RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 ARHGAP27Q6ZUM4 889 aa6.18□□□□□ -1.42
TARDBP-220ENST00000618606 LRRC56Q8IYG6 542 aaPredicted RBP6.18□□□□□ -1.42
TARDBP-220ENST00000618606 DUSP23Q9BVJ7 150 aa6.18□□□□□ -1.42
TARDBP-220ENST00000618606 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.17□□□□□ -1.42
TARDBP-220ENST00000618606 LEFTY1O75610 366 aa6.17□□□□□ -1.42
TARDBP-220ENST00000618606 NEFLP07196 543 aa6.17□□□□□ -1.42
TARDBP-220ENST00000618606 SLFN14P0C7P3 912 aa6.17□□□□□ -1.42
TARDBP-220ENST00000618606 LIG1P18858 919 aa6.17□□□□□ -1.42
TARDBP-220ENST00000618606 WDR89Q96FK6 387 aaPredicted RBP6.17□□□□□ -1.42
TARDBP-220ENST00000618606 DISC1Q9NRI5 854 aa6.17□□□□□ -1.42
TARDBP-220ENST00000618606 RAPGEFL1Q9UHV5 662 aa6.17□□□□□ -1.42
TARDBP-220ENST00000618606 B8ZZF3 427 aa6.16□□□□□ -1.42
TARDBP-220ENST00000618606 PTPN12Q05209 780 aaKnown RBP6.16□□□□□ -1.42
TARDBP-220ENST00000618606 USPL1Q5W0Q7 1092 aa6.16□□□□□ -1.42
TARDBP-220ENST00000618606 ANKLE2Q86XL3 938 aa6.16□□□□□ -1.42
TARDBP-220ENST00000618606 KRTAP9-3Q9BYQ3 159 aa6.16□□□□□ -1.42
TARDBP-220ENST00000618606 CCDC86Q9H6F5 360 aaKnown RBP6.16□□□□□ -1.42
TARDBP-220ENST00000618606 PCOLCE2Q9UKZ9 415 aa6.16□□□□□ -1.42
TARDBP-220ENST00000618606 BRPF3Q9ULD4 1205 aa6.16□□□□□ -1.42
TARDBP-220ENST00000618606 USTQ9Y2C2 406 aa6.16□□□□□ -1.42
TARDBP-220ENST00000618606 PCDHGC5Q9Y5F6 944 aa6.16□□□□□ -1.42
TARDBP-220ENST00000618606 ZSCAN22P10073 491 aaPredicted RBP6.15□□□□□ -1.42
TARDBP-220ENST00000618606 ARHGAP4P98171 946 aa6.15□□□□□ -1.42
TARDBP-220ENST00000618606 KIF4BQ2VIQ3 1234 aa6.15□□□□□ -1.42
TARDBP-220ENST00000618606 TTLL10Q6ZVT0 673 aa6.15□□□□□ -1.42
TARDBP-220ENST00000618606 ASB11Q8WXH4 323 aa6.15□□□□□ -1.42
TARDBP-220ENST00000618606 LIN37Q96GY3 246 aaPredicted RBP6.15□□□□□ -1.42
TARDBP-220ENST00000618606 PRDM7Q9NQW5 492 aa6.15□□□□□ -1.42
TARDBP-220ENST00000618606 CTNND2Q9UQB3 1225 aa6.15□□□□□ -1.42
TARDBP-220ENST00000618606 TTLL4Q14679 1199 aa6.14□□□□□ -1.43
TARDBP-220ENST00000618606 B4GALNT3Q6L9W6 998 aa6.14□□□□□ -1.43
TARDBP-220ENST00000618606 SYDE1Q6ZW31 735 aaPredicted RBP6.14□□□□□ -1.43
TARDBP-220ENST00000618606 CITED4Q96RK1 184 aa6.14□□□□□ -1.43
TARDBP-220ENST00000618606 FAM129BQ96TA1 746 aa6.14□□□□□ -1.43
TARDBP-220ENST00000618606 KRT82Q9NSB4 513 aa6.14□□□□□ -1.43
TARDBP-220ENST00000618606 LMCD1Q9NZU5 365 aa6.14□□□□□ -1.43
TARDBP-220ENST00000618606 ZNF862O60290 1169 aa6.13□□□□□ -1.43
TARDBP-220ENST00000618606 RNGTTO60942 597 aaKnown RBP6.13□□□□□ -1.43
TARDBP-220ENST00000618606 CPNE3O75131 537 aaKnown RBP6.13□□□□□ -1.43
TARDBP-220ENST00000618606 IGHA2P01877 340 aa6.13□□□□□ -1.43
TARDBP-220ENST00000618606 KRT1P04264 644 aa6.13□□□□□ -1.43
TARDBP-220ENST00000618606 AFMP43652 599 aa6.13□□□□□ -1.43
TARDBP-220ENST00000618606 SERPINB4P48594 390 aa6.13□□□□□ -1.43
TARDBP-220ENST00000618606 HNRNPUQ00839 825 aaKnown RBP eCLIP6.13□□□□□ -1.43
TARDBP-220ENST00000618606 ZP2Q05996 745 aa6.13□□□□□ -1.43
TARDBP-220ENST00000618606 PDE3BQ13370 1112 aa6.13□□□□□ -1.43
TARDBP-220ENST00000618606 RPS26P11Q5JNZ5 115 aaPredicted RBP6.13□□□□□ -1.43
TARDBP-220ENST00000618606 GLYCTKQ8IVS8 523 aa6.13□□□□□ -1.43
TARDBP-220ENST00000618606 HEXIM2Q96MH2 286 aaKnown RBP6.13□□□□□ -1.43
TARDBP-220ENST00000618606 H3BRB1 525 aa6.12□□□□□ -1.43
TARDBP-220ENST00000618606 GLI1P08151 1106 aa6.12□□□□□ -1.43
TARDBP-220ENST00000618606 HCLS1P14317 486 aaPredicted RBP6.12□□□□□ -1.43
TARDBP-220ENST00000618606 ITIH2P19823 946 aa6.12□□□□□ -1.43
TARDBP-220ENST00000618606 ORC1Q13415 861 aa6.12□□□□□ -1.43
TARDBP-220ENST00000618606 IKZF1Q13422 519 aa6.12□□□□□ -1.43
TARDBP-220ENST00000618606 FYB2Q5VWT5 728 aa6.12□□□□□ -1.43
TARDBP-220ENST00000618606 FAM214BQ7L5A3 538 aa6.12□□□□□ -1.43
TARDBP-220ENST00000618606 AMIGO3Q86WK7 504 aa6.12□□□□□ -1.43
TARDBP-220ENST00000618606 EHD4Q9H223 541 aa6.12□□□□□ -1.43
TARDBP-220ENST00000618606 TUT1Q9H6E5 874 aaKnown RBP6.12□□□□□ -1.43
TARDBP-220ENST00000618606 IGF2BP3O00425 579 aaKnown RBP eCLIP6.11□□□□□ -1.43
TARDBP-220ENST00000618606 NDUFB5O43674 189 aa6.11□□□□□ -1.43
TARDBP-220ENST00000618606 C1QTNF9P0C862 333 aa6.11□□□□□ -1.43
TARDBP-220ENST00000618606 PRR23BQ6ZRT6 265 aa6.11□□□□□ -1.43
TARDBP-220ENST00000618606 TOP6BLQ8N6T0 577 aa6.11□□□□□ -1.43
TARDBP-220ENST00000618606 ZC3H12CQ9C0D7 883 aaKnown RBP6.11□□□□□ -1.43
TARDBP-220ENST00000618606 DNAJC25Q9H1X3 360 aa6.11□□□□□ -1.43
TARDBP-220ENST00000618606 NEFMP07197 916 aa6.1□□□□□ -1.43
TARDBP-220ENST00000618606 GSTP1P09211 210 aaKnown RBP6.1□□□□□ -1.43
TARDBP-220ENST00000618606 BUD31P41223 144 aaPredicted RBP6.1□□□□□ -1.43
TARDBP-220ENST00000618606 PRPF40BQ6NWY9 871 aaKnown RBP6.1□□□□□ -1.43
TARDBP-220ENST00000618606 TXNDC2Q86VQ3 553 aa6.1□□□□□ -1.43
TARDBP-220ENST00000618606 SPACA3Q8IXA5 215 aa6.1□□□□□ -1.43
TARDBP-220ENST00000618606 CCDC74AQ96AQ1 378 aa6.1□□□□□ -1.43
TARDBP-220ENST00000618606 KRTAP17-1Q9BYP8 105 aa6.1□□□□□ -1.43
TARDBP-220ENST00000618606 ABCB6Q9NP58 842 aa6.1□□□□□ -1.43
TARDBP-220ENST00000618606 NPHS2Q9NP85 383 aa6.1□□□□□ -1.43
TARDBP-220ENST00000618606 GTF2IRD1Q9UHL9 959 aa6.1□□□□□ -1.43
TARDBP-220ENST00000618606 TMEM238LA0A1B0GVL6 79 aa6.09□□□□□ -1.43
TARDBP-220ENST00000618606 NFIBO00712 420 aa6.09□□□□□ -1.43
TARDBP-220ENST00000618606 EIF1AYO14602 144 aaKnown RBP6.09□□□□□ -1.43
TARDBP-220ENST00000618606 MPZL3Q6UWV2 235 aa6.09□□□□□ -1.43
TARDBP-220ENST00000618606 ISL2Q96A47 359 aa6.09□□□□□ -1.43
TARDBP-220ENST00000618606 KIRREL1Q96J84 757 aa6.09□□□□□ -1.43
TARDBP-220ENST00000618606 FAAP100Q0VG06 881 aa6.08□□□□□ -1.44
TARDBP-220ENST00000618606 NKPD1Q17RQ9 610 aa6.08□□□□□ -1.44
TARDBP-220ENST00000618606 CYFIP1Q7L576 1253 aa6.08□□□□□ -1.44
TARDBP-220ENST00000618606 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.08□□□□□ -1.44
TARDBP-220ENST00000618606 FBXO15Q8NCQ5 510 aaPredicted RBP6.08□□□□□ -1.44
TARDBP-220ENST00000618606 RNF214Q8ND24 703 aa6.08□□□□□ -1.44
TARDBP-220ENST00000618606 NIF3L1Q9GZT8 377 aa6.08□□□□□ -1.44
TARDBP-220ENST00000618606 PITPNM2Q9BZ72 1349 aa6.07□□□□□ -1.44
TARDBP-220ENST00000618606 GPR182O15218 404 aa6.07□□□□□ -1.44
TARDBP-220ENST00000618606 CLCN7P51798 805 aa6.07□□□□□ -1.44
TARDBP-220ENST00000618606 ERVK-24P63145 666 aa6.07□□□□□ -1.44
TARDBP-220ENST00000618606 ZC3H12AQ5D1E8 599 aaKnown RBP6.07□□□□□ -1.44
TARDBP-220ENST00000618606 TMEM67Q5HYA8 995 aa6.07□□□□□ -1.44
TARDBP-220ENST00000618606 ALKBH8Q96BT7 664 aaKnown RBP6.07□□□□□ -1.44
TARDBP-220ENST00000618606 SSU72Q9NP77 194 aaKnown RBP6.07□□□□□ -1.44
TARDBP-220ENST00000618606 ZNF157P51786 506 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms