RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 SLURP2P0DP57 97 aa13.14□□□□□ -0.31
POLR2J3-221ENST00000621093 USP5P45974 858 aa13.14□□□□□ -0.31
POLR2J3-221ENST00000621093 SLC4A8Q2Y0W8 1093 aa13.14□□□□□ -0.31
POLR2J3-221ENST00000621093 VPS53Q5VIR6 699 aa13.14□□□□□ -0.31
POLR2J3-221ENST00000621093 SH3BP5LQ7L8J4 393 aa13.14□□□□□ -0.31
POLR2J3-221ENST00000621093 SULF1Q8IWU6 871 aa13.14□□□□□ -0.31
POLR2J3-221ENST00000621093 CRNKL1Q9BZJ0 848 aaKnown RBP13.14□□□□□ -0.31
POLR2J3-221ENST00000621093 DEFB129Q9H1M3 183 aa13.14□□□□□ -0.31
POLR2J3-221ENST00000621093 SAP30BPQ9UHR5 308 aaKnown RBP13.14□□□□□ -0.31
POLR2J3-221ENST00000621093 FLT1P17948 1338 aa13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 OTOFQ9HC10 1997 aa13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 SSC5DA1L4H1 1573 aa13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 DDTLA6NHG4 134 aaPredicted RBP13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 GSG1L2A8MUP6 293 aa13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 HIP1O00291 1037 aa13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 FOXP2O15409 715 aa13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 ITGBL1O95965 494 aaPredicted RBP13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 EVX2Q03828 476 aa13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 NBPF12Q5TAG4 269 aaPredicted RBP13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 FKBP1CQ5VVH2 108 aa13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 CDC37L1Q7L3B6 337 aa13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 TICAM2Q86XR7 235 aa13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 RBM46Q8TBY0 533 aaKnown RBP13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 FAM151AQ8WW52 585 aa13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 CDCA5Q96FF9 252 aa13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 TEPSINQ96N21 525 aa13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 OSBPL5Q9H0X9 879 aaPredicted RBP13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 EPB41L4AQ9HCS5 686 aaPredicted RBP13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 LAMA4Q16363 1823 aa13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 CCDC171Q6TFL3 1326 aa13.13□□□□□ -0.31
POLR2J3-221ENST00000621093 ATAD5Q96QE3 1844 aa13.12□□□□□ -0.31
POLR2J3-221ENST00000621093 SMIM22K7EJ46 135 aa13.12□□□□□ -0.31
POLR2J3-221ENST00000621093 ENTPD3O75355 529 aa13.12□□□□□ -0.31
POLR2J3-221ENST00000621093 CDC45O75419 566 aa13.12□□□□□ -0.31
POLR2J3-221ENST00000621093 CYP2D6P10635 497 aa13.12□□□□□ -0.31
POLR2J3-221ENST00000621093 TNNI2P48788 182 aa13.12□□□□□ -0.31
POLR2J3-221ENST00000621093 FAM83AQ86UY5 434 aa13.12□□□□□ -0.31
POLR2J3-221ENST00000621093 SMC1BQ8NDV3 1235 aa13.12□□□□□ -0.31
POLR2J3-221ENST00000621093 DCP1AQ9NPI6 582 aaPredicted RBP13.12□□□□□ -0.31
POLR2J3-221ENST00000621093 MKRN1Q9UHC7 482 aaKnown RBP13.12□□□□□ -0.31
POLR2J3-221ENST00000621093 FZD1Q9UP38 647 aa13.12□□□□□ -0.31
POLR2J3-221ENST00000621093 CYP2D7A0A087X1C5 515 aa13.11□□□□□ -0.31
POLR2J3-221ENST00000621093 PATL2C9JE40 543 aaKnown RBP13.11□□□□□ -0.31
POLR2J3-221ENST00000621093 SGSM2O43147 1006 aa13.11□□□□□ -0.31
POLR2J3-221ENST00000621093 TNFAIP1Q13829 316 aa13.11□□□□□ -0.31
POLR2J3-221ENST00000621093 CERS3Q8IU89 383 aa13.11□□□□□ -0.31
POLR2J3-221ENST00000621093 ESYT1Q9BSJ8 1104 aa13.11□□□□□ -0.31
POLR2J3-221ENST00000621093 ZNF408Q9H9D4 720 aa13.11□□□□□ -0.31
POLR2J3-221ENST00000621093 PALD1Q9ULE6 856 aa13.11□□□□□ -0.31
POLR2J3-221ENST00000621093 PAPPA2Q9BXP8 1791 aa13.11□□□□□ -0.31
POLR2J3-221ENST00000621093 NPM3O75607 178 aaKnown RBP13.1□□□□□ -0.31
POLR2J3-221ENST00000621093 APPP05067 770 aa13.1□□□□□ -0.31
POLR2J3-221ENST00000621093 HSPD1P10809 573 aaKnown RBP13.1□□□□□ -0.31
POLR2J3-221ENST00000621093 PTH1RQ03431 593 aa13.1□□□□□ -0.31
POLR2J3-221ENST00000621093 PRKG1Q13976 671 aa13.1□□□□□ -0.31
POLR2J3-221ENST00000621093 ZSCAN29Q8IWY8 852 aaPredicted RBP13.1□□□□□ -0.31
POLR2J3-221ENST00000621093 IFNL3Q8IZI9 196 aa13.1□□□□□ -0.31
POLR2J3-221ENST00000621093 RUFY2Q8WXA3 655 aa13.1□□□□□ -0.31
POLR2J3-221ENST00000621093 PASKQ96RG2 1323 aa13.1□□□□□ -0.31
POLR2J3-221ENST00000621093 COL2A1P02458 1487 aaPredicted RBP13.1□□□□□ -0.31
POLR2J3-221ENST00000621093 RPAP1Q9BWH6 1393 aaPredicted RBP13.09□□□□□ -0.31
POLR2J3-221ENST00000621093 FAM196BA6NMK8 535 aa13.09□□□□□ -0.31
POLR2J3-221ENST00000621093 GNAT2P19087 354 aa13.09□□□□□ -0.31
POLR2J3-221ENST00000621093 PLCD1P51178 756 aa13.09□□□□□ -0.31
POLR2J3-221ENST00000621093 CTR9Q6PD62 1173 aa13.09□□□□□ -0.31
POLR2J3-221ENST00000621093 MOB2Q70IA6 237 aa13.09□□□□□ -0.31
POLR2J3-221ENST00000621093 MIGA2Q7L4E1 593 aa13.09□□□□□ -0.31
POLR2J3-221ENST00000621093 ATP8A2Q9NTI2 1148 aa13.09□□□□□ -0.31
POLR2J3-221ENST00000621093 MCM9Q9NXL9 1143 aa13.09□□□□□ -0.31
POLR2J3-221ENST00000621093 PPP2R3BQ9Y5P8 575 aa13.09□□□□□ -0.31
POLR2J3-221ENST00000621093 RAD50Q92878 1312 aa13.09□□□□□ -0.31
POLR2J3-221ENST00000621093 ATRNL1Q5VV63 1379 aa13.08□□□□□ -0.31
POLR2J3-221ENST00000621093 USP17L12C9JPN9 530 aa13.08□□□□□ -0.32
POLR2J3-221ENST00000621093 USP17L21D6R901 530 aa13.08□□□□□ -0.32
POLR2J3-221ENST00000621093 POLR3DP05423 398 aaPredicted RBP13.08□□□□□ -0.32
POLR2J3-221ENST00000621093 TDO2P48775 406 aa13.08□□□□□ -0.32
POLR2J3-221ENST00000621093 FSTL1Q12841 308 aa13.08□□□□□ -0.32
POLR2J3-221ENST00000621093 CST9Q5W186 159 aa13.08□□□□□ -0.32
POLR2J3-221ENST00000621093 STK11IPQ8N1F8 1099 aa13.08□□□□□ -0.32
POLR2J3-221ENST00000621093 CSRNP1Q96S65 589 aa13.08□□□□□ -0.32
POLR2J3-221ENST00000621093 MINDY4BA8MYZ0 360 aa13.07□□□□□ -0.32
POLR2J3-221ENST00000621093 CELF2O95319 508 aaKnown RBP13.07□□□□□ -0.32
POLR2J3-221ENST00000621093 FGAP02671 866 aa13.07□□□□□ -0.32
POLR2J3-221ENST00000621093 MFAP1P55081 439 aaKnown RBP13.07□□□□□ -0.32
POLR2J3-221ENST00000621093 DYNLL2Q96FJ2 89 aa13.07□□□□□ -0.32
POLR2J3-221ENST00000621093 DOCK1Q14185 1865 aa13.07□□□□□ -0.32
POLR2J3-221ENST00000621093 ALX1Q15699 326 aa13.06□□□□□ -0.32
POLR2J3-221ENST00000621093 SUPT20HL1Q3ZLR7 823 aa13.06□□□□□ -0.32
POLR2J3-221ENST00000621093 C12orf60Q5U649 245 aa13.06□□□□□ -0.32
POLR2J3-221ENST00000621093 GIMAP6Q6P9H5 292 aa13.06□□□□□ -0.32
POLR2J3-221ENST00000621093 CASC1Q6TDU7 716 aa13.06□□□□□ -0.32
POLR2J3-221ENST00000621093 LSG1Q9H089 658 aaKnown RBP13.06□□□□□ -0.32
POLR2J3-221ENST00000621093 NAPBQ9H115 298 aa13.06□□□□□ -0.32
POLR2J3-221ENST00000621093 DHX36Q9H2U1 1008 aaKnown RBP13.06□□□□□ -0.32
POLR2J3-221ENST00000621093 DNAJC18Q9H819 358 aa13.06□□□□□ -0.32
POLR2J3-221ENST00000621093 TACC3Q9Y6A5 838 aa13.06□□□□□ -0.32
POLR2J3-221ENST00000621093 PHIPQ8WWQ0 1821 aa13.06□□□□□ -0.32
POLR2J3-221ENST00000621093 USP2O75604 605 aaPredicted RBP13.05□□□□□ -0.32
POLR2J3-221ENST00000621093 HLA-DOAP06340 250 aa13.05□□□□□ -0.32
POLR2J3-221ENST00000621093 HAND2P61296 217 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms