RNA–Protein interactions for RNA: ENST00000621987.4

FMR1-220, Transcript of fragile X mental retardation 1, humanhuman

TSL 5 BASIC

Gene FMR1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-220ENST00000621987 TMX3Q96JJ7 454 aa15.24■□□□□ 0.03
FMR1-220ENST00000621987 ARPP21Q9UBL0 812 aaPredicted RBP15.24■□□□□ 0.03
FMR1-220ENST00000621987 WDR19Q8NEZ3 1342 aa15.24■□□□□ 0.03
FMR1-220ENST00000621987 USP17L12C9JPN9 530 aa15.24■□□□□ 0.03
FMR1-220ENST00000621987 USP17L21D6R901 530 aa15.24■□□□□ 0.03
FMR1-220ENST00000621987 FGRP09769 529 aa15.24■□□□□ 0.03
FMR1-220ENST00000621987 USP5P45974 858 aa15.24■□□□□ 0.03
FMR1-220ENST00000621987 CXCL9Q07325 125 aa15.24■□□□□ 0.03
FMR1-220ENST00000621987 CUL4AQ13619 759 aa15.24■□□□□ 0.03
FMR1-220ENST00000621987 TOB2Q14106 344 aaPredicted RBP15.24■□□□□ 0.03
FMR1-220ENST00000621987 ANKRD1Q15327 319 aa15.24■□□□□ 0.03
FMR1-220ENST00000621987 FBXL16Q8N461 479 aa15.24■□□□□ 0.03
FMR1-220ENST00000621987 JDP2Q8WYK2 163 aa15.24■□□□□ 0.03
FMR1-220ENST00000621987 AGXT2Q9BYV1 514 aa15.24■□□□□ 0.03
FMR1-220ENST00000621987 LIMCH1Q9UPQ0 1083 aa15.24■□□□□ 0.03
FMR1-220ENST00000621987 GOLGB1Q14789 3259 aaKnown RBP15.23■□□□□ 0.03
FMR1-220ENST00000621987 NEDD4P46934 1319 aa15.23■□□□□ 0.03
FMR1-220ENST00000621987 CYP2D7A0A087X1C5 515 aa15.23■□□□□ 0.03
FMR1-220ENST00000621987 MINDY4BA8MYZ0 360 aa15.23■□□□□ 0.03
FMR1-220ENST00000621987 ANTXR2P58335 489 aa15.23■□□□□ 0.03
FMR1-220ENST00000621987 AGBL3Q8NEM8 1001 aa15.23■□□□□ 0.03
FMR1-220ENST00000621987 NKX2-3Q8TAU0 364 aa15.23■□□□□ 0.03
FMR1-220ENST00000621987 TGFBRAP1Q8WUH2 860 aa15.23■□□□□ 0.03
FMR1-220ENST00000621987 TCEANC2Q96MN5 208 aa15.23■□□□□ 0.03
FMR1-220ENST00000621987 RNF41Q9H4P4 317 aaPredicted RBP15.23■□□□□ 0.03
FMR1-220ENST00000621987 CNNM2Q9H8M5 875 aa15.23■□□□□ 0.03
FMR1-220ENST00000621987 FLT1P17948 1338 aa15.22■□□□□ 0.03
FMR1-220ENST00000621987 ROBO3Q96MS0 1386 aa15.22■□□□□ 0.03
FMR1-220ENST00000621987 SMIM22K7EJ46 135 aa15.22■□□□□ 0.03
FMR1-220ENST00000621987 FZD9O00144 591 aa15.22■□□□□ 0.03
FMR1-220ENST00000621987 WDHD1O75717 1129 aaPredicted RBP15.22■□□□□ 0.03
FMR1-220ENST00000621987 USP17L8P0C7I0 530 aa15.22■□□□□ 0.03
FMR1-220ENST00000621987 PCP11498 1178 aaKnown RBP15.22■□□□□ 0.03
FMR1-220ENST00000621987 MCM5P33992 734 aa15.22■□□□□ 0.03
FMR1-220ENST00000621987 TRDNQ13061 729 aa15.22■□□□□ 0.03
FMR1-220ENST00000621987 C12orf60Q5U649 245 aa15.22■□□□□ 0.03
FMR1-220ENST00000621987 CIAPIN1Q6FI81 312 aa15.22■□□□□ 0.03
FMR1-220ENST00000621987 CDC42EP5Q6NZY7 148 aa15.22■□□□□ 0.03
FMR1-220ENST00000621987 MFSD6Q6ZSS7 791 aa15.22■□□□□ 0.03
FMR1-220ENST00000621987 Q6ZUG5 572 aa15.22■□□□□ 0.03
FMR1-220ENST00000621987 RALYLQ86SE5 291 aaKnown RBP15.22■□□□□ 0.03
FMR1-220ENST00000621987 MAPKAPK5Q8IW41 473 aa15.22■□□□□ 0.03
FMR1-220ENST00000621987 ZSCAN31Q96LW9 406 aaPredicted RBP15.22■□□□□ 0.03
FMR1-220ENST00000621987 KRT23Q9C075 422 aa15.22■□□□□ 0.03
FMR1-220ENST00000621987 INCENPQ9NQS7 918 aa15.22■□□□□ 0.03
FMR1-220ENST00000621987 USP40Q9NVE5 1235 aa15.22■□□□□ 0.03
FMR1-220ENST00000621987 MCM9Q9NXL9 1143 aa15.22■□□□□ 0.03
FMR1-220ENST00000621987 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.22■□□□□ 0.03
FMR1-220ENST00000621987 DICER1Q9UPY3 1922 aaKnown RBP15.21■□□□□ 0.03
FMR1-220ENST00000621987 PRC1O43663 620 aa15.21■□□□□ 0.02
FMR1-220ENST00000621987 CYP2D6P10635 497 aa15.21■□□□□ 0.02
FMR1-220ENST00000621987 TNIP1Q15025 636 aa15.21■□□□□ 0.02
FMR1-220ENST00000621987 NOL8Q76FK4 1167 aaKnown RBP15.21■□□□□ 0.02
FMR1-220ENST00000621987 CYB5R4Q7L1T6 521 aa15.21■□□□□ 0.02
FMR1-220ENST00000621987 TPCN1Q9ULQ1 816 aa15.21■□□□□ 0.02
FMR1-220ENST00000621987 PCDHAC2Q9Y5I4 1007 aa15.21■□□□□ 0.02
FMR1-220ENST00000621987 MYH1P12882 1939 aa15.2■□□□□ 0.02
FMR1-220ENST00000621987 B4E1Z4 1266 aa15.2■□□□□ 0.02
FMR1-220ENST00000621987 DDIT3P35638 169 aa15.2■□□□□ 0.02
FMR1-220ENST00000621987 MMP14P50281 582 aa15.2■□□□□ 0.02
FMR1-220ENST00000621987 EVX2Q03828 476 aa15.2■□□□□ 0.02
FMR1-220ENST00000621987 ARHGAP27Q6ZUM4 889 aa15.2■□□□□ 0.02
FMR1-220ENST00000621987 LARP6Q9BRS8 491 aaKnown RBP15.2■□□□□ 0.02
FMR1-220ENST00000621987 SH2B1Q9NRF2 756 aaPredicted RBP15.2■□□□□ 0.02
FMR1-220ENST00000621987 ZBTB12Q9Y330 459 aaPredicted RBP15.2■□□□□ 0.02
FMR1-220ENST00000621987 SBF1O95248 1867 aa15.2■□□□□ 0.02
FMR1-220ENST00000621987 ORC4O43929 436 aa15.19■□□□□ 0.02
FMR1-220ENST00000621987 LARGE1O95461 756 aa15.19■□□□□ 0.02
FMR1-220ENST00000621987 LMNB1P20700 586 aa15.19■□□□□ 0.02
FMR1-220ENST00000621987 EVCP57679 992 aa15.19■□□□□ 0.02
FMR1-220ENST00000621987 CFAP100Q494V2 611 aa15.19■□□□□ 0.02
FMR1-220ENST00000621987 CHST3Q7LGC8 479 aa15.19■□□□□ 0.02
FMR1-220ENST00000621987 MTMR14Q8NCE2 650 aa15.19■□□□□ 0.02
FMR1-220ENST00000621987 SPRYD3Q8NCJ5 442 aa15.19■□□□□ 0.02
FMR1-220ENST00000621987 INTS4Q96HW7 963 aaKnown RBP15.19■□□□□ 0.02
FMR1-220ENST00000621987 IDI2Q9BXS1 227 aa15.19■□□□□ 0.02
FMR1-220ENST00000621987 LRRC2Q9BYS8 371 aa15.19■□□□□ 0.02
FMR1-220ENST00000621987 DDX4Q9NQI0 724 aaKnown RBP15.19■□□□□ 0.02
FMR1-220ENST00000621987 HDAC9Q9UKV0 1011 aa15.19■□□□□ 0.02
FMR1-220ENST00000621987 KDM4AO75164 1064 aa15.18■□□□□ 0.02
FMR1-220ENST00000621987 SLC3A2P08195 630 aaKnown RBP15.18■□□□□ 0.02
FMR1-220ENST00000621987 YBX3P16989 372 aaKnown RBP eCLIP15.18■□□□□ 0.02
FMR1-220ENST00000621987 RPS12P25398 132 aaKnown RBP15.18■□□□□ 0.02
FMR1-220ENST00000621987 NT5C2P49902 561 aa15.18■□□□□ 0.02
FMR1-220ENST00000621987 RBM5P52756 815 aaKnown RBP eCLIP15.18■□□□□ 0.02
FMR1-220ENST00000621987 ME3Q16798 604 aa15.18■□□□□ 0.02
FMR1-220ENST00000621987 AMOTL1Q8IY63 956 aa15.18■□□□□ 0.02
FMR1-220ENST00000621987 BRF1Q92994 677 aa15.18■□□□□ 0.02
FMR1-220ENST00000621987 ZBED3Q96IU2 234 aaPredicted RBP15.18■□□□□ 0.02
FMR1-220ENST00000621987 MTA3Q9BTC8 594 aa15.18■□□□□ 0.02
FMR1-220ENST00000621987 ZSWIM5Q9P217 1185 aa15.18■□□□□ 0.02
FMR1-220ENST00000621987 SAP30BPQ9UHR5 308 aaKnown RBP15.18■□□□□ 0.02
FMR1-220ENST00000621987 SPDYE2BA6NHP3 402 aa15.17■□□□□ 0.02
FMR1-220ENST00000621987 SH2B2O14492 632 aaPredicted RBP15.17■□□□□ 0.02
FMR1-220ENST00000621987 SPDYE6P0CI01 402 aa15.17■□□□□ 0.02
FMR1-220ENST00000621987 PLCD1P51178 756 aa15.17■□□□□ 0.02
FMR1-220ENST00000621987 EIF6P56537 245 aaKnown RBP15.17■□□□□ 0.02
FMR1-220ENST00000621987 ST3GAL1Q11201 340 aa15.17■□□□□ 0.02
FMR1-220ENST00000621987 OGFOD1Q8N543 542 aa15.17■□□□□ 0.02
FMR1-220ENST00000621987 IGDCC4Q8TDY8 1250 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms