CHD2-205ENST00000625662 DSCC1Q9BVC3 393 aa13.3□□□□□ -0.28
CHD2-205ENST00000625662 PPARAQ07869 468 aa13.3□□□□□ -0.28
CHD2-205ENST00000625662 ARHGEF16Q5VV41 709 aa13.3□□□□□ -0.28
CHD2-205ENST00000625662 RAB11FIP4Q86YS3 637 aa13.3□□□□□ -0.28
CHD2-205ENST00000625662 ZNF341Q9BYN7 854 aa13.3□□□□□ -0.28
CHD2-205ENST00000625662 CROCC2H7BZ55 1655 aa13.3□□□□□ -0.28
CHD2-205ENST00000625662 PLCD1P51178 756 aa13.3□□□□□ -0.28
CHD2-205ENST00000625662 TTC12Q9H892 705 aaPredicted RBP13.3□□□□□ -0.28
CHD2-205ENST00000625662 PSMA7O14818 248 aa13.29□□□□□ -0.28
CHD2-205ENST00000625662 TOP1P11387 765 aaKnown RBP13.29□□□□□ -0.28
CHD2-205ENST00000625662 NFKBIBQ15653 356 aa13.29□□□□□ -0.28
CHD2-205ENST00000625662 ATL3Q6DD88 541 aa13.29□□□□□ -0.28
CHD2-205ENST00000625662 CCDC65Q8IXS2 484 aa13.29□□□□□ -0.28
CHD2-205ENST00000625662 RNF216Q9NWF9 866 aaPredicted RBP13.29□□□□□ -0.28
CHD2-205ENST00000625662 KDM4FA0A1W2PPD8 638 aa13.29□□□□□ -0.28
CHD2-205ENST00000625662 UBE3CQ15386 1083 aa13.29□□□□□ -0.28
CHD2-205ENST00000625662 KRT26Q7Z3Y9 468 aa13.29□□□□□ -0.28
CHD2-205ENST00000625662 RABGAP1Q9Y3P9 1069 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms