RNA–Protein interactions for RNA: ENST00000616369.4

WDR59-223, Transcript of WD repeat domain 59, human

TSL 1 (best) BASIC

Gene WDR59, Length 1,953 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR59-223	ENST00000616369	RRP12	Q5JTH9	1297 aa	Known RBP	13.4	□□□□□ -0.26
WDR59-223	ENST00000616369	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.4	□□□□□ -0.26
WDR59-223	ENST00000616369	SDF4	Q9BRK5	362 aa		13.4	□□□□□ -0.26
WDR59-223	ENST00000616369	GNL3L	Q9NVN8	582 aa	Known RBP	13.4	□□□□□ -0.26
WDR59-223	ENST00000616369	PYCARD	Q9ULZ3	195 aa		13.4	□□□□□ -0.26
WDR59-223	ENST00000616369	MYH2	Q9UKX2	1941 aa		13.4	□□□□□ -0.26
WDR59-223	ENST00000616369		A0A087WWV3	80 aa		13.4	□□□□□ -0.27
WDR59-223	ENST00000616369	WTIP	A6NIX2	430 aa	Predicted RBP	13.4	□□□□□ -0.27
WDR59-223	ENST00000616369	RGL2	O15211	777 aa		13.4	□□□□□ -0.27
WDR59-223	ENST00000616369	IFNAR1	P17181	557 aa		13.4	□□□□□ -0.27
WDR59-223	ENST00000616369	PTGS1	P23219	599 aa		13.4	□□□□□ -0.27
WDR59-223	ENST00000616369	U2AF2	P26368	475 aa	Known RBP eCLIP	13.4	□□□□□ -0.27	7e-7	■■□□□ 12
WDR59-223	ENST00000616369	SART3	Q15020	963 aa	Known RBP	13.4	□□□□□ -0.27
WDR59-223	ENST00000616369	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.4	□□□□□ -0.27
WDR59-223	ENST00000616369	SARM1	Q6SZW1	724 aa		13.4	□□□□□ -0.27
WDR59-223	ENST00000616369	ERCC4	Q92889	916 aa	Predicted RBP	13.4	□□□□□ -0.27
WDR59-223	ENST00000616369	ZKSCAN3	Q9BRR0	538 aa		13.4	□□□□□ -0.27
WDR59-223	ENST00000616369	MTA3	Q9BTC8	594 aa		13.4	□□□□□ -0.27
WDR59-223	ENST00000616369	TOMM22	Q9NS69	142 aa		13.4	□□□□□ -0.27
WDR59-223	ENST00000616369	MINPP1	Q9UNW1	487 aa		13.4	□□□□□ -0.27
WDR59-223	ENST00000616369	BTAF1	O14981	1849 aa		13.4	□□□□□ -0.27
WDR59-223	ENST00000616369	FMNL1	O95466	1100 aa	Predicted RBP	13.39	□□□□□ -0.27
WDR59-223	ENST00000616369	PIP4K2B	P78356	416 aa		13.39	□□□□□ -0.27
WDR59-223	ENST00000616369	PPARA	Q07869	468 aa		13.39	□□□□□ -0.27
WDR59-223	ENST00000616369	SSRP1	Q08945	709 aa	Known RBP	13.39	□□□□□ -0.27
WDR59-223	ENST00000616369	TRIM29	Q14134	588 aa		13.39	□□□□□ -0.27
WDR59-223	ENST00000616369	WTAP	Q15007	396 aa		13.39	□□□□□ -0.27
WDR59-223	ENST00000616369	CAVIN4	Q5BKX8	364 aa		13.39	□□□□□ -0.27
WDR59-223	ENST00000616369	TBC1D9B	Q66K14	1250 aa		13.39	□□□□□ -0.27
WDR59-223	ENST00000616369	BICDL1	Q6ZP65	573 aa		13.39	□□□□□ -0.27
WDR59-223	ENST00000616369	DRC7	Q8IY82	874 aa		13.39	□□□□□ -0.27
WDR59-223	ENST00000616369	SDR42E1	Q8WUS8	393 aa		13.39	□□□□□ -0.27
WDR59-223	ENST00000616369	SLC26A6	Q9BXS9	759 aa		13.39	□□□□□ -0.27
WDR59-223	ENST00000616369	RNF41	Q9H4P4	317 aa	Predicted RBP	13.39	□□□□□ -0.27
WDR59-223	ENST00000616369	RAI14	Q9P0K7	980 aa		13.39	□□□□□ -0.27
WDR59-223	ENST00000616369	KIAA1468	Q9P260	1216 aa		13.39	□□□□□ -0.27
WDR59-223	ENST00000616369	MAGEB6P1	A0A0J9YX57	407 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	ERICH2	A1L162	156 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	UBE2Q2L	H0YL09	131 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	WDHD1	O75717	1129 aa	Predicted RBP	13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	ZNF202	O95125	648 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	CMA1	P23946	247 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	CDC25B	P30305	580 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	GNL2	Q13823	731 aa	Known RBP	13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	SLC10A5	Q5PT55	438 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	CCDC186	Q7Z3E2	898 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	DHX40	Q8IX18	779 aa	Known RBP	13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	CEP57L1	Q8IYX8	460 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	STK11IP	Q8N1F8	1099 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	CELF1	Q92879	486 aa	Known RBP	13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	BCL2L12	Q9HB09	334 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	NRBP1	Q9UHY1	535 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	TAOK2	Q9UL54	1235 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	MROH7-TTC4	A0A0A0MT08	1334 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	UQCRHL	A0A096LP55	91 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	BECN2	A8MW95	431 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	PPP6R2	O75170	966 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	UQCRH	P07919	91 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	PFKFB1	P16118	471 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	GTF2E1	P29083	439 aa	Predicted RBP	13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	MARCKS	P29966	332 aa	Predicted RBP	13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	PTPA	Q15257	358 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	SMIM5	Q71RC9	77 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	TMTC2	Q8N394	836 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	WASF1	Q92558	559 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	FAM84B	Q96KN1	310 aa	Predicted RBP	13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	MAP3K14	Q99558	947 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	RIOK1	Q9BRS2	568 aa	Known RBP	13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	CLIP2	Q9UDT6	1046 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	ANAPC4	Q9UJX5	808 aa		13.38	□□□□□ -0.27
WDR59-223	ENST00000616369	DUOX1	Q9NRD9	1551 aa		13.37	□□□□□ -0.27
WDR59-223	ENST00000616369	RCAN1	P53805	252 aa		13.37	□□□□□ -0.27
WDR59-223	ENST00000616369	VPS72	Q15906	364 aa		13.37	□□□□□ -0.27
WDR59-223	ENST00000616369	RTN1	Q16799	776 aa		13.37	□□□□□ -0.27
WDR59-223	ENST00000616369	PTF1A	Q7RTS3	328 aa		13.37	□□□□□ -0.27
WDR59-223	ENST00000616369	NAT10	Q9H0A0	1025 aa	Known RBP	13.37	□□□□□ -0.27
WDR59-223	ENST00000616369	DLEC1	Q9Y238	1755 aa		13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	MINDY4B	A8MYZ0	360 aa		13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	TOM1	O60784	492 aa		13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	GUCY1A2	P33402	732 aa		13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	NBPF11	Q86T75	865 aa		13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	JMY	Q8N9B5	988 aa		13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	MRFAP1L1	Q96HT8	127 aa		13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	NARF	Q9UHQ1	456 aa		13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	CCDC88A	Q3V6T2	1871 aa		13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	MMP1	P03956	469 aa		13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	SLC3A2	P08195	630 aa	Known RBP	13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	SEC23A	Q15436	765 aa		13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	RC3H1	Q5TC82	1133 aa	Known RBP	13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	TRIM22	Q8IYM9	498 aa		13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	ZNF654	Q8IZM8	581 aa		13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	AOPEP	Q8N6M6	819 aa		13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	ZNF384	Q8TF68	577 aa		13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	ESR2	Q92731	530 aa		13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	UBAC1	Q9BSL1	405 aa		13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	NYX	Q9GZU5	481 aa		13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	HPSE	Q9Y251	543 aa		13.36	□□□□□ -0.27
WDR59-223	ENST00000616369	NHS	Q6T4R5	1651 aa		13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms