RNA–Protein interactions for RNA: ENST00000620578.4

COPS7B-224, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2 BASIC

Gene COPS7B, Length 2,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-224ENST00000620578 CHMP4CQ96CF2 233 aa17.97■□□□□ 0.47
COPS7B-224ENST00000620578 FHDC1Q9C0D6 1143 aaPredicted RBP17.97■□□□□ 0.47
COPS7B-224ENST00000620578 BRPF3Q9ULD4 1205 aa17.97■□□□□ 0.47
COPS7B-224ENST00000620578 KIF13BQ9NQT8 1826 aa17.97■□□□□ 0.47
COPS7B-224ENST00000620578 RBM5P52756 815 aaKnown RBP eCLIP17.97■□□□□ 0.47
COPS7B-224ENST00000620578 MFSD6Q6ZSS7 791 aa17.97■□□□□ 0.47
COPS7B-224ENST00000620578 TEX11Q8IYF3 940 aa17.97■□□□□ 0.47
COPS7B-224ENST00000620578 MKRN1Q9UHC7 482 aaKnown RBP17.97■□□□□ 0.47
COPS7B-224ENST00000620578 DLEC1Q9Y238 1755 aa17.96■□□□□ 0.47
COPS7B-224ENST00000620578 SHTN1A0MZ66 631 aa17.96■□□□□ 0.47
COPS7B-224ENST00000620578 STRIP1Q5VSL9 837 aa17.96■□□□□ 0.47
COPS7B-224ENST00000620578 CC2D2BQ6DHV5 1058 aa17.96■□□□□ 0.47
COPS7B-224ENST00000620578 MYL10Q9BUA6 226 aa17.96■□□□□ 0.47
COPS7B-224ENST00000620578 RTN4Q9NQC3 1192 aaKnown RBP17.96■□□□□ 0.47
COPS7B-224ENST00000620578 DDX4Q9NQI0 724 aaKnown RBP17.96■□□□□ 0.47
COPS7B-224ENST00000620578 SCAF8Q9UPN6 1271 aaKnown RBP17.96■□□□□ 0.47
COPS7B-224ENST00000620578 PSMD14O00487 310 aa17.96■□□□□ 0.47
COPS7B-224ENST00000620578 GSTO1P78417 241 aa17.96■□□□□ 0.47
COPS7B-224ENST00000620578 TRDNQ13061 729 aa17.96■□□□□ 0.47
COPS7B-224ENST00000620578 FOXD4L6Q3SYB3 417 aaPredicted RBP17.96■□□□□ 0.47
COPS7B-224ENST00000620578 FAM47AQ5JRC9 791 aa17.96■□□□□ 0.47
COPS7B-224ENST00000620578 FOXD4L3Q6VB84 417 aaPredicted RBP17.96■□□□□ 0.47
COPS7B-224ENST00000620578 SPON1Q9HCB6 807 aa17.96■□□□□ 0.47
COPS7B-224ENST00000620578 TAOK2Q9UL54 1235 aa17.96■□□□□ 0.47
COPS7B-224ENST00000620578 CD2APQ9Y5K6 639 aa17.96■□□□□ 0.47
COPS7B-224ENST00000620578 NMT2O60551 498 aa17.95■□□□□ 0.46
COPS7B-224ENST00000620578 JAK2O60674 1132 aa17.95■□□□□ 0.46
COPS7B-224ENST00000620578 BAG3O95817 575 aa17.95■□□□□ 0.46
COPS7B-224ENST00000620578 MCM5P33992 734 aa17.95■□□□□ 0.46
COPS7B-224ENST00000620578 NFIAQ12857 509 aa17.95■□□□□ 0.46
COPS7B-224ENST00000620578 APOBEC3HQ6NTF7 200 aaKnown RBP17.95■□□□□ 0.46
COPS7B-224ENST00000620578 ZFPM1Q8IX07 1006 aa17.95■□□□□ 0.46
COPS7B-224ENST00000620578 CCDC144CPQ8IYA2 1237 aa17.95■□□□□ 0.46
COPS7B-224ENST00000620578 PSMD1Q99460 953 aa17.95■□□□□ 0.46
COPS7B-224ENST00000620578 CHMP5Q9NZZ3 219 aa17.95■□□□□ 0.46
COPS7B-224ENST00000620578 LDHCP07864 332 aa17.95■□□□□ 0.46
COPS7B-224ENST00000620578 PPP4CP60510 307 aa17.95■□□□□ 0.46
COPS7B-224ENST00000620578 ZDHHC9Q9Y397 364 aa17.95■□□□□ 0.46
COPS7B-224ENST00000620578 CRKP46108 304 aa17.94■□□□□ 0.46
COPS7B-224ENST00000620578 SCRN1Q12765 414 aa17.94■□□□□ 0.46
COPS7B-224ENST00000620578 GAKO14976 1311 aa17.94■□□□□ 0.46
COPS7B-224ENST00000620578 RANBP6O60518 1105 aaKnown RBP17.94■□□□□ 0.46
COPS7B-224ENST00000620578 HMGB1P09429 215 aaKnown RBP17.94■□□□□ 0.46
COPS7B-224ENST00000620578 IARSP41252 1262 aaKnown RBP17.94■□□□□ 0.46
COPS7B-224ENST00000620578 NOL10Q9BSC4 688 aaKnown RBP17.94■□□□□ 0.46
COPS7B-224ENST00000620578 USP40Q9NVE5 1235 aa17.94■□□□□ 0.46
COPS7B-224ENST00000620578 ZBTB22O15209 634 aa17.93■□□□□ 0.46
COPS7B-224ENST00000620578 TCP10Q12799 353 aa17.93■□□□□ 0.46
COPS7B-224ENST00000620578 CDC42EP5Q6NZY7 148 aa17.93■□□□□ 0.46
COPS7B-224ENST00000620578 SUPT20HQ8NEM7 779 aa17.93■□□□□ 0.46
COPS7B-224ENST00000620578 STAG1Q8WVM7 1258 aa17.93■□□□□ 0.46
COPS7B-224ENST00000620578 DDX11Q96FC9 970 aa17.93■□□□□ 0.46
COPS7B-224ENST00000620578 TAOK3Q9H2K8 898 aa17.93■□□□□ 0.46
COPS7B-224ENST00000620578 NFKBIBQ15653 356 aa17.93■□□□□ 0.46
COPS7B-224ENST00000620578 FAM163AQ96GL9 167 aaPredicted RBP17.93■□□□□ 0.46
COPS7B-224ENST00000620578 ATP8A2Q9NTI2 1148 aa17.93■□□□□ 0.46
COPS7B-224ENST00000620578 KLF18A0A0U1RQI7 1052 aa17.92■□□□□ 0.46
COPS7B-224ENST00000620578 PDIA3P30101 505 aaKnown RBP17.92■□□□□ 0.46
COPS7B-224ENST00000620578 FOSBP53539 338 aa17.92■□□□□ 0.46
COPS7B-224ENST00000620578 IGDCC4Q8TDY8 1250 aa17.92■□□□□ 0.46
COPS7B-224ENST00000620578 TNPO1Q92973 898 aaKnown RBP17.92■□□□□ 0.46
COPS7B-224ENST00000620578 FLT1P17948 1338 aa17.92■□□□□ 0.46
COPS7B-224ENST00000620578 WDHD1O75717 1129 aaPredicted RBP17.92■□□□□ 0.46
COPS7B-224ENST00000620578 GJB2P29033 226 aa17.92■□□□□ 0.46
COPS7B-224ENST00000620578 CXCL9Q07325 125 aa17.92■□□□□ 0.46
COPS7B-224ENST00000620578 TEKT1Q969V4 418 aa17.92■□□□□ 0.46
COPS7B-224ENST00000620578 PRMT6Q96LA8 375 aaPredicted RBP17.92■□□□□ 0.46
COPS7B-224ENST00000620578 AGXT2Q9BYV1 514 aa17.92■□□□□ 0.46
COPS7B-224ENST00000620578 ZMYM6O95789 1325 aa17.92■□□□□ 0.46
COPS7B-224ENST00000620578 ALDH8A1Q9H2A2 487 aaPredicted RBP17.91■□□□□ 0.46
COPS7B-224ENST00000620578 TDRD3Q9H7E2 651 aaKnown RBP17.91■□□□□ 0.46
COPS7B-224ENST00000620578 BRCA1P38398 1863 aaKnown RBP17.91■□□□□ 0.46
COPS7B-224ENST00000620578 IFIT3O14879 490 aaKnown RBP17.91■□□□□ 0.46
COPS7B-224ENST00000620578 POLR3DP05423 398 aaPredicted RBP17.91■□□□□ 0.46
COPS7B-224ENST00000620578 ANKRD1Q15327 319 aa17.91■□□□□ 0.46
COPS7B-224ENST00000620578 C12orf60Q5U649 245 aa17.91■□□□□ 0.46
COPS7B-224ENST00000620578 CTDNEP1O95476 244 aa17.9■□□□□ 0.46
COPS7B-224ENST00000620578 TMEM67Q5HYA8 995 aa17.9■□□□□ 0.46
COPS7B-224ENST00000620578 HPS5Q9UPZ3 1129 aa17.9■□□□□ 0.46
COPS7B-224ENST00000620578 MAST2Q6P0Q8 1798 aa17.9■□□□□ 0.46
COPS7B-224ENST00000620578 FAM196BA6NMK8 535 aa17.9■□□□□ 0.46
COPS7B-224ENST00000620578 NIM1KQ8IY84 436 aa17.9■□□□□ 0.46
COPS7B-224ENST00000620578 GTF3C6Q969F1 213 aa17.9■□□□□ 0.46
COPS7B-224ENST00000620578 ZSCAN31Q96LW9 406 aaPredicted RBP17.9■□□□□ 0.46
COPS7B-224ENST00000620578 LY9Q9HBG7 655 aa17.9■□□□□ 0.46
COPS7B-224ENST00000620578 ANAPC4Q9UJX5 808 aa17.9■□□□□ 0.46
COPS7B-224ENST00000620578 SMC3Q9UQE7 1217 aa17.9■□□□□ 0.46
COPS7B-224ENST00000620578 UBE2Q2LH0YL09 131 aa17.89■□□□□ 0.45
COPS7B-224ENST00000620578 SH2B2O14492 632 aaPredicted RBP17.89■□□□□ 0.45
COPS7B-224ENST00000620578 EGFRP00533 1210 aa17.89■□□□□ 0.45
COPS7B-224ENST00000620578 CMTR1Q8N1G2 835 aaKnown RBP17.89■□□□□ 0.45
COPS7B-224ENST00000620578 INTS4Q96HW7 963 aaKnown RBP17.89■□□□□ 0.45
COPS7B-224ENST00000620578 ZNRF3Q9ULT6 936 aa17.89■□□□□ 0.45
COPS7B-224ENST00000620578 ADD1P35611 737 aaKnown RBP17.89■□□□□ 0.45
COPS7B-224ENST00000620578 CFAP100Q494V2 611 aa17.89■□□□□ 0.45
COPS7B-224ENST00000620578 MICU3Q86XE3 530 aa17.89■□□□□ 0.45
COPS7B-224ENST00000620578 SH2B1Q9NRF2 756 aaPredicted RBP17.89■□□□□ 0.45
COPS7B-224ENST00000620578 ANGEL1Q9UNK9 670 aaKnown RBP17.89■□□□□ 0.45
COPS7B-224ENST00000620578 CDK5RAP2Q96SN8 1893 aa17.88■□□□□ 0.45
COPS7B-224ENST00000620578 CLRN2A0PK11 232 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms