RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 CELF1Q92879 486 aaKnown RBP8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 RGS17Q9UGC6 210 aaPredicted RBP8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 IQSEC3Q9UPP2 1182 aaPredicted RBP8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 BTAF1O14981 1849 aa8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 A0A0D9SFI3 127 aa8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 A6NJR5 290 aa8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 IDH1O75874 414 aaKnown RBP8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 SLU7O95391 586 aaKnown RBP8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 SFPQP23246 707 aaKnown RBP eCLIP8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 RPS6KB1P23443 525 aa8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 ZAP70P43403 619 aa8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 EN1Q05925 392 aaPredicted RBP8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 SNW1Q13573 536 aaKnown RBP8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 GNL2Q13823 731 aaKnown RBP8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 PI16Q6UXB8 463 aa8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 ZNF467Q7Z7K2 595 aaPredicted RBP8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 IL17RAQ96F46 866 aa8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 NEK1Q96PY6 1258 aa8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 CTIFO43310 598 aaKnown RBP8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 NR1I2O75469 434 aa8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 PHKA1P46020 1223 aa8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 CCDC102BQ68D86 513 aa8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 ERO1AQ96HE7 468 aa8.08□□□□□ -1.12
SRGAP3-213ENST00000618999 NUP188Q5SRE5 1749 aa8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 CHGBP05060 677 aa8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 STK38Q15208 465 aa8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 SLC10A5Q5PT55 438 aa8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 MSL1Q68DK7 614 aa8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 FSIP1Q8NA03 581 aa8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 GLMNQ92990 594 aa8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 NUP98P52948 1817 aa8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 CARMIL3Q8ND23 1372 aa8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 ABCC12Q96J65 1359 aa8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 UQCRFS1P1P0C7P4 283 aa8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 CACTINQ8WUQ7 758 aaKnown RBP8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 SEC62Q99442 399 aaKnown RBP8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 ANKIB1Q9P2G1 1089 aa8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 AP5Z1O43299 807 aa8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 SCARF1Q14162 830 aa8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 BMS1Q14692 1282 aaKnown RBP8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 ZNF827Q17R98 1081 aa8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 SLFNL1Q499Z3 407 aa8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 CCDC129Q6ZRS4 1044 aa8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 CALCOCO1Q9P1Z2 691 aa8.07□□□□□ -1.12
SRGAP3-213ENST00000618999 BCAMP50895 628 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 GPS2Q13227 327 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 MCMDC2Q4G0Z9 681 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 CAVIN4Q5BKX8 364 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 PRR5LQ6MZQ0 368 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 SYNE3Q6ZMZ3 975 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 LRRC8AQ8IWT6 810 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 NLGN1Q8N2Q7 840 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 UBXN4Q92575 508 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 GNL3LQ9NVN8 582 aaKnown RBP8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 ZNF609O15014 1411 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 NECTIN1Q15223 517 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 COL23A1Q86Y22 540 aaPredicted RBP8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 AOPEPQ8N6M6 819 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 CCDC150Q8NCX0 1101 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 MAP4K1Q92918 833 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 BSDC1Q9NW68 430 aaPredicted RBP8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 ABCF2Q9UG63 623 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 ZNF215Q9UL58 517 aaPredicted RBP8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 MINPP1Q9UNW1 487 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 NHSQ6T4R5 1651 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 CPLX1O14810 134 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 RNF113AO15541 343 aaKnown RBP8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 CDC25BP30305 580 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 ELF2Q15723 593 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 EZH2Q15910 746 aaKnown RBP8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 PLA2G4DQ86XP0 818 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 FLAD1Q8NFF5 587 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 MRFAP1L1Q96HT8 127 aa8.06□□□□□ -1.12
SRGAP3-213ENST00000618999 MCAMP43121 646 aa8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 GYG1P46976 350 aa8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 TMCO3Q6UWJ1 677 aa8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 Q6ZUG5 572 aa8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 VGLL2Q8N8G2 317 aa8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 TIGD1Q96MW7 591 aa8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 NOL10Q9BSC4 688 aaKnown RBP8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 PLSCR2Q9NRY7 297 aa8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 STK32BQ9NY57 414 aa8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 BIN2Q9UBW5 565 aaPredicted RBP8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 CTNNA3Q9UI47 895 aa8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 JAK2O60674 1132 aa8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 TNNT3P45378 269 aaPredicted RBP8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 SLC9C2Q5TAH2 1124 aa8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 TMC6Q7Z403 805 aa8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 ZNF589Q86UQ0 364 aaPredicted RBP8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 LRP2BPQ9P2M1 347 aa8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 DDX41Q9UJV9 622 aaKnown RBP8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 PARP3Q9Y6F1 533 aa8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 APPP05067 770 aa8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 BAG6P46379 1132 aa8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 TTF1Q15361 905 aaPredicted RBP8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 BEGAINQ9BUH8 593 aa8.05□□□□□ -1.12
SRGAP3-213ENST00000618999 MMP10P09238 476 aa8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 GUCY1B3Q02153 619 aa8.04□□□□□ -1.12
SRGAP3-213ENST00000618999 DEFB132Q7Z7B7 95 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms