RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 SLC39A14Q15043 492 aa9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 ANKRD18AQ8IVF6 992 aa9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 MTA3Q9BTC8 594 aa9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 MYL10Q9BUA6 226 aa9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 GNL3LQ9NVN8 582 aaKnown RBP9.65□□□□□ -0.86
SND1-IT1-201ENST00000623342 ZNF804BA4D1E1 1349 aa9.65□□□□□ -0.87
SND1-IT1-201ENST00000623342 ZNF831Q5JPB2 1677 aa9.65□□□□□ -0.87
SND1-IT1-201ENST00000623342 TOM1O60784 492 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 FMNL1O95466 1100 aaPredicted RBP9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 CYP7A1P22680 504 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 SSRP1Q08945 709 aaKnown RBP9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 SF3B3Q15393 1217 aaKnown RBP9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 ERFEQ4G0M1 354 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 AXDND1Q5T1B0 1012 aaPredicted RBP9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 DHX40Q8IX18 779 aaKnown RBP9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 MIGA1Q8NAN2 632 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 WASF1Q92558 559 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 RNF41Q9H4P4 317 aaPredicted RBP9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 KIAA1468Q9P260 1216 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 CLIP2Q9UDT6 1046 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 COL4A1P02462 1669 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 ERICH2A1L162 156 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 RRP9O43818 475 aaKnown RBP9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 PPP6R2O75170 966 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 ZNF202O95125 648 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 IFNAR1P17181 557 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 U2AF2P26368 475 aaKnown RBP eCLIP9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 UBE4AQ14139 1066 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 ZRSR1Q15695 479 aaKnown RBP9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 RRP12Q5JTH9 1297 aaKnown RBP9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 JMYQ8N9B5 988 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 LINC00116Q8NCU8 138 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 MRFAP1L1Q96HT8 127 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 PRIMPOLQ96LW4 560 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 SLC26A6Q9BXS9 759 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 TOMM22Q9NS69 142 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 BSDC1Q9NW68 430 aaPredicted RBP9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 NRBP1Q9UHY1 535 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 ECM29Q5VYK3 1845 aa9.64□□□□□ -0.87
SND1-IT1-201ENST00000623342 RGL2O15211 777 aa9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 PFKFB1P16118 471 aa9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 WTAPQ15007 396 aa9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 TMTC2Q8N394 836 aa9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 ERCC4Q92889 916 aaPredicted RBP9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 NGLY1Q96IV0 654 aa9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 ABCF2Q9UG63 623 aa9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 IQSEC3Q9UPP2 1182 aaPredicted RBP9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 A0A087WWV3 80 aa9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 MAGEB6P1A0A0J9YX57 407 aa9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 DYNC1I1O14576 645 aa9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 WDHD1O75717 1129 aaPredicted RBP9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 SLC3A2P08195 630 aaKnown RBP9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 MARCKSP29966 332 aaPredicted RBP9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 GYG1P46976 350 aa9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 PPARAQ07869 468 aa9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 CAVIN4Q5BKX8 364 aa9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 C3orf67Q6ZVT6 689 aa9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 RAI14Q9P0K7 980 aa9.63□□□□□ -0.87
SND1-IT1-201ENST00000623342 A0A1B0GUL6 1792 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 RCAN1P53805 252 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 RBM6P78332 1123 aaKnown RBP9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 HSP90AA2PQ14568 343 aaPredicted RBP9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 PTPAQ15257 358 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 RTN1Q16799 776 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 ADGRA1Q86SQ6 560 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 TRIM22Q8IYM9 498 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 AOPEPQ8N6M6 819 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 MYRIPQ8NFW9 859 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 TIGD1Q96MW7 591 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 MAP3K14Q99558 947 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 BPIFA3Q9BQP9 254 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 ZKSCAN3Q9BRR0 538 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 ANAPC4Q9UJX5 808 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 TAOK2Q9UL54 1235 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 MINPP1Q9UNW1 487 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 TAF1P21675 1872 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 CCDC196A0A1B0GTZ2 297 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 GTF2E1P29083 439 aaPredicted RBP9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 SLC10A5Q5PT55 438 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 POTEDQ86YR6 584 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 SDR42E1Q8WUS8 393 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 MROH7-TTC4A0A0A0MT08 1334 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 CNTNAP4Q9C0A0 1308 aa9.62□□□□□ -0.87
SND1-IT1-201ENST00000623342 COL1A1P02452 1464 aaPredicted RBP9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 FAM237AA0A1B0GTK4 181 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 MINDY4BA8MYZ0 360 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 MMP1P03956 469 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 SYKP43405 635 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 NLRP12P59046 1061 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 LRMPQ12912 555 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 SAFBQ15424 915 aaKnown RBP eCLIP9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 DPCR1Q3MIW9 517 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 AMIGO3Q86WK7 504 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 STK11IPQ8N1F8 1099 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 ESR2Q92731 530 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 FBXW7Q969H0 707 aa9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 RIOK1Q9BRS2 568 aaKnown RBP9.61□□□□□ -0.87
SND1-IT1-201ENST00000623342 UBAC1Q9BSL1 405 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms