RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 CCDC152Q4G0S7 254 aa16.09■□□□□ 0.17
CACNA1C-231ENST00000616390 MFSD6Q6ZSS7 791 aa16.09■□□□□ 0.17
CACNA1C-231ENST00000616390 BRAPQ7Z569 592 aa16.09■□□□□ 0.17
CACNA1C-231ENST00000616390 SDR42E1Q8WUS8 393 aa16.09■□□□□ 0.17
CACNA1C-231ENST00000616390 CLIC6Q96NY7 704 aa16.09■□□□□ 0.17
CACNA1C-231ENST00000616390 LY9Q9HBG7 655 aa16.09■□□□□ 0.17
CACNA1C-231ENST00000616390 DYNC1I1O14576 645 aa16.09■□□□□ 0.17
CACNA1C-231ENST00000616390 GYG1P46976 350 aa16.09■□□□□ 0.17
CACNA1C-231ENST00000616390 CHRNDQ07001 517 aa16.09■□□□□ 0.17
CACNA1C-231ENST00000616390 TRIM29Q14134 588 aa16.09■□□□□ 0.17
CACNA1C-231ENST00000616390 SPECC1Q5M775 1068 aa16.09■□□□□ 0.17
CACNA1C-231ENST00000616390 MARCH10Q8NA82 808 aaPredicted RBP16.09■□□□□ 0.17
CACNA1C-231ENST00000616390 MYRIPQ8NFW9 859 aa16.09■□□□□ 0.17
CACNA1C-231ENST00000616390 POLR3EQ9NVU0 708 aa16.09■□□□□ 0.17
CACNA1C-231ENST00000616390 DISP2A7MBM2 1401 aa16.08■□□□□ 0.17
CACNA1C-231ENST00000616390 NHSL1Q5SYE7 1610 aa16.08■□□□□ 0.17
CACNA1C-231ENST00000616390 GSG1L2A8MUP6 293 aa16.08■□□□□ 0.16
CACNA1C-231ENST00000616390 RANBP6O60518 1105 aaKnown RBP16.08■□□□□ 0.16
CACNA1C-231ENST00000616390 PFKFB1P16118 471 aa16.08■□□□□ 0.16
CACNA1C-231ENST00000616390 CCDC24Q8N4L8 307 aa16.08■□□□□ 0.16
CACNA1C-231ENST00000616390 SLC3A2P08195 630 aaKnown RBP16.08■□□□□ 0.16
CACNA1C-231ENST00000616390 GUCY1A2P33402 732 aa16.08■□□□□ 0.16
CACNA1C-231ENST00000616390 RAI14Q9P0K7 980 aa16.08■□□□□ 0.16
CACNA1C-231ENST00000616390 KIAA1468Q9P260 1216 aa16.08■□□□□ 0.16
CACNA1C-231ENST00000616390 KCNJ14Q9UNX9 436 aa16.08■□□□□ 0.16
CACNA1C-231ENST00000616390 TAF1P21675 1872 aa16.08■□□□□ 0.16
CACNA1C-231ENST00000616390 CAMTA2O94983 1202 aa16.07■□□□□ 0.16
CACNA1C-231ENST00000616390 CHAF1AQ13111 956 aaPredicted RBP16.07■□□□□ 0.16
CACNA1C-231ENST00000616390 DOT1LQ8TEK3 1739 aa16.07■□□□□ 0.16
CACNA1C-231ENST00000616390 MROH7-TTC4A0A0A0MT08 1334 aa16.07■□□□□ 0.16
CACNA1C-231ENST00000616390 CDKL5O76039 1030 aa16.07■□□□□ 0.16
CACNA1C-231ENST00000616390 YEATS4O95619 227 aa16.07■□□□□ 0.16
CACNA1C-231ENST00000616390 CYP7A1P22680 504 aa16.07■□□□□ 0.16
CACNA1C-231ENST00000616390 TMEM87BQ96K49 555 aa16.07■□□□□ 0.16
CACNA1C-231ENST00000616390 SSRP1Q08945 709 aaKnown RBP16.06■□□□□ 0.16
CACNA1C-231ENST00000616390 AKNAD1Q5T1N1 836 aa16.06■□□□□ 0.16
CACNA1C-231ENST00000616390 FAM217BQ9NTX9 383 aaPredicted RBP16.06■□□□□ 0.16
CACNA1C-231ENST00000616390 SMC2O95347 1197 aa16.06■□□□□ 0.16
CACNA1C-231ENST00000616390 ADGRA1Q86SQ6 560 aa16.06■□□□□ 0.16
CACNA1C-231ENST00000616390 NAT10Q9H0A0 1025 aaKnown RBP16.06■□□□□ 0.16
CACNA1C-231ENST00000616390 MYH14Q7Z406 1995 aaKnown RBP16.06■□□□□ 0.16
CACNA1C-231ENST00000616390 A0A1W2PQ27 194 aa16.05■□□□□ 0.16
CACNA1C-231ENST00000616390 A0A1W2PQ64 194 aa16.05■□□□□ 0.16
CACNA1C-231ENST00000616390 A0A1W2PQD8 194 aa16.05■□□□□ 0.16
CACNA1C-231ENST00000616390 CAVIN2O95810 425 aa16.05■□□□□ 0.16
CACNA1C-231ENST00000616390 TPD52L1Q16890 204 aaPredicted RBP16.05■□□□□ 0.16
CACNA1C-231ENST00000616390 AXDND1Q5T1B0 1012 aaPredicted RBP16.05■□□□□ 0.16
CACNA1C-231ENST00000616390 C3orf67Q6ZVT6 689 aa16.05■□□□□ 0.16
CACNA1C-231ENST00000616390 PRIMPOLQ96LW4 560 aa16.05■□□□□ 0.16
CACNA1C-231ENST00000616390 NACAP1Q9BZK3 213 aa16.05■□□□□ 0.16
CACNA1C-231ENST00000616390 hCG_1642624A0A1W2PR95 340 aa16.05■□□□□ 0.16
CACNA1C-231ENST00000616390 RIOK3O14730 519 aaKnown RBP16.05■□□□□ 0.16
CACNA1C-231ENST00000616390 SYKP43405 635 aa16.05■□□□□ 0.16
CACNA1C-231ENST00000616390 NTRK3Q16288 839 aa16.05■□□□□ 0.16
CACNA1C-231ENST00000616390 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.05■□□□□ 0.16
CACNA1C-231ENST00000616390 C4AP0C0L4 1744 aa16.05■□□□□ 0.16
CACNA1C-231ENST00000616390 C4BP0C0L5 1744 aa16.05■□□□□ 0.16
CACNA1C-231ENST00000616390 BAZ2BQ9UIF8 2168 aaKnown RBP16.05■□□□□ 0.16
CACNA1C-231ENST00000616390 CYP2D7A0A087X1C5 515 aa16.04■□□□□ 0.16
CACNA1C-231ENST00000616390 BTBD18B2RXH4 712 aa16.04■□□□□ 0.16
CACNA1C-231ENST00000616390 NTSR2O95665 410 aa16.04■□□□□ 0.16
CACNA1C-231ENST00000616390 WTAPQ15007 396 aa16.04■□□□□ 0.16
CACNA1C-231ENST00000616390 SLC39A14Q15043 492 aa16.04■□□□□ 0.16
CACNA1C-231ENST00000616390 ERFEQ4G0M1 354 aa16.04■□□□□ 0.16
CACNA1C-231ENST00000616390 PSMD1Q99460 953 aa16.04■□□□□ 0.16
CACNA1C-231ENST00000616390 TRMT1Q9NXH9 659 aaKnown RBP16.04■□□□□ 0.16
CACNA1C-231ENST00000616390 WDR19Q8NEZ3 1342 aa16.04■□□□□ 0.16
CACNA1C-231ENST00000616390 CHD4Q14839 1912 aa16.04■□□□□ 0.16
CACNA1C-231ENST00000616390 ERICH2A1L162 156 aa16.04■□□□□ 0.16
CACNA1C-231ENST00000616390 LRRC8AQ8IWT6 810 aa16.04■□□□□ 0.16
CACNA1C-231ENST00000616390 ZNF622Q969S3 477 aaKnown RBP eCLIP16.04■□□□□ 0.16
CACNA1C-231ENST00000616390 JAG2Q9Y219 1238 aa16.04■□□□□ 0.16
CACNA1C-231ENST00000616390 PRDM1O75626 825 aa16.04■□□□□ 0.16
CACNA1C-231ENST00000616390 ATRNO75882 1429 aa16.04■□□□□ 0.16
CACNA1C-231ENST00000616390 PNOCQ13519 176 aa16.04■□□□□ 0.16
CACNA1C-231ENST00000616390 SLC4A8Q2Y0W8 1093 aa16.04■□□□□ 0.16
CACNA1C-231ENST00000616390 COL14A1Q05707 1796 aaKnown RBP16.03■□□□□ 0.16
CACNA1C-231ENST00000616390 SPATA31A1Q5TZJ5 1347 aa16.03■□□□□ 0.16
CACNA1C-231ENST00000616390 LMOD1P29536 600 aaPredicted RBP16.03■□□□□ 0.16
CACNA1C-231ENST00000616390 PIP4K2BP78356 416 aa16.03■□□□□ 0.16
CACNA1C-231ENST00000616390 PTPN21Q16825 1174 aa16.03■□□□□ 0.16
CACNA1C-231ENST00000616390 SHC4Q6S5L8 630 aa16.03■□□□□ 0.16
CACNA1C-231ENST00000616390 TNNT1P13805 278 aa16.03■□□□□ 0.16
CACNA1C-231ENST00000616390 CMA1P23946 247 aa16.03■□□□□ 0.16
CACNA1C-231ENST00000616390 DYNLL1P63167 89 aaKnown RBP16.03■□□□□ 0.16
CACNA1C-231ENST00000616390 PARP10Q53GL7 1025 aa16.03■□□□□ 0.16
CACNA1C-231ENST00000616390 HSP90AA4PQ58FG1 418 aa16.03■□□□□ 0.16
CACNA1C-231ENST00000616390 SMAP1Q8IYB5 467 aaPredicted RBP16.03■□□□□ 0.16
CACNA1C-231ENST00000616390 KRT23Q9C075 422 aa16.03■□□□□ 0.16
CACNA1C-231ENST00000616390 IFNKQ9P0W0 207 aa16.03■□□□□ 0.16
CACNA1C-231ENST00000616390 USP27XA6NNY8 438 aa16.02■□□□□ 0.16
CACNA1C-231ENST00000616390 SKILP12757 684 aa16.02■□□□□ 0.16
CACNA1C-231ENST00000616390 SART3Q15020 963 aaKnown RBP16.02■□□□□ 0.16
CACNA1C-231ENST00000616390 RTN1Q16799 776 aa16.02■□□□□ 0.16
CACNA1C-231ENST00000616390 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.02■□□□□ 0.16
CACNA1C-231ENST00000616390 NR5A1Q13285 461 aa16.02■□□□□ 0.15
CACNA1C-231ENST00000616390 ALX1Q15699 326 aa16.02■□□□□ 0.15
CACNA1C-231ENST00000616390 MRFAP1L1Q96HT8 127 aa16.02■□□□□ 0.15
CACNA1C-231ENST00000616390 UBAC1Q9BSL1 405 aa16.02■□□□□ 0.15
CACNA1C-231ENST00000616390 CNNM2Q9H8M5 875 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms