RNA–Protein interactions for RNA: ENST00000617022.4

DDB2-212, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 2,181 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-212ENST00000617022 TNPO1Q92973 898 aaKnown RBP18.85■□□□□ 0.61
DDB2-212ENST00000617022 LAMA4Q16363 1823 aa18.84■□□□□ 0.61
DDB2-212ENST00000617022 RBM10P98175 930 aaKnown RBP18.84■□□□□ 0.61
DDB2-212ENST00000617022 CTDSPL2Q05D32 466 aa18.84■□□□□ 0.61
DDB2-212ENST00000617022 LARP6Q9BRS8 491 aaKnown RBP18.84■□□□□ 0.61
DDB2-212ENST00000617022 DCP1AQ9NPI6 582 aaPredicted RBP18.84■□□□□ 0.61
DDB2-212ENST00000617022 ADAMTSL1Q8N6G6 1762 aa18.84■□□□□ 0.61
DDB2-212ENST00000617022 ARFGEF1Q9Y6D6 1849 aa18.84■□□□□ 0.61
DDB2-212ENST00000617022 MSNP26038 577 aaKnown RBP18.83■□□□□ 0.61
DDB2-212ENST00000617022 SYT17Q9BSW7 474 aa18.83■□□□□ 0.61
DDB2-212ENST00000617022 BAZ2AQ9UIF9 1905 aaKnown RBP18.83■□□□□ 0.61
DDB2-212ENST00000617022 ZNRF3Q9ULT6 936 aa18.83■□□□□ 0.61
DDB2-212ENST00000617022 MINDY4BA8MYZ0 360 aa18.83■□□□□ 0.6
DDB2-212ENST00000617022 SMIM22K7EJ46 135 aa18.83■□□□□ 0.6
DDB2-212ENST00000617022 PSMD14O00487 310 aa18.83■□□□□ 0.6
DDB2-212ENST00000617022 STK11IPQ8N1F8 1099 aa18.83■□□□□ 0.6
DDB2-212ENST00000617022 ANP32BQ92688 251 aaKnown RBP18.83■□□□□ 0.6
DDB2-212ENST00000617022 CYP2D7A0A087X1C5 515 aa18.82■□□□□ 0.6
DDB2-212ENST00000617022 USP5P45974 858 aa18.82■□□□□ 0.6
DDB2-212ENST00000617022 RAB3GAP1Q15042 981 aa18.82■□□□□ 0.6
DDB2-212ENST00000617022 TGFBRAP1Q8WUH2 860 aa18.82■□□□□ 0.6
DDB2-212ENST00000617022 TEKT1Q969V4 418 aa18.82■□□□□ 0.6
DDB2-212ENST00000617022 INCENPQ9NQS7 918 aa18.82■□□□□ 0.6
DDB2-212ENST00000617022 ATP8A2Q9NTI2 1148 aa18.82■□□□□ 0.6
DDB2-212ENST00000617022 PSME4Q14997 1843 aa18.82■□□□□ 0.6
DDB2-212ENST00000617022 MCM2P49736 904 aa18.82■□□□□ 0.6
DDB2-212ENST00000617022 PRELPP51888 382 aa18.82■□□□□ 0.6
DDB2-212ENST00000617022 RHBDL3P58872 404 aa18.82■□□□□ 0.6
DDB2-212ENST00000617022 GIMAP6Q6P9H5 292 aa18.82■□□□□ 0.6
DDB2-212ENST00000617022 JDP2Q8WYK2 163 aa18.82■□□□□ 0.6
DDB2-212ENST00000617022 LRRC2Q9BYS8 371 aa18.82■□□□□ 0.6
DDB2-212ENST00000617022 USP17L12C9JPN9 530 aa18.81■□□□□ 0.6
DDB2-212ENST00000617022 USP17L21D6R901 530 aa18.81■□□□□ 0.6
DDB2-212ENST00000617022 CRKP46108 304 aa18.81■□□□□ 0.6
DDB2-212ENST00000617022 NASPP49321 788 aaPredicted RBP18.81■□□□□ 0.6
DDB2-212ENST00000617022 PPARAQ07869 468 aa18.81■□□□□ 0.6
DDB2-212ENST00000617022 CTR9Q6PD62 1173 aa18.81■□□□□ 0.6
DDB2-212ENST00000617022 CHST3Q7LGC8 479 aa18.81■□□□□ 0.6
DDB2-212ENST00000617022 TEX11Q8IYF3 940 aa18.81■□□□□ 0.6
DDB2-212ENST00000617022 FOXD4L1Q9NU39 408 aa18.81■□□□□ 0.6
DDB2-212ENST00000617022 PCDHAC2Q9Y5I4 1007 aa18.81■□□□□ 0.6
DDB2-212ENST00000617022 TACC3Q9Y6A5 838 aa18.81■□□□□ 0.6
DDB2-212ENST00000617022 NEDD4P46934 1319 aa18.81■□□□□ 0.6
DDB2-212ENST00000617022 LTBP3Q9NS15 1303 aa18.81■□□□□ 0.6
DDB2-212ENST00000617022 HMGB1P09429 215 aaKnown RBP18.81■□□□□ 0.6
DDB2-212ENST00000617022 EVX2Q03828 476 aa18.81■□□□□ 0.6
DDB2-212ENST00000617022 SLC4A8Q2Y0W8 1093 aa18.81■□□□□ 0.6
DDB2-212ENST00000617022 RSBN1LQ6PCB5 846 aaPredicted RBP18.81■□□□□ 0.6
DDB2-212ENST00000617022 HHIPL2Q6UWX4 724 aa18.81■□□□□ 0.6
DDB2-212ENST00000617022 DHX32Q7L7V1 743 aaKnown RBP18.81■□□□□ 0.6
DDB2-212ENST00000617022 NCOA7Q8NI08 942 aa18.81■□□□□ 0.6
DDB2-212ENST00000617022 NKX2-3Q8TAU0 364 aa18.81■□□□□ 0.6
DDB2-212ENST00000617022 TMX3Q96JJ7 454 aa18.81■□□□□ 0.6
DDB2-212ENST00000617022 ZBTB12Q9Y330 459 aaPredicted RBP18.81■□□□□ 0.6
DDB2-212ENST00000617022 VIL1P09327 827 aaKnown RBP18.8■□□□□ 0.6
DDB2-212ENST00000617022 PLCG2P16885 1265 aa18.8■□□□□ 0.6
DDB2-212ENST00000617022 RALYLQ86SE5 291 aaKnown RBP18.8■□□□□ 0.6
DDB2-212ENST00000617022 CERS3Q8IU89 383 aa18.8■□□□□ 0.6
DDB2-212ENST00000617022 MAPKAPK5Q8IW41 473 aa18.8■□□□□ 0.6
DDB2-212ENST00000617022 MCM9Q9NXL9 1143 aa18.8■□□□□ 0.6
DDB2-212ENST00000617022 MKRN1Q9UHC7 482 aaKnown RBP18.8■□□□□ 0.6
DDB2-212ENST00000617022 TIAM2Q8IVF5 1701 aa18.8■□□□□ 0.6
DDB2-212ENST00000617022 RBM5P52756 815 aaKnown RBP eCLIP18.79■□□□□ 0.61e-6■■■■□ 26.4
DDB2-212ENST00000617022 CXCL9Q07325 125 aa18.79■□□□□ 0.6
DDB2-212ENST00000617022 TRDNQ13061 729 aa18.79■□□□□ 0.6
DDB2-212ENST00000617022 ZNF500O60304 480 aaPredicted RBP18.79■□□□□ 0.6
DDB2-212ENST00000617022 USP17L8P0C7I0 530 aa18.79■□□□□ 0.6
DDB2-212ENST00000617022 CYP2D6P10635 497 aa18.79■□□□□ 0.6
DDB2-212ENST00000617022 TOB2Q14106 344 aaPredicted RBP18.79■□□□□ 0.6
DDB2-212ENST00000617022 AKNAD1Q5T1N1 836 aa18.79■□□□□ 0.6
DDB2-212ENST00000617022 APOBEC3HQ6NTF7 200 aaKnown RBP18.79■□□□□ 0.6
DDB2-212ENST00000617022 Q6ZUG5 572 aa18.79■□□□□ 0.6
DDB2-212ENST00000617022 MB21D2Q8IYB1 491 aaPredicted RBP18.79■□□□□ 0.6
DDB2-212ENST00000617022 CDK5RAP2Q96SN8 1893 aa18.78■□□□□ 0.6
DDB2-212ENST00000617022 EXOSC10Q01780 885 aaKnown RBP18.78■□□□□ 0.6
DDB2-212ENST00000617022 ARHGAP27Q6ZUM4 889 aa18.78■□□□□ 0.6
DDB2-212ENST00000617022 ARPP21Q9UBL0 812 aaPredicted RBP18.78■□□□□ 0.6
DDB2-212ENST00000617022 MYO3BQ8WXR4 1341 aa18.78■□□□□ 0.6
DDB2-212ENST00000617022 B4E1Z4 1266 aa18.78■□□□□ 0.6
DDB2-212ENST00000617022 MFSD6Q6ZSS7 791 aa18.78■□□□□ 0.6
DDB2-212ENST00000617022 STAG1Q8WVM7 1258 aa18.78■□□□□ 0.6
DDB2-212ENST00000617022 ZDHHC15Q96MV8 337 aa18.78■□□□□ 0.6
DDB2-212ENST00000617022 TOMM22Q9NS69 142 aa18.78■□□□□ 0.6
DDB2-212ENST00000617022 USP40Q9NVE5 1235 aa18.78■□□□□ 0.6
DDB2-212ENST00000617022 ANAPC4Q9UJX5 808 aa18.78■□□□□ 0.6
DDB2-212ENST00000617022 LIMCH1Q9UPQ0 1083 aa18.78■□□□□ 0.6
DDB2-212ENST00000617022 FLT1P17948 1338 aa18.77■□□□□ 0.6
DDB2-212ENST00000617022 NAV1Q8NEY1 1877 aa18.77■□□□□ 0.6
DDB2-212ENST00000617022 LARGE1O95461 756 aa18.77■□□□□ 0.6
DDB2-212ENST00000617022 FGD1P98174 961 aa18.77■□□□□ 0.6
DDB2-212ENST00000617022 HDLBPQ00341 1268 aaKnown RBP18.77■□□□□ 0.6
DDB2-212ENST00000617022 CIAPIN1Q6FI81 312 aa18.77■□□□□ 0.6
DDB2-212ENST00000617022 CDC42EP5Q6NZY7 148 aa18.77■□□□□ 0.6
DDB2-212ENST00000617022 GMLQ99445 158 aa18.77■□□□□ 0.6
DDB2-212ENST00000617022 MRIQ9BWK5 157 aa18.77■□□□□ 0.6
DDB2-212ENST00000617022 SAP30BPQ9UHR5 308 aaKnown RBP18.77■□□□□ 0.6
DDB2-212ENST00000617022 SERPINA10Q9UK55 444 aa18.77■□□□□ 0.6
DDB2-212ENST00000617022 MCM5P33992 734 aa18.76■□□□□ 0.59
DDB2-212ENST00000617022 ANTXR2P58335 489 aa18.76■□□□□ 0.59
DDB2-212ENST00000617022 PICALMQ13492 652 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms