RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 KCPQ6ZWJ8 1503 aa22.47■■□□□ 1.19
PDLIM3-212ENST00000620787 ZBTB22O15209 634 aa22.47■■□□□ 1.19
PDLIM3-212ENST00000620787 STX10O60499 249 aa22.47■■□□□ 1.19
PDLIM3-212ENST00000620787 RANBP6O60518 1105 aaKnown RBP22.47■■□□□ 1.19
PDLIM3-212ENST00000620787 GNG11P61952 73 aa22.47■■□□□ 1.19
PDLIM3-212ENST00000620787 RSRC2Q7L4I2 434 aaKnown RBP22.47■■□□□ 1.19
PDLIM3-212ENST00000620787 ELOA2Q8IYF1 753 aaPredicted RBP22.47■■□□□ 1.19
PDLIM3-212ENST00000620787 GPR161Q8N6U8 529 aaKnown RBP22.47■■□□□ 1.19
PDLIM3-212ENST00000620787 KIFC2Q96AC6 838 aa22.47■■□□□ 1.19
PDLIM3-212ENST00000620787 HSP90AA4PQ58FG1 418 aa22.47■■□□□ 1.19
PDLIM3-212ENST00000620787 TMEM51Q9NW97 253 aa22.47■■□□□ 1.19
PDLIM3-212ENST00000620787 MAN1B1Q9UKM7 699 aa22.47■■□□□ 1.19
PDLIM3-212ENST00000620787 ATRNO75882 1429 aa22.47■■□□□ 1.19
PDLIM3-212ENST00000620787 POLR3GO15318 223 aaPredicted RBP22.46■■□□□ 1.19
PDLIM3-212ENST00000620787 ZNF18P17022 549 aa22.46■■□□□ 1.19
PDLIM3-212ENST00000620787 PPP2R3AQ06190 1150 aa22.46■■□□□ 1.19
PDLIM3-212ENST00000620787 CPLX2Q6PUV4 134 aaKnown RBP22.46■■□□□ 1.19
PDLIM3-212ENST00000620787 MICU3Q86XE3 530 aa22.46■■□□□ 1.19
PDLIM3-212ENST00000620787 UBN2Q6ZU65 1347 aa22.46■■□□□ 1.19
PDLIM3-212ENST00000620787 PAPPAQ13219 1627 aa22.46■■□□□ 1.19
PDLIM3-212ENST00000620787 CHD4Q14839 1912 aa22.46■■□□□ 1.19
PDLIM3-212ENST00000620787 IRX5P78411 483 aaPredicted RBP22.46■■□□□ 1.19
PDLIM3-212ENST00000620787 FMR1Q06787 632 aaKnown RBP eCLIP22.46■■□□□ 1.19
PDLIM3-212ENST00000620787 TEX35Q5T0J7 233 aa22.46■■□□□ 1.19
PDLIM3-212ENST00000620787 PDILTQ8N807 584 aa22.46■■□□□ 1.19
PDLIM3-212ENST00000620787 FAM217BQ9NTX9 383 aaPredicted RBP22.46■■□□□ 1.19
PDLIM3-212ENST00000620787 MAP3K15Q6ZN16 1313 aa22.46■■□□□ 1.19
PDLIM3-212ENST00000620787 RIC1Q4ADV7 1423 aa22.45■■□□□ 1.18
PDLIM3-212ENST00000620787 SPECC1LQ69YQ0 1117 aa22.45■■□□□ 1.18
PDLIM3-212ENST00000620787 KRI1Q8N9T8 703 aaKnown RBP22.45■■□□□ 1.18
PDLIM3-212ENST00000620787 ISCA1Q9BUE6 129 aa22.45■■□□□ 1.18
PDLIM3-212ENST00000620787 UBE2Q2LH0YL09 131 aa22.45■■□□□ 1.18
PDLIM3-212ENST00000620787 ADD2P35612 726 aa22.45■■□□□ 1.18
PDLIM3-212ENST00000620787 IARSP41252 1262 aaKnown RBP22.45■■□□□ 1.18
PDLIM3-212ENST00000620787 MCAMP43121 646 aa22.45■■□□□ 1.18
PDLIM3-212ENST00000620787 ADKP55263 362 aaKnown RBP22.45■■□□□ 1.18
PDLIM3-212ENST00000620787 HNRNPH2P55795 449 aaKnown RBP22.45■■□□□ 1.18
PDLIM3-212ENST00000620787 STK11IPQ8N1F8 1099 aa22.45■■□□□ 1.18
PDLIM3-212ENST00000620787 B4E1Z4 1266 aa22.44■■□□□ 1.18
PDLIM3-212ENST00000620787 TRIM29Q14134 588 aa22.44■■□□□ 1.18
PDLIM3-212ENST00000620787 SPECC1Q5M775 1068 aa22.44■■□□□ 1.18
PDLIM3-212ENST00000620787 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.44■■□□□ 1.18
PDLIM3-212ENST00000620787 NFE2L3Q9Y4A8 694 aa22.44■■□□□ 1.18
PDLIM3-212ENST00000620787 ZBTB43O43298 467 aa22.43■■□□□ 1.18
PDLIM3-212ENST00000620787 IGDCC4Q8TDY8 1250 aa22.43■■□□□ 1.18
PDLIM3-212ENST00000620787 TULP2O00295 520 aa22.43■■□□□ 1.18
PDLIM3-212ENST00000620787 PRR29P0C7W0 189 aa22.43■■□□□ 1.18
PDLIM3-212ENST00000620787 OAS2P29728 719 aaKnown RBP22.43■■□□□ 1.18
PDLIM3-212ENST00000620787 POSTNQ15063 836 aa22.43■■□□□ 1.18
PDLIM3-212ENST00000620787 CHRNA2Q15822 529 aa22.43■■□□□ 1.18
PDLIM3-212ENST00000620787 NT5DC1Q5TFE4 455 aa22.43■■□□□ 1.18
PDLIM3-212ENST00000620787 TMEM87BQ96K49 555 aa22.43■■□□□ 1.18
PDLIM3-212ENST00000620787 CCDC85AQ96PX6 553 aaPredicted RBP22.43■■□□□ 1.18
PDLIM3-212ENST00000620787 LY9Q9HBG7 655 aa22.43■■□□□ 1.18
PDLIM3-212ENST00000620787 GOLGA8AA7E2F4 631 aa22.42■■□□□ 1.18
PDLIM3-212ENST00000620787 ENOX1Q8TC92 643 aaKnown RBP22.42■■□□□ 1.18
PDLIM3-212ENST00000620787 MYL10Q9BUA6 226 aa22.42■■□□□ 1.18
PDLIM3-212ENST00000620787 LRP6O75581 1613 aa22.42■■□□□ 1.18
PDLIM3-212ENST00000620787 SGMS1Q86VZ5 419 aa22.42■■□□□ 1.18
PDLIM3-212ENST00000620787 RABGGTAQ92696 567 aa22.42■■□□□ 1.18
PDLIM3-212ENST00000620787 PARD6BQ9BYG5 372 aa22.42■■□□□ 1.18
PDLIM3-212ENST00000620787 HOOK1Q9UJC3 728 aaKnown RBP22.42■■□□□ 1.18
PDLIM3-212ENST00000620787 STK36Q9NRP7 1315 aa22.41■■□□□ 1.18
PDLIM3-212ENST00000620787 SARSP49591 514 aaKnown RBP22.41■■□□□ 1.18
PDLIM3-212ENST00000620787 ST5P78524 1137 aa22.41■■□□□ 1.18
PDLIM3-212ENST00000620787 GRIN1Q05586 938 aa22.41■■□□□ 1.18
PDLIM3-212ENST00000620787 MORC3Q14149 939 aa22.41■■□□□ 1.18
PDLIM3-212ENST00000620787 SLC9C2Q5TAH2 1124 aa22.41■■□□□ 1.18
PDLIM3-212ENST00000620787 NOSTRINQ8IVI9 506 aa22.41■■□□□ 1.18
PDLIM3-212ENST00000620787 TRMT44Q8IYL2 757 aaKnown RBP22.41■■□□□ 1.18
PDLIM3-212ENST00000620787 MLKLQ8NB16 471 aa22.41■■□□□ 1.18
PDLIM3-212ENST00000620787 NEK11Q8NG66 645 aa22.41■■□□□ 1.18
PDLIM3-212ENST00000620787 DHX58Q96C10 678 aa22.41■■□□□ 1.18
PDLIM3-212ENST00000620787 MED15Q96RN5 788 aa22.41■■□□□ 1.18
PDLIM3-212ENST00000620787 CDK11BP21127 795 aaKnown RBP22.41■■□□□ 1.18
PDLIM3-212ENST00000620787 TOB1P50616 345 aaPredicted RBP22.41■■□□□ 1.18
PDLIM3-212ENST00000620787 SMC1AQ14683 1233 aaKnown RBP22.41■■□□□ 1.18
PDLIM3-212ENST00000620787 DESI2Q9BSY9 194 aa22.41■■□□□ 1.18
PDLIM3-212ENST00000620787 ZCCHC17Q9NP64 241 aaKnown RBP22.41■■□□□ 1.18
PDLIM3-212ENST00000620787 FBXO2Q9UK22 296 aaPredicted RBP22.41■■□□□ 1.18
PDLIM3-212ENST00000620787 ZNF827Q17R98 1081 aa22.4■■□□□ 1.18
PDLIM3-212ENST00000620787 TAF7LQ5H9L4 462 aa22.4■■□□□ 1.18
PDLIM3-212ENST00000620787 NFXL1Q6ZNB6 911 aa22.4■■□□□ 1.18
PDLIM3-212ENST00000620787 SMARCE1Q969G3 411 aa22.4■■□□□ 1.18
PDLIM3-212ENST00000620787 SLC26A6Q9BXS9 759 aa22.4■■□□□ 1.18
PDLIM3-212ENST00000620787 ARFGAP3Q9NP61 516 aa22.4■■□□□ 1.18
PDLIM3-212ENST00000620787 RAI14Q9P0K7 980 aa22.4■■□□□ 1.18
PDLIM3-212ENST00000620787 KARSQ15046 597 aaKnown RBP22.4■■□□□ 1.18
PDLIM3-212ENST00000620787 CABLES1Q8TDN4 633 aa22.4■■□□□ 1.18
PDLIM3-212ENST00000620787 GOLGA1Q92805 767 aa22.4■■□□□ 1.18
PDLIM3-212ENST00000620787 CCDC34Q96HJ3 373 aa22.4■■□□□ 1.18
PDLIM3-212ENST00000620787 FUT8Q9BYC5 575 aa22.4■■□□□ 1.18
PDLIM3-212ENST00000620787 MRPL44Q9H9J2 332 aaKnown RBP22.4■■□□□ 1.18
PDLIM3-212ENST00000620787 PIH1D3Q9NQM4 214 aaKnown RBP22.4■■□□□ 1.18
PDLIM3-212ENST00000620787 SERTAD1Q9UHV2 236 aa22.4■■□□□ 1.18
PDLIM3-212ENST00000620787 APPP05067 770 aa22.39■■□□□ 1.18
PDLIM3-212ENST00000620787 CSF1RP07333 972 aa22.39■■□□□ 1.18
PDLIM3-212ENST00000620787 PTPREP23469 700 aa22.39■■□□□ 1.18
PDLIM3-212ENST00000620787 TCIRG1Q13488 830 aa22.39■■□□□ 1.18
PDLIM3-212ENST00000620787 DACH1Q9UI36 760 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms