RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 LONRF2Q1L5Z9 754 aa18.28■□□□□ 0.52
CNTNAP3B-214ENST00000618777 LGSNQ5TDP6 509 aa18.28■□□□□ 0.52
CNTNAP3B-214ENST00000618777 SNX16P57768 344 aa18.27■□□□□ 0.52
CNTNAP3B-214ENST00000618777 CREB3L3Q68CJ9 461 aa18.27■□□□□ 0.52
CNTNAP3B-214ENST00000618777 TCP11Q8WWU5 503 aa18.27■□□□□ 0.52
CNTNAP3B-214ENST00000618777 ESR2Q92731 530 aa18.27■□□□□ 0.52
CNTNAP3B-214ENST00000618777 VAT1LQ9HCJ6 419 aa18.27■□□□□ 0.52
CNTNAP3B-214ENST00000618777 ANKRD36BQ8N2N9 1353 aa18.27■□□□□ 0.52
CNTNAP3B-214ENST00000618777 PIK3R4Q99570 1358 aa18.27■□□□□ 0.52
CNTNAP3B-214ENST00000618777 EVI5O60447 810 aa18.27■□□□□ 0.52
CNTNAP3B-214ENST00000618777 BAG2O95816 211 aa18.27■□□□□ 0.52
CNTNAP3B-214ENST00000618777 GAS8O95995 478 aa18.27■□□□□ 0.52
CNTNAP3B-214ENST00000618777 PNMA6AP0CW24 399 aaPredicted RBP18.27■□□□□ 0.52
CNTNAP3B-214ENST00000618777 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.27■□□□□ 0.52
CNTNAP3B-214ENST00000618777 CFTRP13569 1480 aa18.27■□□□□ 0.52
CNTNAP3B-214ENST00000618777 LRMPQ12912 555 aa18.27■□□□□ 0.51
CNTNAP3B-214ENST00000618777 CAPRIN2Q6IMN6 1127 aaKnown RBP18.27■□□□□ 0.51
CNTNAP3B-214ENST00000618777 WIZO95785 1651 aa18.27■□□□□ 0.51
CNTNAP3B-214ENST00000618777 SF3A3Q12874 501 aaKnown RBP eCLIP18.27■□□□□ 0.51
CNTNAP3B-214ENST00000618777 MSANTD4Q8NCY6 345 aa18.27■□□□□ 0.51
CNTNAP3B-214ENST00000618777 HVCN1Q96D96 273 aa18.27■□□□□ 0.51
CNTNAP3B-214ENST00000618777 DTNBP1Q96EV8 351 aa18.27■□□□□ 0.51
CNTNAP3B-214ENST00000618777 ASIC3Q9UHC3 531 aa18.27■□□□□ 0.51
CNTNAP3B-214ENST00000618777 CTNND2Q9UQB3 1225 aa18.27■□□□□ 0.51
CNTNAP3B-214ENST00000618777 RPL13P26373 211 aaKnown RBP18.26■□□□□ 0.51
CNTNAP3B-214ENST00000618777 DCTPP1Q9H773 170 aa18.26■□□□□ 0.51
CNTNAP3B-214ENST00000618777 SYNRGQ9UMZ2 1314 aa18.26■□□□□ 0.51
CNTNAP3B-214ENST00000618777 VPS41P49754 854 aa18.26■□□□□ 0.51
CNTNAP3B-214ENST00000618777 SESN3P58005 492 aa18.26■□□□□ 0.51
CNTNAP3B-214ENST00000618777 MTX1Q13505 466 aa18.26■□□□□ 0.51
CNTNAP3B-214ENST00000618777 CLCN6P51797 869 aa18.26■□□□□ 0.51
CNTNAP3B-214ENST00000618777 RPS6KA1Q15418 735 aa18.26■□□□□ 0.51
CNTNAP3B-214ENST00000618777 DHX32Q7L7V1 743 aaKnown RBP18.26■□□□□ 0.51
CNTNAP3B-214ENST00000618777 CCHCR1Q8TD31 782 aa18.26■□□□□ 0.51
CNTNAP3B-214ENST00000618777 BICC1Q9H694 974 aaKnown RBP18.26■□□□□ 0.51
CNTNAP3B-214ENST00000618777 ERBB4Q15303 1308 aa18.26■□□□□ 0.51
CNTNAP3B-214ENST00000618777 TTC41PQ6P2S7 1318 aa18.26■□□□□ 0.51
CNTNAP3B-214ENST00000618777 SNRKQ9NRH2 765 aa18.26■□□□□ 0.51
CNTNAP3B-214ENST00000618777 SAMM50Q9Y512 469 aa18.26■□□□□ 0.51
CNTNAP3B-214ENST00000618777 ARHGAP42A6NI28 874 aa18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 KRT2P35908 639 aa18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 FBXO38Q6PIJ6 1188 aa18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 CFAP61Q8NHU2 1237 aa18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 CXorf38Q8TB03 319 aa18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 SLF1Q9BQI6 1058 aa18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 IFIT1BQ5T764 474 aaKnown RBP18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 TEX11Q8IYF3 940 aa18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 SYCE1Q8N0S2 351 aa18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 CCT6BQ92526 530 aa18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 MEIS3Q99687 375 aa18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 NOP53Q9NZM5 478 aaKnown RBP18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 WWC3Q9ULE0 1092 aa18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 HMGB1P1B2RPK0 211 aaPredicted RBP18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 NFE2L3Q9Y4A8 694 aa18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 FAM13AO94988 1023 aa18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 ANKRD42Q8N9B4 389 aa18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 RILPQ96NA2 401 aa18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 KCNH3Q9ULD8 1083 aa18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 MORC2Q9Y6X9 1032 aaPredicted RBP18.25■□□□□ 0.51
CNTNAP3B-214ENST00000618777 STARD3NLO95772 234 aa18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 ZNF513Q8N8E2 541 aaPredicted RBP18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 CCDC197Q8NCU1 140 aa18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 MBIPQ9NS73 344 aa18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 PSDA5PKW4 1024 aaPredicted RBP18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 RWDD2BP57060 319 aa18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 ITIH3Q06033 890 aa18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 NCBP1Q09161 790 aaKnown RBP18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 GNPTABQ3T906 1256 aa18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 DTHD1Q6ZMT9 781 aa18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 SLF2Q8IX21 1173 aa18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 MRRFQ96E11 262 aaKnown RBP18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 IGF1RP08069 1367 aa18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 CHMLP26374 656 aa18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 ELF1P32519 619 aa18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 ATP8B2P98198 1209 aa18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 FBXO41Q8TF61 875 aa18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 ANKRD65E5RJM6 399 aa18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 SUN1O94901 812 aa18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 TNFAIP3P21580 790 aa18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 PPARDQ03181 441 aa18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 PLEKHM2Q8IWE5 1019 aa18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 C16orf71Q8IYS4 520 aaPredicted RBP18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 MGARPQ8TDB4 240 aa18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 XPO4Q9C0E2 1151 aaKnown RBP18.24■□□□□ 0.51
CNTNAP3B-214ENST00000618777 APOBRQ0VD83 1088 aa18.23■□□□□ 0.51
CNTNAP3B-214ENST00000618777 NMIQ13287 307 aaPredicted RBP18.23■□□□□ 0.51
CNTNAP3B-214ENST00000618777 CALM1P0DP23 149 aa18.23■□□□□ 0.51
CNTNAP3B-214ENST00000618777 CALM2P0DP24 149 aa18.23■□□□□ 0.51
CNTNAP3B-214ENST00000618777 CALM3P0DP25 149 aa18.23■□□□□ 0.51
CNTNAP3B-214ENST00000618777 ASIC2Q16515 512 aa18.23■□□□□ 0.51
CNTNAP3B-214ENST00000618777 GEN1Q17RS7 908 aa18.23■□□□□ 0.51
CNTNAP3B-214ENST00000618777 SRLQ86TD4 932 aa18.23■□□□□ 0.51
CNTNAP3B-214ENST00000618777 TRIM58Q8NG06 486 aa18.23■□□□□ 0.51
CNTNAP3B-214ENST00000618777 P3H4Q92791 437 aa18.23■□□□□ 0.51
CNTNAP3B-214ENST00000618777 IQCDQ96DY2 449 aa18.23■□□□□ 0.51
CNTNAP3B-214ENST00000618777 PLEKHA4Q9H4M7 779 aa18.23■□□□□ 0.51
CNTNAP3B-214ENST00000618777 ADAM21Q9UKJ8 722 aa18.23■□□□□ 0.51
CNTNAP3B-214ENST00000618777 TRIM35Q9UPQ4 493 aa18.23■□□□□ 0.51
CNTNAP3B-214ENST00000618777 RILPL1Q5EBL4 403 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms