RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 ZNF777Q9ULD5 760 aaPredicted RBP5.46□□□□□ -1.54
CHD2-203ENST00000625243 ATG7O95352 703 aa5.45□□□□□ -1.54
CHD2-203ENST00000625243 ID3Q02535 119 aa5.45□□□□□ -1.54
CHD2-203ENST00000625243 AP3B2Q13367 1082 aa5.45□□□□□ -1.54
CHD2-203ENST00000625243 TMEM67Q5HYA8 995 aa5.45□□□□□ -1.54
CHD2-203ENST00000625243 KIRREL1Q96J84 757 aa5.45□□□□□ -1.54
CHD2-203ENST00000625243 DISC1Q9NRI5 854 aa5.45□□□□□ -1.54
CHD2-203ENST00000625243 JAG2Q9Y219 1238 aa5.45□□□□□ -1.54
CHD2-203ENST00000625243 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.44□□□□□ -1.54
CHD2-203ENST00000625243 PRKCSHP14314 528 aaPredicted RBP5.44□□□□□ -1.54
CHD2-203ENST00000625243 USP5P45974 858 aa5.44□□□□□ -1.54
CHD2-203ENST00000625243 TTLL4Q14679 1199 aa5.44□□□□□ -1.54
CHD2-203ENST00000625243 TOP6BLQ8N6T0 577 aa5.44□□□□□ -1.54
CHD2-203ENST00000625243 FBXO15Q8NCQ5 510 aaPredicted RBP5.44□□□□□ -1.54
CHD2-203ENST00000625243 DIRC2Q96SL1 478 aa5.44□□□□□ -1.54
CHD2-203ENST00000625243 ZC3H12CQ9C0D7 883 aaKnown RBP5.44□□□□□ -1.54
CHD2-203ENST00000625243 CCDC86Q9H6F5 360 aaKnown RBP5.44□□□□□ -1.54
CHD2-203ENST00000625243 PCOLCE2Q9UKZ9 415 aa5.44□□□□□ -1.54
CHD2-203ENST00000625243 TMEM253P0C7T8 217 aa5.43□□□□□ -1.54
CHD2-203ENST00000625243 HCLS1P14317 486 aaPredicted RBP5.43□□□□□ -1.54
CHD2-203ENST00000625243 SRPK2P78362 688 aaKnown RBP5.43□□□□□ -1.54
CHD2-203ENST00000625243 CYFIP1Q7L576 1253 aa5.43□□□□□ -1.54
CHD2-203ENST00000625243 GTF3C2Q8WUA4 911 aaPredicted RBP5.43□□□□□ -1.54
CHD2-203ENST00000625243 HEXIM2Q96MH2 286 aaKnown RBP5.43□□□□□ -1.54
CHD2-203ENST00000625243 ZNF576Q9H609 170 aa5.43□□□□□ -1.54
CHD2-203ENST00000625243 NSUN3Q9H649 340 aaKnown RBP5.43□□□□□ -1.54
CHD2-203ENST00000625243 KCNA10Q16322 511 aa5.42□□□□□ -1.54
CHD2-203ENST00000625243 CIAPIN1Q6FI81 312 aa5.42□□□□□ -1.54
CHD2-203ENST00000625243 GALNT12Q8IXK2 581 aa5.42□□□□□ -1.54
CHD2-203ENST00000625243 SSU72Q9NP77 194 aaKnown RBP5.42□□□□□ -1.54
CHD2-203ENST00000625243 ZNF862O60290 1169 aa5.41□□□□□ -1.54
CHD2-203ENST00000625243 HOXA5P20719 270 aa5.41□□□□□ -1.54
CHD2-203ENST00000625243 MTMR3Q13615 1198 aa5.41□□□□□ -1.54
CHD2-203ENST00000625243 KIF4BQ2VIQ3 1234 aa5.4□□□□□ -1.54
CHD2-203ENST00000625243 ATG14Q6ZNE5 492 aa5.4□□□□□ -1.54
CHD2-203ENST00000625243 FAM214BQ7L5A3 538 aa5.4□□□□□ -1.54
CHD2-203ENST00000625243 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.4□□□□□ -1.54
CHD2-203ENST00000625243 SPACA3Q8IXA5 215 aa5.4□□□□□ -1.54
CHD2-203ENST00000625243 RELTQ969Z4 430 aa5.4□□□□□ -1.54
CHD2-203ENST00000625243 C20orf173Q96LM9 149 aa5.4□□□□□ -1.54
CHD2-203ENST00000625243 KCNK12Q9HB15 430 aa5.4□□□□□ -1.54
CHD2-203ENST00000625243 CD320Q9NPF0 282 aa5.4□□□□□ -1.54
CHD2-203ENST00000625243 GTF2IRD1Q9UHL9 959 aa5.4□□□□□ -1.54
CHD2-203ENST00000625243 TCAF2A6NFQ2 919 aa5.39□□□□□ -1.55
CHD2-203ENST00000625243 NEFMP07197 916 aa5.39□□□□□ -1.55
CHD2-203ENST00000625243 ITPKAP23677 461 aa5.39□□□□□ -1.55
CHD2-203ENST00000625243 KIAA0319Q5VV43 1072 aa5.39□□□□□ -1.55
CHD2-203ENST00000625243 GJD3Q8N144 294 aa5.39□□□□□ -1.55
CHD2-203ENST00000625243 ISL2Q96A47 359 aa5.39□□□□□ -1.55
CHD2-203ENST00000625243 EHD4Q9H223 541 aa5.39□□□□□ -1.55
CHD2-203ENST00000625243 PCDHGC5Q9Y5F6 944 aa5.39□□□□□ -1.55
CHD2-203ENST00000625243 IGF2BP3O00425 579 aaKnown RBP eCLIP5.38□□□□□ -1.55
CHD2-203ENST00000625243 NUAK1O60285 661 aa5.38□□□□□ -1.55
CHD2-203ENST00000625243 FZD6O60353 706 aa5.38□□□□□ -1.55
CHD2-203ENST00000625243 ZNF157P51786 506 aaPredicted RBP5.38□□□□□ -1.55
CHD2-203ENST00000625243 HNRNPUQ00839 825 aaKnown RBP eCLIP5.38□□□□□ -1.55
CHD2-203ENST00000625243 NKPD1Q17RQ9 610 aa5.38□□□□□ -1.55
CHD2-203ENST00000625243 CARS2Q9HA77 564 aaKnown RBP5.38□□□□□ -1.55
CHD2-203ENST00000625243 DCP1AQ9NPI6 582 aaPredicted RBP5.38□□□□□ -1.55
CHD2-203ENST00000625243 SMG5Q9UPR3 1016 aaKnown RBP5.38□□□□□ -1.55
CHD2-203ENST00000625243 PITPNM2Q9BZ72 1349 aa5.38□□□□□ -1.55
CHD2-203ENST00000625243 FAM13AO94988 1023 aa5.37□□□□□ -1.55
CHD2-203ENST00000625243 GSTP1P09211 210 aaKnown RBP5.37□□□□□ -1.55
CHD2-203ENST00000625243 NPR3P17342 541 aa5.37□□□□□ -1.55
CHD2-203ENST00000625243 GDNFP39905 211 aa5.37□□□□□ -1.55
CHD2-203ENST00000625243 EPB41L4BQ9H329 900 aa5.37□□□□□ -1.55
CHD2-203ENST00000625243 KRT82Q9NSB4 513 aa5.37□□□□□ -1.55
CHD2-203ENST00000625243 CCDC87Q9NVE4 849 aa5.37□□□□□ -1.55
CHD2-203ENST00000625243 C19orf73Q9NVV2 129 aa5.37□□□□□ -1.55
CHD2-203ENST00000625243 GNAT3A8MTJ3 354 aa5.36□□□□□ -1.55
CHD2-203ENST00000625243 ETV2O00321 342 aaPredicted RBP5.36□□□□□ -1.55
CHD2-203ENST00000625243 MED14OSP0DP75 135 aa5.36□□□□□ -1.55
CHD2-203ENST00000625243 CLCN7P51798 805 aa5.36□□□□□ -1.55
CHD2-203ENST00000625243 PTPN12Q05209 780 aaKnown RBP5.36□□□□□ -1.55
CHD2-203ENST00000625243 USPL1Q5W0Q7 1092 aa5.36□□□□□ -1.55
CHD2-203ENST00000625243 CSRNP1Q96S65 589 aa5.36□□□□□ -1.55
CHD2-203ENST00000625243 PRDM10Q9NQV6 1147 aa5.36□□□□□ -1.55
CHD2-203ENST00000625243 RPS26P11Q5JNZ5 115 aaPredicted RBP5.35□□□□□ -1.55
CHD2-203ENST00000625243 KCNN1Q92952 543 aa5.35□□□□□ -1.55
CHD2-203ENST00000625243 KCNB2Q92953 911 aa5.35□□□□□ -1.55
CHD2-203ENST00000625243 IRF2BPLQ9H1B7 796 aa5.35□□□□□ -1.55
CHD2-203ENST00000625243 PARD6AQ9NPB6 346 aa5.35□□□□□ -1.55
CHD2-203ENST00000625243 FOXD2O60548 495 aaPredicted RBP5.34□□□□□ -1.55
CHD2-203ENST00000625243 GLDCP23378 1020 aa5.34□□□□□ -1.55
CHD2-203ENST00000625243 LINC00310P59036 64 aa5.34□□□□□ -1.55
CHD2-203ENST00000625243 FAAP100Q0VG06 881 aa5.34□□□□□ -1.55
CHD2-203ENST00000625243 DBX2Q6ZNG2 339 aa5.34□□□□□ -1.55
CHD2-203ENST00000625243 RNF214Q8ND24 703 aa5.34□□□□□ -1.55
CHD2-203ENST00000625243 ZCCHC4Q9H5U6 513 aa5.34□□□□□ -1.55
CHD2-203ENST00000625243 ATP13A1Q9HD20 1204 aa5.34□□□□□ -1.55
CHD2-203ENST00000625243 ZC3H12AQ5D1E8 599 aaKnown RBP5.33□□□□□ -1.56
CHD2-203ENST00000625243 NPAS4Q8IUM7 802 aa5.33□□□□□ -1.56
CHD2-203ENST00000625243 HSPA12BQ96MM6 686 aa5.33□□□□□ -1.56
CHD2-203ENST00000625243 ABCB6Q9NP58 842 aa5.33□□□□□ -1.56
CHD2-203ENST00000625243 BMP7P18075 431 aa5.32□□□□□ -1.56
CHD2-203ENST00000625243 ERVK-24P63145 666 aa5.32□□□□□ -1.56
CHD2-203ENST00000625243 ABHD4Q8TB40 342 aa5.32□□□□□ -1.56
CHD2-203ENST00000625243 CCDC120Q96HB5 630 aa5.32□□□□□ -1.56
CHD2-203ENST00000625243 SLC26A8Q96RN1 970 aa5.32□□□□□ -1.56
CHD2-203ENST00000625243 FOXQ1Q9C009 403 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms